|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000272_pilon:338578..343172+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_017285 ID=XLOC_017285|Name=XLOC_017285|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4595bp|location=Sequence derived from alignment at sc0000272_pilon:338578..343172+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGAATCATAGAGAAGCTCCGTGAATCGATTCCATGCGTCATCTCCAG
ACGAACATCGTTCATCACCATGACAATCCTACTTGGATCTTTCTTCATAG
TGGAAATGGTTGTCGGTTATATCACCAACTCCATGGCTTTGATCGCTGAT
GCCTTCCACATGTTAAGCGATGTCGCTTCATTGGTTGTCGGATTTTTGGC
GTTGCAATATTCAACCATGAAAGCACCAAGTGAAGTGTATACGTATGGGT
ACGCCAGAGCTGAGGTGCTGGGAGCACTGGTCAACGCTGTGTTCCTGGTA
GCTTTGTGTTTCTCCATTTTCATCGAAGCGTTAAAGAGACTTGTTATCTT
GGAGGAGATTGAGAATCCGGTGTTAGTGTTGATTGTCGGTGCTATCGGGC
TAGTAGTCAATTTGTTCGGCATGCTTTTGTTTCATCAGACGGGACATGGT
CATTCCCATGGTGGGTTATCACATTCGCACTCGCATGGTGGTGGAGGGGA
TTCCCACGGTCATTCGCACACGCACGCACACGGCCAAGGTCATGGTCAAG
CCCGTCCTCCCTTGATGATTCCCAAGACACAAGATAAACAAGAGACAGAT
ACTAGCGTATTCGACCCATTAGATGATGGAGTCAAATCTCATAGCACACC
GGTCAATAAAGGACCAACACCGGAACTAAGTAAATCTAAAGATTCTTTTA
CTCCAAGCCTTGAAGATGTGCCCGAGGAGAAACCAATTGAAcaaaaacta
atcaatgaagaacaaaagacaaaaataaagACATGAATTTAACAGGCGAA
AGTACAGTTTCCATCCCTTGTCACAACAGTCATAATACGAGTCGCCATTC
GAAATGCACGAACGCATCCAGTGAAGCTTTCAACAGGTCGCATATCAAAA
ACATATCAAGTAAGTCAACAATTACCAGTAATGGAGGGTTCGAGTTTTGA
TTGTTTCATATAGAAAGATTTGTTGGAGTTTGGACATCCATGAGGGGGGA
TCAGGACGACACTGGTGCTTCTTCACCTGCCTCCAGAAAGATTGGTCTCT
GATATTACCAGTTAGATATAGCGGAAGGCCAGAAAAACATGTAGGCAACC
GTAGCATAACGGGAGAAAAACCAGCTACGATGGGTGAAGTTTTGGGTCCG
AATCACAGCCGGGTCATGCCAAAGATTCCAAAATGGTACCTGATGCCTAA
CTGCTTGATTTTTAGAGAAATGTATTGCCATTAAAGATGTTTAGGGAGGA
tgtgatatttcaaaaaaaaaccttCCGAAATTCCCAACCTTTACAACGAC
TAGCTTTCCcaaaattttaaagtatttATGGTACTTTCAAATATCTCCAA
AAGAGATTCCTTGGTAAGGTAAGCttttttttACCACGTGAACTAGTAAA
TACTAGTTCAATTATTTCAGAAACAAGCCAAAAAGGCATCTGGTCAACAC
ATCATAAAATACACATATCAACCCTTTAGCGTCACGGTCTGcttaaagag
aatttttttttaccataaGAAAAAGcggtcttataaaaaaaatttaagat
acCCTTTGAGAATAgtttgcactccatcgcagagccAGAGGCCCAAGAAA
AAGTCTTATATGGCATGGGAGCTTTGGCGAGAATTTGATTGGTTTGTCTT
GTGTAAAAAGCCGACTGCACCACTAAGGGGAGGTAGGTGTCAACGGAACG
TGTAAAACAGGTGAAGTAGGGAATCATACCTTTCTTTTTCCATTCTCTAC
AGCGGCCGAAGATGCAGAAAAGAATAACCATCGTTTCCCAACCAAATTCA
