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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000043_pilon:390756..395583+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_008597 ID=XLOC_008597|Name=XLOC_008597|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4828bp|location=Sequence derived from alignment at sc0000043_pilon:390756..395583+ (Clytia hemisphaerica_ch_hm2_pilon)
ACTGGATGGACTTTCTTTCCAGCTGTTTGTGTTGGAAACAGTTCCATTTC
TATCACTACCCAACATTTTGTCACCATGGAAACCGACGTAAAACTATGGC
TGGAAAGCATCTTTGATAATTACCCAATCGTTCAAATCGCTCAAAAACCA
ACTTCACTCGATCAAGTCCAAAAACTTTTGAAGATTATCGTGTTTTCGAT
TCACGTTTCCAAGAAAGACCTCGTAGCACCAATAACCAGCTCAAACTGGG
TGGAGTACATCCGAAACGCCATCGAAAACGTTTCAACGAGTGACAATATC
CTATTTTATTCCAATCAACAAATGGCAGCACTGAATAGCAACGATCCCCG
CTACAACAAATTGTTCATTTGTGGGCCGTTTGGAACGGGAAAAACAATTC
TGCTCCGGCATAAAGCAATCCAGATAAACGAAAAACCTCAATTCAAAGGG
AAAGTCATGTATTTAACTGGAGATGAATATTTACGAGGAACACTGAACAG
CATGCTTTACCATCGCATGAAGGTTGAATTGGAGGAGAAGAATGGAATAT
TTGTCATGGAGATCAGCACTGGTGTAAGTAAATTTTTCTCTCATAACGGA
ATAGTAACTCTGACTCTCAGTGAAATGATATTGCGAAACTAGAgaaaatt
ttaatatatttattCATCGTTCAACAAttatagaaattcaaatttaacaa
aagaaaattcttgaaagctCTATGAAAAAACTcataaaatcctttttttt
acatAGTTTATGTATGGTGACATTGATGATGatgaggaggaggaggagga
ggaggaggaggaggaggaggaacGTGAACGCAAGGAGGCGATGAAGGAAT
GGGAACATGAACGAATCCTTCAAAAGATTATTCAACATGGTATCAAAGCC
GTCTTCTGTGACGAGTTCGACATTTTTGGTCACGATGACTTGATAATGAA
AATGATGGAGATGCTCGATTACTTGTGGATCGTTCCATCGACGGATGTTT
TGTCTTTGAGCGATATAGGAGGTTGGGAAGGCAAATTCACTATTCTCGAT
CTCTATCGAAATTTTCGCAATTCAAGGGAGATCGtgaaatcaatcaaatc
atttgCTGAAGAGAAAAATTATCGGTACAAAGAAGGTATCGTCATGCCTC
CCAAAAACTTCCCCGCAGGTTGCTCACCGATCTTCGTTGACACCTTTAGA
GAAGCGATGGAAGAAGCACGAAATCGAACCAAGGATGGAATTTTAGTCAT
TAGTGATACTTTTAATATCGATGGCGTTACTGATTTGGATCAGATGAATG
AAGCATGGAAGAGGTACAGTGACCTACTAACAcaagatttcaaagaaaat
gagaaTCCGTACAAATTTCTTCAAGAAGGAAATGTTTTGATCGTTGAACC
AAGTTTTACGTACGGGTTTGAGTGGGAGACCGTTATTGCGAATGAATTGG
GATGGGGTGCATATGCAACTCACCACAAATGCAACTTTATGATGCGGTGC
ACCAGTAACCTCATCGTCGTGGaaaaaaaTCGTTAAAAGAGTAATATTTT
ATCAGCAGTTTATTTAAATGGACCAATTTGTTTAAAGCCTTTccatgttt
atttttttcaaatttctcaattcATTTTTCGAGTATGCTAAATGTTGAAA
TTCCTTCCATGAATAATCTTTATGGTTGTGGagtatttatttcaaatttc
tcgATTCATCAGAGAGTAGTACCAAAGTCTCACAATGAATAGTTTACACG
TCACgcataatttctttttaatgtgTATTTTTTCCTGGATATCTTTACTG
GTGAGCAAATTAcacttttctcattttttacttAAATTAAGTGTTTTTCT
AGTGCCCTTGACATTAGCTCGACCATTGACGAACGATGAACGAGTTAGAT
TTATTTTATGAGTAGAAAGTCTCAATTAACTTTTAATAACTTTTAATAAC
