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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000462_pilon:43907..50550- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_023568 ID=XLOC_023568|Name=XLOC_023568|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6644bp|location=Sequence derived from alignment at sc0000462_pilon:43907..50550- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACATCGACGATGTTTCAGATTTAGCCAAAACAGATCCTTTGATCCT
TGTCGTGGGGGCTAGAATTTACAATGGTAACAAGTCCAAAAGCGAAAAAC
TTAATGAAGTGGAGAAACGGGTGCGATCGACGATGAGGCTTTTAAGCCGG
ATCTTGCTAAAGTTCAGACAATCTTATGGGGAGAAAAAAGACCTTTCCGT
CGTCTTTCATATGACTAATTTAAAACACTTACGATTTGCCATCGAGGAGT
TAACAGAAAGTGAGGAAGCTATAAAGTCTGGATTAAAGGTGCAGATCCAG
AATGTCATCAAACAGTCTGCTAAAGTTTTAGAGGCGCACTTTCTCATCGA
GGGAAAATCACAAGAGGCTACTGATGTATGCGATTTCGTGAAAGTCTTTC
ACCTTGTGGAGGACGAAATTTTCAACGGGGCTCTTTATGCTATCAAACAG
AAAAGAAATAAAACAACGAGAAAACCAGCAAATCTTCCAGATGAAGACCT
TGTTCAGGAATTGAAGGCGTACATATTGAAAGTCACGCTCAAGTCCAACT
TCATATTTCAATCACCCAAAGACGTATTTGTTGATGTCAGAGATGCCGCA
TGTGCCCGCCTTACAATGTTTAACGGTCGCCGTGGTGGTGAGCCCGCACG
TCTTTACGTCTACCAATGGACTGAAGCCCTAAAAGGTGATTGGATACGTC
CAAAACTTAGAGAAGACTACATTGCTTCAGTGAAAACAAAAAATCGCATA
ACTTACCAAGAAGGGAAAGGATTAAAACAAGTTTGCGTTTTTTTCCCGCC
AGATTATGTGGATTCGCTGATCTTTTTATGTGACCCCGATGTCAGAAGAG
AAGTAGACACCCCAAAAACGAACACCTTTGTTTTTCCATCAACACAACAA
AGTAAAAATCACGTTGAAGGCTGGCACGCCCTTACCAACTCCTGTAAGAA
AGGTGGTATCACGTCCAAAATAAACGGTACGATGAATAGGCACAGGGTAT
CGTAACTAATTGGAGCATTCAACCTGTCAGAAACTGACCGCAATCTTGCG
TATGACCATTTTGGTCATAGCGAAGAAATGAATAAGTTTGTCTATCAAAT
TCCTCAGGCGGAGCAGCAGCTTCAAAGAACAGGAGAGTTTTTAACGATGA
TCGACAATAACCTAACCCCACCAGATGATATTCCCTCATCTTCAAGCACC
ATCACCAAGCCTACTGCCGTAACCAGTAGATCATTGGAAAATGTCCAACC
ATGCCAAGCTGACCAAGATAAAGACCACTTAAGTGGTATGTATCTAGAAT
ATGTGTAGCTCTTGATCCCATTTAGTATTTTTTAATTAGGATTGAAATGG
ATTGTAATTTAAATTTCCTTTCTTTGGAATGAAACAGGAGTAACGTTGCA
TCAGGCCGTTTTATTTCTCTAAGAGAGGTCAAGTTCTTTGCCTGACTGTT
TGTGTTCGTTTTTTTTCAGGTAAAGGAAGAAAATCCAAAAGGAGAAGGGC
AGCACCAGTATCCGATTCCGACAGTGATACAGACCCAATTCAAGGTAGAG
TTATTATTTGTTACTTGTGTTGCCAGTTTAGTTTACGTATCTCAATTCCT
AGGGATTGAATAGAGAAGAAATGTACATCTATTACTTTATTACCATGTAG
TCCTTGAGAATTAGGAGTCAATCTAGAAAAGGCTATTATAGAAGGTTTCT
GCTCATTGTCTGTCATTGTTTGCTCATTTAGGAAAAACAATTATGTCCTA
