XLOC_016162 (mRNA) -

Overview
NameXLOC_016162
Unique NameXLOC_016162
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000019_pilon:1607898..1608631-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_016162 ID=XLOC_016162|Name=XLOC_016162|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=734bp|location=Sequence derived from alignment at sc0000019_pilon:1607898..1608631- (Clytia hemisphaerica_ch_hm2_pilon)
ATCACCTTCACGGGCGGGAATGGCATGGTGGTGACCGTGTCACTGCCCAG AAGTTTAATCAGCTGAAAAAATGCGGTTTACTACCAGCCAACGCTGTTCC AACCTTACAAGATCAACCTGCTAAGGTCACTCCATCTTCGAAAAGTCTAG CTACAAGCCAACAGTTGATTACCTTCACGGATAAGAATGGCGCGGAATTA ACCGTCACTTCAAAGAAGTTTAATCAGCTGAAAAAATGCGGTTTACTACC AGCCAACGCTGTTCCAACCTTACAAGATCAACCTGCTAAGGTCACTCCAT CTTCGAAAAGTCTAGCTACAAGCCAACAGTTGATTACCTTCACGGATAAG AATGGCGCGGAGGTGACCGTTACTTCAAAAAAGTTTAATCAATTAAAAGA GTGCGGTTTACTTCCGCAAAACGCCATTTTACCCTTACAAGATCGACCTG CTAAGGTCACTCCACGTTCGAAAAGTCAAGCTACAAGCCAACAGTTGATT ACCTTCACGGATAAGAATGGCGTGGAATTAACCGTCACTTCAAAGAAGTT TAATCAGCTGAAAGAATGCGGCTTACTTCCACACAACGCCATTCCACCCT TGCAAGATCTGTCTACCAGGGTCGGTCCAGCTTCACAAAACGTGTCGAGC TCAGTCACAGAAGAATACATTGAGCTGAACCAACACGAAGAAAACAAAAG TGAAGACGCAAAATCACTTCAAGCCCTCCCTTGA

Coding sequence (CDS) from alignment at sc0000019_pilon:1607898..1608631-

>XLOC_016162 ID=XLOC_016162|Name=XLOC_016162|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1468bp|location=Sequence derived from alignment at sc0000019_pilon:1607898..1608631- (Clytia hemisphaerica_ch_hm2_pilon)
ATCACCTTCACGGGCGGGAATGGCATGGTGGTGACCGTGTCACTGCCCAG
AAGTTTAATCAGCTGAAAAAATGCGGTTTACTACCAGCCAACGCTGTTCC
AACCTTACAAGATCAACCTGCTAAGGTCACTCCATCTTCGAAAAGTCTAG
CTACAAGCCAACAGTTGATTACCTTCACGGATAAGAATGGCGCGGAATTA
ACCGTCACTTCAAAGAAGTTTAATCAGCTGAAAAAATGCGGTTTACTACC
AGCCAACGCTGTTCCAACCTTACAAGATCAACCTGCTAAGGTCACTCCAT
CTTCGAAAAGTCTAGCTACAAGCCAACAGTTGATTACCTTCACGGATAAG
AATGGCGCGGAGGTGACCGTTACTTCAAAAAAGTTTAATCAATTAAAAGA
GTGCGGTTTACTTCCGCAAAACGCCATTTTACCCTTACAAGATCGACCTG
CTAAGGTCACTCCACGTTCGAAAAGTCAAGCTACAAGCCAACAGTTGATT
ACCTTCACGGATAAGAATGGCGTGGAATTAACCGTCACTTCAAAGAAGTT
TAATCAGCTGAAAGAATGCGGCTTACTTCCACACAACGCCATTCCACCCT
TGCAAGATCTGTCTACCAGGGTCGGTCCAGCTTCACAAAACGTGTCGAGC
TCAGTCACAGAAGAATACATTGAGCTGAACCAACACGAAGAAAACAAAAG
TGAAGACGCAAAATCACTTCAAGCCCTCCCTTGAATCACCTTCACGGGCG
GGAATGGCATGGTGGTGACCGTGTCACTGCCCAGAAGTTTAATCAGCTGA
AAAAATGCGGTTTACTACCAGCCAACGCTGTTCCAACCTTACAAGATCAA
CCTGCTAAGGTCACTCCATCTTCGAAAAGTCTAGCTACAAGCCAACAGTT
GATTACCTTCACGGATAAGAATGGCGCGGAATTAACCGTCACTTCAAAGA
AGTTTAATCAGCTGAAAAAATGCGGTTTACTACCAGCCAACGCTGTTCCA
ACCTTACAAGATCAACCTGCTAAGGTCACTCCATCTTCGAAAAGTCTAGC
TACAAGCCAACAGTTGATTACCTTCACGGATAAGAATGGCGCGGAGGTGA
CCGTTACTTCAAAAAAGTTTAATCAATTAAAAGAGTGCGGTTTACTTCCG
CAAAACGCCATTTTACCCTTACAAGATCGACCTGCTAAGGTCACTCCACG
TTCGAAAAGTCAAGCTACAAGCCAACAGTTGATTACCTTCACGGATAAGA
ATGGCGTGGAATTAACCGTCACTTCAAAGAAGTTTAATCAGCTGAAAGAA
TGCGGCTTACTTCCACACAACGCCATTCCACCCTTGCAAGATCTGTCTAC
CAGGGTCGGTCCAGCTTCACAAAACGTGTCGAGCTCAGTCACAGAAGAAT
ACATTGAGCTGAACCAACACGAAGAAAACAAAAGTGAAGACGCAAAATCA
CTTCAAGCCCTCCCTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_016162XLOC_016162-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000019_pilongenomesc0000019_pilon:1607898..1608631 -
Properties
Property NameValue
Aaloc208-903:697
Aaloc172-207:735