TATTGTTATTATTCTAATTTATGTTAattcaatcataaaaaaattcttca
aaagcaaATCTTTATTGATCTTGACTAGCACCCCGTGCTTGTTATTAACC
ATATTCTATTCAGATGCTTACAAAAAATACAAAGTCTCAAAGAAATAGTC
GATTCTGCTTTGTTCTTGACAGCCAAACTTTTCCAACGTTGTTCAGAATT
TACAATTAGACAATACCCAACCCTACTTTACCATTCattatcaaaaactt
tcaactgTCAAACAAGCCTTTGTAAAAAGCCTAATAAAGACGATTTGCTA
TTTCGAAAGTTCGAAGCACACTAGCCTCTCTATCACTCTTCTTCGTAATA
CGCTTGCAAGTGAAAAATCCGAggtgaaaattcttgaaaagatcTTATTT
GCGACCCAAgttcttcaaaagaaatttttaatagttatttgctTGAATAa
ggaattctttttctttttcgatcTTGAAAAACTTCATGATATGAAGTTCA
TTCTATGCCCTAACTATAATTACACGCTAGAAATCTAATGAGAGAGTGAA
AAACCTTTCAAAGACCTCGAATTACCATCGGAAATTTGACGATAACTTTC
TATTTGACCGAAAAAAGGGGAGATTATCGAATTACAGAGCGTCGAATTAG
ATGACGTCACCTGTCGAATATATACGAGAATATAACGAATCTTAACTTTT
CGTTATAGGACATCGTCACAAGAACAGTTAAAAATATAAAGTGTTTTCAG
TATAGTAGCTTAATTCCTGTTGTCAAAACAGGCTACacggtttttataag
aaaatccaaagtttttgaagccttcaaatctttttaactttttgattttt
aagcataaaaatgttcttgacatgttcttattttcgccatttttcgaGTA
GTTTGtccatttcctaagaaattgaatgttttagagtctgtgaaacctta
tgttcttaacttgttcttaatatttcggccatcgaagccttatgttctca
tatagcttgttcttataaaaaacgtgtattcttctGTCTTCTTCTGTCAG
TTTTTCTCTTAAAATGTATTCCAGCTACAACAAAACAAGCGAGGAATATT
TTTGGCATTgtgcttgttcttataaaaaacacctTCGTTTGGCAAGATAA
ACACTGTCTCAAATAACTATCATTTTGCTTGCTTGCGTCAATgatgcaaa
ataaacaaaatgtaaaaaatgtatGAGAGAGAGAGTATTGGTATGAAGAA
ATCTTTGTGTAAGTTCTAAAAAGACTTTTTGTGtaatttgttttgaactt
gGTATATGAAACGAGATGGCGAGTATAAGTGGTGTCCAAACAATCGCGCA
GAAATTATTGTTGTTGCAACCAAAACCAATCGATCCTTTAAAGTGTGATC
CAAATAAATCGTTATACTGGCAGATTATCAAGAACAACCAAACTGTATCG
AAGCGACAAGCAAAACAATTTAATTTGGGGAACACCCTTACGTTTAATGA
CCCGATCAAAGCTGCCATGTTTCTCATTCAAAGAGAATACGGCGAGTCTT
CACTTTTCAAGAACGATTTACACGAGGCTGTCTTCATACCTCCAACGTTT
GTTTCACAACAATATGCCAAGAAATCAACCGTTGCTATTCTGGATTATGA
AGTCAAGAAGGATATTGAAAGAATTTTggtcaacttgaaaaaaaattcac
cagGACACTGGATGAAGATGGAATTAGATAATTTCATACAGACACAAAAT
GGTGCTGATCGTATTGACAAGAACGCGTTTGACAAATGGATAGTGAACCT
CAAAATCCTGTATTTGGTTATTGACGAGTTCAAAACGGACCACGACAAAC
TACCAGCAACTACATCAGACCTGGGAGTCTTCGTTCAAGGGTGCATCAAC
GAACTTCCTTCGACATCGCCAGAGCCAGAGCTTAAAGCCTTTCTACgcga
atatcttttcaaaaagaatttcaaaaagctgTTAAAACGGAAGATCGAGG
AGAACAAGACACATGATACGAATCTTCGATGGCTTTTCGATTTGGAGTTG
TCAGAGCTCGGAGAGCATGTTGAACACTGGTTTTATAATCAAATCGTACC
GCTAAAAGATGACATTCTCCAAGACACAGTTGTTCTTTCATCTGTCAATT
TTCTGACAAATGTTCGAAACAAGATGCATAAAGAAGCAGACTTTTTGATC
ATCTCATGGCAAAGAAAACTCATCATTTCCGTAGAGATGAAAAGCGAACT
CAAAAACGATCGAGTTTTCGAGCAGTTAGATTCGAACCATCAGCTATTCG
AGGAAAGACTGGGAGATCAGCTGGAGCCTGGATGGACTTTCTTTCCAGCT