AAGAGTTAAATAGGGTCTTTTTAGGTAAGGAGCAATTCTTCAAATTATTA
ACGTCACAAGAGATTGCTTACCATGAAAAACCCTTTCACTCCTTGGGACC
TAACTGTTTTCTTCTCATTGGCGAAAAGATTAATGTCCAAAAAAGCGATG
GGGGTCTTTTTTAGGTAAGGAACCCTTAGAAACATGAACAACTTTTGAAA
ATCCTTTATTTGATTGTTCTATCTAATACATCCCTGTTTTTGTGCCCCAG
TGGGTGTCGAGCACCCAAAGATAGGTGGGTTTGGAAAATCTGAAATTCAC
TGAGGTGGAAGAAATTTTCTGAAAATTGAGTGGGGTACTTTAATGGGATA
AATTTTCAAATATTTCGCGGGAATTTATTTTCGCAGATGACTCAAATTTA
AATATTCTTTTGCAAAGTAATAACGATTTTGAGCAGTTTTTTCCTAAAAG
AAGCCAAAAATTCACCGATCGGACATTTTTCAAAATTTTTGCGGGAATTT
ATTTTCGCGGATGGCCATTTCCAGATTTTCGCGGGAATGAATTTCGTGGG
ACTGAATTTCGTGGATAGGGCCAAAATCTTCGAAATTTTATCCTATTATA
AAAGTAATCAAAATTTCCATGAATTTCACTGGGGTGCGGAAATTCTTAGG
CAAAGGTCGAGTGGGGTGACCCTTTTTGATGTGAAAATTTTACTGGGGTA
ATAGAAATAATCAGAAAATTTTGAGGGGTGTCTGAATTCTTCGTTATTTT
TGGGGTCATTTTCAGCAAAAAGATCCCAGTGAGGTGTAAAAAAATGGGCC
ATTTTGGGGAAAATTTTCCAGTGGGTGGTGAATTTGTAAAATTTTGTAAA
AAAGATCTTGAGAAACAGCCCAAATTGCCTGAAAAATCAGTACCTTTCTT
TTTGATGTCACACTTTTTAAAAAGAATAAGCAATTGAACACTTTCAACAG
AGAGAGAAAATTAGAAGTTTGGTCAACTGTATCCCCTGAAATTAACGAAA
AGCCTAAAGATTCGCCATATTGCAAGATGACATCATCTCCTTATACTTAA
AAAGGCTCATTTAGGATTATAAGACGTCCCTTGAAGAGTACTTCATGGTC
TAACTCTGATTCTAATATAGTATATAACCGTCTTAATGTTAACTTATTTA
TCAAGCACCACACTGTTCCTTTCTTCTTTCAGTCAAAAGATCATTCAAGT
GGAGTGCGGCTTTGTCAAAAGAATTTGAAAAATCATTTATTGGTTATGTA
AATCGCACTGAAAAAAAATCTACTCCAAGTAAGTTTTATGTATTTAGTTT
CAGCGATTATTTTAGGGGTCTCTTCGTTCTTGACCTGTAATCCTCCGCCG
TGCTCAATCGTGGAAGGGCGGAGGTCACTCTGGGAGAAAGTTGTCCACAA
AGTCGGAGGGGGTCATAATATGGTGCGTTTAGTGTGATTAAACCCAGAAG
TTACCAACAAATTTGGGTTTTGCAGTACTGTTGGACCTAATACCATTTAC
ATACATACATAAGTTCATCCGATCTTCATTTCGTTGACATGACAAAATTC
CATCTCTATAGTCAAGACTATTGTAGATTTTAGAGGCCACTTGGGTAAGA
CTTATACCACCACGGTAGTTGGTACAACGTGTTAAATCTCCTTTTTTTGG
TACAATAAATACCAATACCAGACAAATCCCATTCTTCAGGACGCACACCG
TGGAAGGTTTTAATGCAAAACTTTATCAGGTCTTTTCGGGTGTTCTTTAG
CTTTCAGACTTCGAGTATAAGACCATCCATCAAGACCTTGAGCGTTGTTA
GGCTTTATTGCTTTGAGAGTCTCTGGATCTCGTCCTCTGTAAATGCGGCT
ATATTCCTTTATTAGATTCCAGACATTCTTTGGATTCCCACTAGGTCGTT
TTTCAAATTCTGAGAGGGTTTTGTTTAGCCTAGCATCTTCAAGGTGGACG
AATGTCTGGCGTTGGGTGTTTGGATGGAGTTGTATTGGGTGAGTCTTTGA
TTGGGAGAGATCCAAATCATGGTGCTCAATGGTAAAGGGAGCTCGTTTTT
GGGCGATTCCAGTAGTTTCTCTATCCCGACTTCGTTACATATGGACAAAA
AAGATGTATATCACTGTTGATCGGTTGCTAGGCAAGAGATTGAATCGTCT
ATGACAGTGGCCAGATCATTGCCGTAGCGCATCGCTTAGCAATAAAGAGA
