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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000373_pilon:176110..178752- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_032057 ID=XLOC_032057|Name=XLOC_032057|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2643bp|location=Sequence derived from alignment at sc0000373_pilon:176110..178752- (Clytia hemisphaerica_ch_hm2_pilon)
TTCGTCAACTGTCTATCGATAAGAATGATTGGGTTCAAAATTTTGTGTGG
TGTACTCCTTTCAAGTTTACTTCTAGAGAATGGAAGCTCTTTGGCTATCT
TAGACGACCTGGATCAAGTCACCATGGTTACTAACGACAACGGCAAAGAA
TACGTTCGAGTTTGCTACTACACAAACTGGGCCCAATATCGAAGCGGATT
GGGAAAATTCACACCTGCGAATATTGATCCTTTTCTTTGTACACACATCG
CGTACTCGTTCGCGAAGATCGTCAACAATCGATTACAATATTATGAATGG
AATGATGTTGAGTATGCTAACATGGTTGGCCAAGTTATGGCTCTCAAAAA
TCAAAATCCAAAGCTGAAAGTTTTGCTAGCAGTTGGTGGTTGGACTCATG
AGACGAACACTAGCCCCTTTTCAGTTATGGTCTCAACAGCTTCCAATCGA
CAAACCTTCATTCAACATTCAATACAGCTTCTTCGCCAGCATGGTTTTGA
TGGTTTGGATTTAGATTGGGAATATCCTGGTGTTCGCCCTAACGAAAACA
AACCTGGAGATAAACAAAGATTCACAGTTCTATGCAAAGAACTAATGGAT
TCATACAAAAAAGAAGCAATTGATACTGGCTCTGACCGTTTACTCTTAAC
AGCAGCAGTAGCCGCAGGCGAAGCCACCATCAGGAAAGCGTACGAAACAG
ACAAATTAGGTTCTCACTTAGATATGTTACATTTGATGTCGTACGATTTA
GCAGGAGCCTGGGAACCAGTCACAGGCCATCACACATCGATGGATGCTAG
TTTGACAAATTCTGTCCCTAATGCATTAGATGTTTGGATCAATGGAGGTT
TCCCTGCCAATAAGGTACTACTTATGTGTTATATTCATGCATTTGAAGTT
TTAATCGTTTGCTCAAATAAAAGTCTTAATCAAAGTCAATCTGTGCTCAG
ATTTTTCTTATCCTTCTTGGATAAAGGATTACAGCCCTTTGAACGGCCAA
AGAGTTATTGTATATGTATTCCCTTCTTCTTCTTTCTTTGTAGATTGCTT
TAGGTTTGGGAACATACGGTCGATCCTTCACATTAACTTCCACAGCAAAC
AATGGTTTGGGAGCAGACGCTATTGGTGGAGGAGCTACGGGACAATACAC
TGGTGAATCTGGATATATCGCTTATTATGAGATTTGCCAAAAGATCAAGC
AGGGTACGTATTAAAAAAAACAAAAAAGCGTTTTGCTTTATATCTGGATT
TTCAATTTTTGAATCACCATCAAATTCATAAATTTTTCACAGTTAGACTT
TAGCTTGAATATTACTCTTTTGTGCCCCCCCCCCCATTTTATGAAATTTT
CCTTTTTAGAGTTTTTTTGGGGAAATCAACCCAACCAAAATCACTTGATA
TTGACCGGCCCCCCATTTTACGAATTTTCTCCCAGTCTACCAACCCCCTG
CTTATTCCACCCTCCACCAATTAAGCACAAAAGAGTAGGGTTGAAAGTGT
AATTATTTAATCCAGTAACGATTTTCTTATAGTAAAGTTTCCTCGAACTC
GTATAAATAGTTTTACTTTCAGGGAAAATGATACCATACAAGGATAACAG
AAATATATATATTTCCATGTGGTATTCGTAGGAAGGAGATAAAAAGCAAG
AAAAAGCGTTTTATTTGTCTATTCGTTTTATTGCATCGAAATGAAATTAT
GATTACATTTTTGATATTTTTTTTCTTCTTTTTTTTGCCAGGGATGACAG
TCGTTGAAACAAGCAGTGCAGGTGCAACGTACGGTTACCTTGGTAACTAC
TGGGTAGGGTATGATAGTGAGGCCAGCATCGTCCATAAAGTTCGATCACT
GATTAAAGGGCGTGGCTTAAAAGGAGCCATGTTCTGGGCCATCGACCTCG
ATGATTTCACGGGTAGCTTCTGCAATAACGGTAAATATCCACTCATGAAT
GCCGTGAAAAATGAACTAGCTTCCGGACAGCCCGTTACTACACAACCACC
GTCAGAAACAACTGTGAAACCCTCACCAACAGAAACAACGATGACTTCCG
AAGAGGCTACTACGGAAGCACCCGTAACCGCTCCACCAATCACAACTTTT