GTTTGTGTTGGAAACAGTTCCATTTCAATCACTACCCAACATTTTGTCAC
TATGGAAACAGACGTAAAACTATGGCTGGAAAGCATCTTTGATAATTACC
CAATCATTCAGATCGCTCAAAAACCAATTCCACTCGACCAAGTCCAAAAG
CTTTTGAAGATTATCGTGTTTTCGATTCACGTTTCCAAAAAGGACCTCGT
AGCACCAATAACCAGCTCAAACTGGGTGGAGTACATCCAGAATGCCATCG
AAAATGTTTCAACTAGTGACAATATCCTATTTTATTCCAATCAACAGATG
GCAGTACTGAATAGCAACGATCCCCGCTACAACAAATTAATAATTTGTGG
GCCGTTTGGAACaggaaaaacaattttgctCCAACATAAAGCAATCCAGA
TAAACGAAAAACCTCAATTCAAAGGGAAAGTCATGTATTTAATTGGAAAG
AGATTAGTTGTTGGAAAACTGAACACCATGCTTTACCATCGCATGAAGGT
TGAATTGGAGGAGAAGCATGGAATATTT Coding sequence (CDS) from alignment at sc0000043_pilon:390756..395583+ >XLOC_008597 ID=XLOC_008597|Name=XLOC_008597|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1278bp|location=Sequence derived from alignment at sc0000043_pilon:390756..395583+ (Clytia hemisphaerica_ch_hm2_pilon)
ACTGGATGGACTTTCTTTCCAGCTGTTTGTGTTGGAAACAGTTCCATTTC
TATCACTACCCAACATTTTGTCACCATGGAAACCGACGTAAAACTATGGC
TGGAAAGCATCTTTGATAATTACCCAATCGTTCAAATCGCTCAAAAACCA
ACTTCACTCGATCAAGTCCAAAAACTTTTGAAGATTATCGTGTTTTCGAT
TCACACTGGATGGACTTTCTTTCCAGCTGTTTGTGTTGGAAACAGTTCCA
TTTCTATCACTACCCAACATTTTGTCACCATGGAAACCGACGTAAAACTA
TGGCTGGAAAGCATCTTTGATAATTACCCAATCGTTCAAATCGCTCAAAA
ACCAACTTCACTCGATCAAGTCCAAAAACTTTTGAAGATTATCGTGTTTT
CGATTCACAATTACCCAATCATTCAGATCGCTCAAAAACCAATTCCACTC
GACCAAGTCCAAAAGCTTTTGAAGATTATCGTGTTTTCGATTCACGTTTC
CAAAAAGGACCTCGTAGCACCAATAACCAGCTCAAACTGGGTGGAGTACA
TCCAGAATGCCATCGAAAATGTTTCAACTAGTGACAATATCCTATTTTAT
TCCAATCAACAGATGGCAGTACTGAATAGCAACGATCCCCGCTACAACAA
ATTAATAATTTGTGGGCCGTTTGGAACaggaaaaacaattttgctCCAAC
ATAAAGCAATCCAGATAAACGAAAAACCTCAATTCAAAGGGAAAGTCATG
TATTTAATTGGAAAGAGATTAGTTGTTGGAAAACTGAACACCATGCTTTA
CCATCGCATGAAGGTTGAATTGGAGGAGAAGCATGGAATATTTAATTACC
CAATCATTCAGATCGCTCAAAAACCAATTCCACTCGACCAAGTCCAAAAG
CTTTTGAAGATTATCGTGTTTTCGATTCACGTTTCCAAAAAGGACCTCGT
AGCACCAATAACCAGCTCAAACTGGGTGGAGTACATCCAGAATGCCATCG
AAAATGTTTCAACTAGTGACAATATCCTATTTTATTCCAATCAACAGATG
GCAGTACTGAATAGCAACGATCCCCGCTACAACAAATTAATAATTTGTGG
GCCGTTTGGAACaggaaaaacaattttgctCCAACATAAAGCAATCCAGA
TAAACGAAAAACCTCAATTCAAAGGGAAAGTCATGTATTTAATTGGAAAG
AGATTAGTTGTTGGAAAACTGAACACCATGCTTTACCATCGCATGAAGGT
TGAATTGGAGGAGAAGCATGGAATATTT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000043_pilon | genome | sc0000043_pilon:390756..395583 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 205-639:4394 |
| Aaloc | 1-204:1 |
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