TTCTTTGATGGAGTTTTTGGAGCACAAAGACTCAGCCCGACCTTTGCTGT
TACGACGCTGTGATCAATAGTGGCAGAGGAAGTATGGGCAGTATGGACAG
TCGTTAAAACTATTTCTTCTGCGTTTTCTGAAAAGAATAGTCTATTTGAA
CGAGGTGCCCCGTATGATGTCTACATGTTCATAACATAGCTTAAGTTTCT
GAAAAGCTTGTTCCCTACCTAAAGATTGCTGTCGGAGGAGACTTTCAAAG
AACTCAGCATTACTGTTCTGTTCATGAATTCAGATATTCGAGTATTGAAG
TCGTCACCGACTAGTCACTGACTATCAGTTGATGTGGGATGGTTTAGTCG
AAACTAGGGTGACTGGTTGCTCGTAGAATGTTTCCACTTCTTCTAGGTTG
TGCAGGGAATAGCAACATATAATTACAGTTTTACGATTGCCTTTTAAAAA
AGCAACGAGGATTTGTTTGGCAACTTTTTTGATCAAAGTCAACAAAGCCA
ATATAGGTGTTTTTGAACAGTGATTCCAATGTCTCCCACGGTAGAATTGT
TACTGGTGTTATATGCCGATGCTGTTGCCTACATGTTCTTCTTTTATAAG
CATTATAGAGGCTTAGAATCGCTTCTTTAAACAATATAGATCTATTGTTT
GGGAACAAAAGAAATTAAGCATATTATTGCTGAGTGTCATCTCAAAATTT
TATATGCTTATAAACAAATAAACATGAACTTCATTTTCAGGCATGTAGGA
AAAAAATGATGACACTTTATGGCTAAAAATCATACCCTGTAAAAATTACC
ATTATAGATTTTCTCATACTCACAGAGGTGCAGATTACTCTCTTTTTTAT
TGGAGCTTTCCGGGATATTTGAGTTGAGCTTCATCTGTCCTTATTTTTGG
CGTTCAACCCTCGAATTGACTTTAACCATTTTCACGGTTTAATTCTTAGG
TCTGATGGTCCAATTTTTTTACTTGATTCTCAATTCGTCTAAGCATTTGT
GTTGAAGTTTTTATAAGATGCTCACATAATTGGTTATTCAAAACAATAGA
GATGACGCGTTCTTTAGAAAAATATAATAAAAGTTTTTGTTTGAAAAGTT
AACGACCAATCCAATGACAAAAATTCTTGTAAAATGTTCAACTTGACCCC
GTCTAAGCGCCCAATTCCCCGTTTGTTTAGTAAAATAAGTATGCAGTGCG
AACATACTTTTGTGTTGGACCTGCTTTAATGGGATAATATTTCGCGTGGA
TTAAATTTTGCGATTGAGCCTGTTCGCGAAATTTTAAGATTTTGTGAGGA
TTAAATTTCGCGAATAAAGGGCTTCCTAATTTTTCGCGGGGATTTAATTT
TGCGAATCAAAGTCAATTTGGTTTCTACCCTATGCAGCAGGTCTAACACC
AAAAAAACTGATGTTGGAAATCCTCAAACCCAGGAAATTCGAGTGTAACG
TCATTTACATATTCACGTACACATAAGCATAACCCCTCCCTTGTTTAGTA
CGTACCTTATCTGTGTACCCCCTTGAAAAAAGTACGTGATGTTTGTATTT
ACGTAAATGGTGGTCTAAGGTACTATATTTTGCCCAAAAAGAGATTTTCT
TATCATCCTTCCGGTCAGAATTCTTAACAAGTGCGGTAGGGGTGTATTCA
ATTTAGAGAAATTTTTGTGGCATTTAATTTTGCGGTTTGGGTGTCGACCG
CGAAATTAAATACCGCGAAAAGCAAAAAAACTTCAAATTTGACTCCTAAA
AGTAGAATTTTTAGGATCAAAAGTGCCCTCAACCGCGAAATTTTTAATTT
TCATGTCTTACCATAAGAATTTCAATCCCACAATTCTTTTAGAGTTAGAA
ATTCGTGGATTCGATTACATTTTCTTTGTCATTGAGTGTAATTAACCAGC
ACGAGAAATTAACGCAAAGTATGATGGCATTGAAATTCTATCAACCAGAA
GAATTGATGTCCATTTTTAGGGTGGTTTCACACTGAAAATTTCAAGCCAA
TAGGCTTAACGTGTATAATCATAAAAATGTTTTGTCAATAAAACAAATAA
AGTCTAGAAAAGAAAAGCATTTTTACTGCTTCTTGCTGGAATGCACGTGA
AGCGTTCAAGCGAAAGTAATTATTGCATTTGTTTCTTGGGGGAGGTTTCG