GCGCCACAAACAACAGAACTGGAAACAACTGAACAGGAAACGACTGAAAC
ACCTTCTGGTGAATGCTACCCCACACCGAACTATGCTTCACAGCCAGGTA
TGAAACAATGGTGTACCACTAATTGCAAACCTGGTGAATTTTTTTATTGT
CCTGCTTCTCATTGTATATGCGATAGAACTACACCTCAACCACCCGCTAC
CACTCAGGTATCACCCACCACCCAACCACTAGCCACCACCCAACCACCAG
CTACCACTCAACTACCAGCCACCACCCAACCACAAGAAACAGAATCCCCA
GGAACCGCTTGTCACAGTATCCCTCCTTATGACAAACAACCCGGAATGGA
TCAATGGTGTGAACAAAATTGTAAACTTGGTTATTGTCCAATATCTCATT
GTAAATGTGGTGGTGGAACGGAGTCACCATACGCCAGTTGCCATGGTGTC
CCACCATATCACACACAAGCCGGTATTGATGGTTGGTGTCGACAAAATTG
TGCTTCAGATTACTGTCCTTCAAGCCATTGTAAATGTGATTGA Coding sequence (CDS) from alignment at sc0000373_pilon:176110..178752- >XLOC_032057 ID=XLOC_032057|Name=XLOC_032057|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3852bp|location=Sequence derived from alignment at sc0000373_pilon:176110..178752- (Clytia hemisphaerica_ch_hm2_pilon)
TTCGTCAACTGTCTATCGATAAGAATGATTGGGTTCAAAATTTTGTGTGG
TGTACTCCTTTCAAGTTTACTTCTAGAGAATGGAAGCTCTTTGGCTATCT
TAGACGACCTGGATCAAGTCACCATGGTTACTAACGACAACGGCAAAGAA
TACGTTCGAGTTTGCTACTACACAAACTGGGCCCAATATCGAAGCGGATT
GGGAAAATTCACACCTGCGAATATTGATCCTTTTCTTTGTACACACATCG
CGTACTCGTTCGCGAAGATCGTCAACAATCGATTACAATATTATGAATGG
AATGATGTTGAGTATGCTAACATGGTTGGCCAAGTTATGGCTCTCAAAAA
TCAAAATCCAAAGCTGAAAGTTTTGCTAGCAGTTGGTGGTTGGACTCATG
AGACGAACACTAGCCCCTTTTCAGTTATGGTCTCAACAGCTTCCAATCGA
CAAACCTTCATTCAACATTCAATACAGCTTCTTCGCCAGCATGGTTTTGA
TGGTTTGGATTTAGATTGGGAATATCCTGGTGTTCGCCCTAACGAAAACA
AACCTGGAGATAAACAAAGATTCACAGTTCTATGCAAAGAACTAATGGAT
TCATACAAAAAAGAAGCAATTGATACTGGCTCTGACCGTTTACTCTTAAC
AGCAGCAGTAGCCGCAGGCGAAGCCACCATCAGGAAAGCGTACGAAACAG
ACAAATTAGGTTCTCACTTAGATATGTTACATTTGATGTCGTACGATTTA
GCAGGAGCCTGGGAACCAGTCACAGGCCATCACACATCGATGGATGCTAG
TTTGACAAATTCTGTCCCTAATGCATTAGATGTTTGGATCAATGGAGGTT
TCCCTGCCAATAAGTTCGTCAACTGTCTATCGATAAGAATGATTGGGTTC
AAAATTTTGTGTGGTGTACTCCTTTCAAGTTTACTTCTAGAGAATGGAAG
CTCTTTGGCTATCTTAGACGACCTGGATCAAGTCACCATGGTTACTAACG
ACAACGGCAAAGAATACGTTCGAGTTTGCTACTACACAAACTGGGCCCAA
TATCGAAGCGGATTGGGAAAATTCACACCTGCGAATATTGATCCTTTTCT
TTGTACACACATCGCGTACTCGTTCGCGAAGATCGTCAACAATCGATTAC
AATATTATGAATGGAATGATGTTGAGTATGCTAACATGGTTGGCCAAGTT
ATGGCTCTCAAAAATCAAAATCCAAAGCTGAAAGTTTTGCTAGCAGTTGG
TGGTTGGACTCATGAGACGAACACTAGCCCCTTTTCAGTTATGGTCTCAA
CAGCTTCCAATCGACAAACCTTCATTCAACATTCAATACAGCTTCTTCGC
CAGCATGGTTTTGATGGTTTGGATTTAGATTGGGAATATCCTGGTGTTCG
CCCTAACGAAAACAAACCTGGAGATAAACAAAGATTCACAGTTCTATGCA
AAGAACTAATGGATTCATACAAAAAAGAAGCAATTGATACTGGCTCTGAC
CGTTTACTCTTAACAGCAGCAGTAGCCGCAGGCGAAGCCACCATCAGGAA
AGCGTACGAAACAGACAAATTAGGTTCTCACTTAGATATGTTACATTTGA
TGTCGTACGATTTAGCAGGAGCCTGGGAACCAGTCACAGGCCATCACACA