AATCAGCCGGACAATTAAACATCCATGCAGTGTACCTTCACATTTTGGGC
GATGCATTGGGAAGCATCATCGTCATGCTGTCCGCTCTTATTATCATTTA
TGCTGAAGGTGAGTGAGAAGAATGATGCGTTTGTATTAGAacacccccgt
gtcacagacccactgggaccccagcccaatgaagtataagcccgaagcca
acaaatcctaccaaagatgCGCAGCTAGGGGcggcccgcctggtttttaA
ACAAATGCCAAATTGAAACTAAactttaccgctaaatttcgaaaaaaata
tcactcaaTCCGGCATAAATAATACGGCGCATATtcaaaggcttcacttt
ttcttgcctgagaaatgttatagattcgcttctagcccttcgcgCTTAGA
CTTCATTGCCCCAGCCCCACTATGAAAttgggcaaaaatttcgtccccgg
tgagaAAATACCCTGGAGTTTCAGCTCCATTGGCAAATTGGCTTtgattg
cactccaaaaccatccccactggattttttagccTTGGAACAAAATAATT
ACTTTCCCCATTTGGATTTCAATATAAGTTTTTATAACCGCCGAAAGTAa
cttccactggggctgtgagacaggggtgtattaaggGATCCTGTTTCACG
TTGACTGGACCTTGACCTTTGTTATTAATCTTTCTCAAACACCAACACCC
CCTTATGGAATATAAAGCGTAGTGGTAATCGTACTTGCCTTCCGTGCGGA
AAGTCCAAGTTCAATTATTACTGTAagggccagggcaaaccagtccaaca
tttcTTCCAACGTGATTTGTTGTTGGATgctggatgaaatgtttgatgga
aaaacttggGTCGGATGAAGCGAAAATCAAGGccggggcaaaccgatcca
acattttATCTGACATAACTtggaataaaatgaaattcaaaaaataaaga
aaaaagtaccaccaaaccaatccaacgaaaaattacacaattcaatgaga
gagcttctttgatctcaccgcaaatgttggatgaaatgtttgatggcgat
caaacttcatccaacaccgtccaacatgatttttttcttctttttttgaa
ttttcatatttttctaacaATTTGATTTGACGCAAACCGGTCAGAAAAaa
ggcatgttggatgaaatgttgaatCGGTTTACCCTGGCCTTAATACTACG
GCTCATTTGGCAAGTGGGCGTACCTTCTTCTCGGGCAAACTATACTGAAG
CTCTCTCTaacgttttgtataagatatcTTTGATCACCCGCATTCCAGTA
ATCCATAAGAATACTTACAAATGATTTTCGTCACCACAGGTACATGGACG
TTATACGTGGATCCAGGAATGTCTATTATAATGGTTGCCATCATTTTGAA
GACATCAATCCCACTGTTAATCGAGACAGCAAAGATCTTGATGAATTCTG
TTCCACATCACATACAAATCAACGACCTAAAGAAACGATTAGTTGAACAA
ATCAAATGCATACACAACGTTCATGAACTCCACGTGTGGCAATTAGctgg
tgaaaaaattatcggTAATATATTTGTAATGTTTTTCACTTTTGCATCCG
AAATTCCTACAGAAATTATCGTTGAAACGCGTTCAAGGTTCATTTGAATC
CTCGAGGGCTGTGTTTCAAAAGAATTCACGTTTTTGCCAACAAAAAAGAT
TATGGAAAATGTGTTGGTGCGTATGTTCAAGACTATCAAAGTTTACACAA
CTTTTTCATAcacaactccaattttcggggaGTCCtagggttgcttagca
ttctaacTCATTTTCTGATGAgcttgctttgaccacccctgatatcatat
aataatttatgcttattggggcAATAGCTATCGTTTGCCATGCTTAGATT
gcctaaaaagcttttactttgcttctgagaaaaatttggcaaatttgaaC
CCTCGAACCTTAGCAACCtggtttcttattaaaaaatgtgaaaataaggA
TATTTCAATAAACCAGGCCTTTCAATTATCGcctttcctgtaccacccca
aATGCCCAtatttacttttgagatgagtCTTGCCTTACTTCGCATATGTC