ATCCGCTTCAAATGTTGAAAAGCATGAGAGCAATTAAATGACTGTCCAGA
TTTCATCAACAAAACATGAGATGAGTTGAAAAGAACAAAATATTTTTGTG
AAGCCGGAATATTAATCACAGGTAAACTTTCTTTGGTGAAGAGAAAACAG
AGAAGCGAAGAGAATCAGTCCATGAGAGAATGTTGGTTCTCGCAAATACA
CTTGAGTTTACAAAGCGAAATGAATTACTCATTAGCTTAATCGTTTTACT
TGAAGTTTGTTTGAAACTTTCAAGCGATCGTGCCAATTTTATACAATAGA
AAACAAAAGATAGGATCGTGCACTCCTTTGTTACCAAAAGTTTCGAGCAA
CAGTGTGAAACCACCCTTAGATGTACGCTATTAAAAGTTATATCTTTATT
TCAGGTGAACAAGCAATGAAAGATTTTATGAAGACCAACGGGGTGGATGA
ATCTTTGTAGGGAAAAATCAAAATCTAGATTAACAACGAGCGGACCAAAA
TCGCAAAACGCGTAGAGGAGCGAAAGGCTGGAATGGAGTGCTAG Coding sequence (CDS) from alignment at sc0000462_pilon:43907..50550- >XLOC_023568 ID=XLOC_023568|Name=XLOC_023568|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3192bp|location=Sequence derived from alignment at sc0000462_pilon:43907..50550- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACATCGACGATGTTTCAGATTTAGCCAAAACAGATCCTTTGATCCT
TGTCGTGGGGGCTAGAATTTACAATGGTAACAAGTCCAAAAGCGAAAAAC
TTAATGAAGTGGAGAAACGGGTGCGATCGACGATGAGGCTTTTAAGCCGG
ATCTTGCTAAAGTTCAGACAATCTTATGGGGAGAAAAAAGACCTTTCCGT
CGTCTTTCATATGACTAATTTAAAACACTTACGATTTGCCATCGAGGAGT
TAACAGAAAGTGAGGAAGCTATAAAGTCTGGATTAAAGGTGCAGATCCAG
AATGTCATCAAACAGTCTGCTAAAGTTTTAGAGGCGCACTTTCTCATCGA
GGGAAAATCACAAGAGGCTACTGATGTATGCGATTTCGTGAAAGTCTTTC
ACCTTGTGGAGGACGAAATTTTCAACGGGGCTCTTTATGCTATCAAACAG
AAAAGAAATAAAACAACGAGAAAACCAGCAAATCTTCCAGATGAAGACCT
TGTTCAGGAATTGAAGGCGTACATATTGAAAGTCACGCTCAAGTCCAACT
TCATATTTCAATCACCCAAAGACGTATTTGTTGATGTCAGAGATGCCGCA
TGTGCCCGCCTTACAATGTTTAACGGTCGCCGTGGTGGTGAGCCCGCACG
TCTTTACGTCTACCAATGGACTGAAGCCCTAAAAGGTGATTGGATACGTC
CAAAACTTAGAGAAGACTACATTGCTTCAGTGAAAACAAAAAATCGCATA
ACTTACCAAGAAGGGAAAGGATTAAAACAAGTTTGCGTTTTTTTCCCGCC
AGATTATGTGGATTCGCTGATCTTTTTATGTGACCCCGATGTCAGAAGAG
AAGTAGACACCCCAAAAACGAACACCTTTGTTTTTCCATCAACACAACAA
AGTAAAAATCACGTTGAAGGCTGGCACGCCCTTACCAACTCCTGTAAGAA
AGGTGGTATCACGTCCAAAATAAACGGTACGATGAATAGGCACAGGGTAT
CGTAACTAATTGGAGCATTCAACCTGTCAGAAACTGACCGCAATCTTGCG
TATGACCATTTTGGTCATAGCGAAGAAATGAATAAGTTTGTCTATCAAAT
TCCTCAGGCGGAGCAGCAGCTTCAAAGAACAGGAGAGTTTTTAACGATGA
TCGACAATAACCTAACCCCACCAGATGATATTCCCTCATCTTCAAGCACC
ATCACCAAGCCTACTGCCGTAACCAGTAGATCATTGGAAAATGTCCAACC
ATGCCAAGCTGACCAAGATAAAGACCACTTAAGTGATGAACATCGACGAT