TCGATGGATGCTAGTTTGACAAATTCTGTCCCTAATGCATTAGATGTTTG
GATCAATGGAGGTTTCCCTGCCAATAAGATTGCTTTAGGTTTGGGAACAT
ACGGTCGATCCTTCACATTAACTTCCACAGCAAACAATGGTTTGGGAGCA
GACGCTATTGGTGGAGGAGCTACGGGACAATACACTGGTGAATCTGGATA
TATCGCTTATTATGAGATTTGCCAAAAGATCAAGCAGGATTGCTTTAGGT
TTGGGAACATACGGTCGATCCTTCACATTAACTTCCACAGCAAACAATGG
TTTGGGAGCAGACGCTATTGGTGGAGGAGCTACGGGACAATACACTGGTG
AATCTGGATATATCGCTTATTATGAGATTTGCCAAAAGATCAAGCAGGGG
ATGACAGTCGTTGAAACAAGCAGTGCAGGTGCAACGTACGGTTACCTTGG
TAACTACTGGGTAGGGTATGATAGTGAGGCCAGCATCGTCCATAAAGTTC
GATCACTGATTAAAGGGCGTGGCTTAAAAGGAGCCATGTTCTGGGCCATC
GACCTCGATGATTTCACGGGTAGCTTCTGCAATAACGGTAAATATCCACT
CATGAATGCCGTGAAAAATGAACTAGCTTCCGGACAGCCCGTTACTACAC
AACCACCGTCAGAAACAACTGTGAAACCCTCACCAACAGAAACAACGATG
ACTTCCGAAGAGGCTACTACGGAAGCACCCGTAACCGCTCCACCAATCAC
AACTTTTGCGCCACAAACAACAGAACTGGAAACAACTGAACAGGAAACGA
CTGAAACACCTTCTGGTGAATGCTACCCCACACCGAACTATGCTTCACAG
CCAGGTATGAAACAATGGTGTACCACTAATTGCAAACCTGGTGAATTTTT
TTATTGTCCTGCTTCTCATTGTATATGCGATAGAACTACACCTCAACCAC
CCGCTACCACTCAGGTATCACCCACCACCCAACCACTAGCCACCACCCAA
CCACCAGCTACCACTCAACTACCAGCCACCACCCAACCACAAGAAACAGA
ATCCCCAGGAACCGCTTGTCACAGTATCCCTCCTTATGACAAACAACCCG
GAATGGATCAATGGTGTGAACAAAATTGTAAACTTGGTTATTGTCCAATA
TCTCATTGTAAATGTGGTGGTGGAACGGAGTCACCATACGCCAGTTGCCA
TGGTGTCCCACCATATCACACACAAGCCGGTATTGATGGTTGGTGTCGAC
AAAATTGTGCTTCAGATTACTGTCCTTCAAGCCATTGTAAATGTGATTGA
GGATGACAGTCGTTGAAACAAGCAGTGCAGGTGCAACGTACGGTTACCTT
GGTAACTACTGGGTAGGGTATGATAGTGAGGCCAGCATCGTCCATAAAGT
TCGATCACTGATTAAAGGGCGTGGCTTAAAAGGAGCCATGTTCTGGGCCA
TCGACCTCGATGATTTCACGGGTAGCTTCTGCAATAACGGTAAATATCCA
CTCATGAATGCCGTGAAAAATGAACTAGCTTCCGGACAGCCCGTTACTAC
ACAACCACCGTCAGAAACAACTGTGAAACCCTCACCAACAGAAACAACGA
TGACTTCCGAAGAGGCTACTACGGAAGCACCCGTAACCGCTCCACCAATC
ACAACTTTTGCGCCACAAACAACAGAACTGGAAACAACTGAACAGGAAAC
GACTGAAACACCTTCTGGTGAATGCTACCCCACACCGAACTATGCTTCAC
AGCCAGGTATGAAACAATGGTGTACCACTAATTGCAAACCTGGTGAATTT
TTTTATTGTCCTGCTTCTCATTGTATATGCGATAGAACTACACCTCAACC
ACCCGCTACCACTCAGGTATCACCCACCACCCAACCACTAGCCACCACCC
AACCACCAGCTACCACTCAACTACCAGCCACCACCCAACCACAAGAAACA
GAATCCCCAGGAACCGCTTGTCACAGTATCCCTCCTTATGACAAACAACC
CGGAATGGATCAATGGTGTGAACAAAATTGTAAACTTGGTTATTGTCCAA
TATCTCATTGTAAATGTGGTGGTGGAACGGAGTCACCATACGCCAGTTGC
CATGGTGTCCCACCATATCACACACAAGCCGGTATTGATGGTTGGTGTCG
ACAAAATTGTGCTTCAGATTACTGTCCTTCAAGCCATTGTAAATGTGATT
GA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000373_pilon | genome | sc0000373_pilon:176110..178752 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1393-1911:520 |
| Aaloc | 1027-1392:901 |
| Aaloc | 865-1023:1601 |
| Aaloc | 1-864:2644 |
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