TTTTCCGCGGAGAAGACTTTggtatctggcacccagatggtgaaattttc
atccgacacgctaaagctctaaaggtcgggaaaattttcaacacctggaa
ggtttacattacagAATTTTACGAGACCGCGtaaagaattttgcagcggg
aggtctggtaacccagccctcgttttcggggattgacgggtccaaccgaa
atattcaTGGGTTTACACGTAACACCCGACTGGgaatgcggcacatcaaa
ggccgactatcattcctctccggaaattggcccgctcctttagagcttta
gcgtgggcggccgccaatacgccatcggaatatcagataaaagaCTTTGG
TACAGGCTATATTGTTGTCTTGATTCAActgttttctattttgattgtca
actatttttttaaatttaaatgtcTTTTTCATTAAATGTCTTTACCAGTT
CTCTTTATTTCACTTCGACAGCTTCTATGCACGTCAAGCTTAAACACCCA
TTCGATTACGAATTAACATCGAACCGAATCAAAGAGTTTTTCCACGATAA
TGGTATTCATTCGACCACTATACAAATCGAATTCGATCGAGTCGATGACA
TTGATCGAAGAGGACCGTGTATGGTCGTGTGTTCACTCGATTCCGCTTGC
GATGAAATGATGTGCTGTAAACCCTCGCATTCAACGTTCGATTGA Coding sequence (CDS) from alignment at sc0000272_pilon:338578..343172+ >XLOC_017285 ID=XLOC_017285|Name=XLOC_017285|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3028bp|location=Sequence derived from alignment at sc0000272_pilon:338578..343172+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGAATCATAGAGAAGCTCCGTGAATCGATTCCATGCGTCATCTCCAG
ACGAACATCGTTCATCACCATGACAATCCTACTTGGATCTTTCTTCATAG
TGGAAATGGTTGTCGGTTATATCACCAACTCCATGGCTTTGATCGCTGAT
GCCTTCCACATGTTAAGCGATGTCGCTTCATTGGTTGTCGGATTTTTGGC
GTTGCAATATTCAACCATGAAAGCACCAAGTGAAGTGTATACGTATGGGT
ACGCCAGAGCTGAGGTGCTGGGAGCACTGGTCAACGCTGTGTTCCTGGTA
GCTTTGTGTTTCTCCATTTTCATCGAAGCGTTAAAGAGACTTGTTATCTT
GGAGGAGATTGAGAATCCGGTGTTAGTGTTGATTGTCGGTGCTATCGGGC
TAGTAGTCAATTTGTTCGGCATGCTTTTGTTTCATCAGACGGGACATGGT
CATTCCCATGGTGGGTTATCACATTCGCACTCGCATGGTGGTGGAGGGGA
TTCCCACGGTCATTCGCACACGCACGCACACGGCCAAGGTCATGGTCAAG
CCCGTCCTCCCTTGATGATTCCCAAGACACAAGATAAACAAGAGACAGAT
ACTAGCGTATTCGACCCATTAGATGATGGAGTCAAATCTCATAGCACACC
GGTCAATAAAGGACCAACACCGGAACTAAGTAAATCTAAAGATTCTTTTA
CTCCAAGCCTTGAAGATGTGCCCGAGGAGAAACCAATTGAAcaaaaacta
atcaatgaagaacaaaagacaaaaataaagACATGAATTTAACAGGCGAA
AGTACAGTTTCCATCCCTTGTCACAACAGTCATAATACGAGTCGCCATTC
GAAATGCACGAACGCATCCAGTGAAGCTTTCAACAGGTCGCATATCAAAA
ACATATCAAATGGGAATCATAGAGAAGCTCCGTGAATCGATTCCATGCGT
CATCTCCAGACGAACATCGTTCATCACCATGACAATCCTACTTGGATCTT
TCTTCATAGTGGAAATGGTTGTCGGTTATATCACCAACTCCATGGCTTTG
ATCGCTGATGCCTTCCACATGTTAAGCGATGTCGCTTCATTGGTTGTCGG
ATTTTTGGCGTTGCAATATTCAACCATGAAAGCACCAAGTGAAGTGTATA