GTTTCAGATTTAGCCAAAACAGATCCTTTGATCCTTGTCGTGGGGGCTAG
AATTTACAATGGTAACAAGTCCAAAAGCGAAAAACTTAATGAAGTGGAGA
AACGGGTGCGATCGACGATGAGGCTTTTAAGCCGGATCTTGCTAAAGTTC
AGACAATCTTATGGGGAGAAAAAAGACCTTTCCGTCGTCTTTCATATGAC
TAATTTAAAACACTTACGATTTGCCATCGAGGAGTTAACAGAAAGTGAGG
AAGCTATAAAGTCTGGATTAAAGGTGCAGATCCAGAATGTCATCAAACAG
TCTGCTAAAGTTTTAGAGGCGCACTTTCTCATCGAGGGAAAATCACAAGA
GGCTACTGATGTATGCGATTTCGTGAAAGTCTTTCACCTTGTGGAGGACG
AAATTTTCAACGGGGCTCTTTATGCTATCAAACAGAAAAGAAATAAAACA
ACGAGAAAACCAGCAAATCTTCCAGATGAAGACCTTGTTCAGGAATTGAA
GGCGTACATATTGAAAGTCACGCTCAAGTCCAACTTCATATTTCAATCAC
CCAAAGACGTATTTGTTGATGTCAGAGATGCCGCATGTGCCCGCCTTACA
ATGTTTAACGGTCGCCGTGGTGGTGAGCCCGCACGTCTTTACGTCTACCA
ATGGACTGAAGCCCTAAAAGGTGATTGGATACGTCCAAAACTTAGAGAAG
ACTACATTGCTTCAGTGAAAACAAAAAATCGCATAACTTACCAAGAAGGG
AAAGGATTAAAACAAGTTTGCGTTTTTTTCCCGCCAGATTATGTGGATTC
GCTGATCTTTTTATGTGACCCCGATGTCAGAAGAGAAGTAGACACCCCAA
AAACGAACACCTTTGTTTTTCCATCAACACAACAAAGTAAAAATCACGTT
GAAGGCTGGCACGCCCTTACCAACTCCTGTAAGAAAGGTGGTATCACGTC
CAAAATAAACGGTACGATGAATAGGCACAGGGTATCGTAACTAATTGGAG
CATTCAACCTGTCAGAAACTGACCGCAATCTTGCGTATGACCATTTTGGT
CATAGCGAAGAAATGAATAAGTTTGTCTATCAAATTCCTCAGGCGGAGCA
GCAGCTTCAAAGAACAGGAGAGTTTTTAACGATGATCGACAATAACCTAA
CCCCACCAGATGATATTCCCTCATCTTCAAGCACCATCACCAAGCCTACT
GCCGTAACCAGTAGATCATTGGAAAATGTCCAACCATGCCAAGCTGACCA
AGATAAAGACCACTTAAGTGGTAAAGGAAGAAAATCCAAAAGGAGAAGGG
CAGCACCAGTATCCGATTCCGACAGTGATACAGACCCAATTCAAGGTAAA
GGAAGAAAATCCAAAAGGAGAAGGGCAGCACCAGTATCCGATTCCGACAG
TGATACAGACCCAATTCAAGTCAAAAGATCATTCAAGTGGAGTGCGGCTT
TGTCAAAAGAATTTGAAAAATCATTTATTGGTTATGTAAATCGCACTGAA
AAAAAATCTACTCCAATCAAAAGATCATTCAAGTGGAGTGCGGCTTTGTC
AAAAGAATTTGAAAAATCATTTATTGGTTATGTAAATCGCACTGAAAAAA
AATCTACTCCAAGTGAACAAGCAATGAAAGATTTTATGAAGACCAACGGG
GTGGATGAATCTTTGTAGGGAAAAATCAAAATCTAGATTAACAACGAGCG
GACCAAAATCGCAAAACGCGTAGAGGAGCGAAAGGCTGGAATGGAGTGCT
AGGTGAACAAGCAATGAAAGATTTTATGAAGACCAACGGGGTGGATGAAT
CTTTGTAGGGAAAAATCAAAATCTAGATTAACAACGAGCGGACCAAAATC
GCAAAACGCGTAGAGGAGCGAAAGGCTGGAATGGAGTGCTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000462_pilon | genome | sc0000462_pilon:43907..50550 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1459-1596:139 |
| Aaloc | 1363-1455:3711 |
| Aaloc | 1288-1359:5174 |
| Aaloc | 1-1284:6645 |
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