CGTATGGGTACGCCAGAGCTGAGGTGCTGGGAGCACTGGTCAACGCTGTG
TTCCTGGTAGCTTTGTGTTTCTCCATTTTCATCGAAGCGTTAAAGAGACT
TGTTATCTTGGAGGAGATTGAGAATCCGGTGTTAGTGTTGATTGTCGGTG
CTATCGGGCTAGTAGTCAATTTGTTCGGCATGCTTTTGTTTCATCAGACG
GGACATGGTCATTCCCATGGTGGGTTATCACATTCGCACTCGCATGGTGG
TGGAGGGGATTCCCACGGTCATTCGCACACGCACGCACACGGCCAAGGTC
ATGGTCAAGCCCGTCCTCCCTTGATGATTCCCAAGACACAAGATAAACAA
GAGACAGATACTAGCGTATTCGACCCATTAGATGATGGAGTCAAATCTCA
TAGCACACCGGTCAATAAAGGACCAACACCGGAACTAAGTAAATCTAAAG
ATTCTTTTACTCCAAGCCTTGAAGATGTGCCCGAGGAGAAACCAATTGAA
caaaaactaatcaatgaagaacaaaagacaaaaataaagACATGAATTTA
ACAGGCGAAAGTACAGTTTCCATCCCTTGTCACAACAGTCATAATACGAG
TCGCCATTCGAAATGCACGAACGCATCCAGTGAAGCTTTCAACAGGTCGC
ATATCAAAAACATATCAACGGCCGAAGATGCAGAAAAGAATAACCATCGT
TTCCCAACCAAATTCAAATCAGCCGGACAATTAAACATCCATGCAGTGTA
CCTTCACATTTTGGGCGATGCATTGGGAAGCATCATCGTCATGCTGTCCG
CTCTTATTATCATTTATGCTGAAGCGGCCGAAGATGCAGAAAAGAATAAC
CATCGTTTCCCAACCAAATTCAAATCAGCCGGACAATTAAACATCCATGC
AGTGTACCTTCACATTTTGGGCGATGCATTGGGAAGCATCATCGTCATGC
TGTCCGCTCTTATTATCATTTATGCTGAAGGTACATGGACGTTATACGTG
GATCCAGGAATGTCTATTATAATGGTTGCCATCATTTTGAAGACATCAAT
CCCACTGTTAATCGAGACAGCAAAGATCTTGATGAATTCTGTTCCACATC
ACATACAAATCAACGACCTAAAGAAACGATTAGTTGAACAAATCAAATGC
ATACACAACGTTCATGAACTCCACGTGTGGCAATTAGctggtgaaaaaat
tatcgGTACATGGACGTTATACGTGGATCCAGGAATGTCTATTATAATGG
TTGCCATCATTTTGAAGACATCAATCCCACTGTTAATCGAGACAGCAAAG
ATCTTGATGAATTCTGTTCCACATCACATACAAATCAACGACCTAAAGAA
ACGATTAGTTGAACAAATCAAATGCATACACAACGTTCATGAACTCCACG
TGTGGCAATTAGctggtgaaaaaattatcgCTTCTATGCACGTCAAGCTT
AAACACCCATTCGATTACGAATTAACATCGAACCGAATCAAAGAGTTTTT
CCACGATAATGGTATTCATTCGACCACTATACAAATCGAATTCGATCGAG
TCGATGACATTGATCGAAGAGGACCGTGTATGGTCGTGTGTTCACTCGAT
TCCGCTTGCGATGAAATGATGTGCTGTAAACCCTCGCATTCAACGTTCGA
TTGACTTCTATGCACGTCAAGCTTAAACACCCATTCGATTACGAATTAAC
ATCGAACCGAATCAAAGAGTTTTTCCACGATAATGGTATTCATTCGACCA
CTATACAAATCGAATTCGATCGAGTCGATGACATTGATCGAAGAGGACCG
TGTATGGTCGTGTGTTCACTCGATTCCGCTTGCGATGAAATGATGTGCTG
TAAACCCTCGCATTCAACGTTCGATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000272_pilon | genome | sc0000272_pilon:338578..343172 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1294-1515:4374 |
| Aaloc | 1069-1290:3142 |
| Aaloc | 913-1065:1755 |
| Aaloc | 769-909:768 |
| Aaloc | 1-765:1 |
|
