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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000454_pilon:62468..71082+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036601 ID=XLOC_036601|Name=XLOC_036601|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8615bp|location=Sequence derived from alignment at sc0000454_pilon:62468..71082+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATGGACTTGGTAAAGGTAAGGCATACTTTCATCCTAccgttttatt
attttattaccgttttttatttaCCTACCTTCACTTCACCCCTTACCTTC
CTtctaaaaagttataaaaaggaCGATTTGATTTTTAGAGCAGAGTTTCT
CTTCtcgtttatttttcatttcacaaGTCTCGTCAtatttgcggaacgac
cgttttgagggcgcgaagcgcccgaatagggagtgtagcatcctttctct
agatctgggcgtgtggcgtaaaaaatttgtatatgttatatgtacgaaaa
tttcaaaaaaaatcgtagggtgacatatcgactttgcttcgtgttggatg
ggatcaattttctgtagcactattaaaagtatctgttttgtaaaaatatt
tattgcaatagaatatgattgatatcaaaagtattataaagtaagacttt
tgattaaaattgcaacttttgtacaatTAACAGTAAGAGTGTCAAAGCTT
tatcttctttgcttttttcccgcttcttccacagtcgagtactattgcaa
attaggagaaatgcgggtatttcgcttaaataggatgaattatcctaaat
aagataaaatcgatagcttagttaggagaaatggaagaaaaagttgattt
tctgaacaaattcaGAGATCCGCGTCTTTATTACTCTCTAAATCAATTGT
GCTCATACAGAAGATCATTTTAAACCAAAAGTTAGCTTCTTATCAGCGcg
gagtgaaaaaatataagcaTTTATCCTATTTTGGATAAAATGTACTAAAT
AAGAGAAACAGTATTTTTGTTTACTCTCTTTCCCGtaataaaaaagatga
aaaattaaaaaggtttgAGTGGACGAAAAGTGTCGACAGCGTTCAATCGT
GTCTGTTACAATTACTGTTTAATACATCTTAATTTCTATATCTTCAAAAC
ACGAGTcaagtttttactaaaagaattAGATGTTTAACATCTGAAGTTGT
TTCAAGAAGCCGATTTGGAAGATATTGTTCAGCACAACCGATTCAGGTTC
GACAATAATCTCCGTAAAAAGCCCTTCTTAGGGTTTTATTCTACAGTCAA
TGGGTATCATCACTTTCACGTGAGACCCTACTCATGCAGGATGACTTGTA
TGAGAGAACCAGAAAACAATTATGACCCAAAGGTGATCAAAATCCTGAAA
GAAGATGGTACATGTGTTGGAAGGATGCCAGTTTATGCCGAGTCAGCAGA
ATTTCGGAATCAATTTCGCTTAGCTCAGCGGAATtccaagtatttttctg
aacTACGCATGCGTACTACTTAAAAGTTGAATAACTTCTGAACGCACGCT
GACTGGTGGATCAGACTTCACAAGCATACTATGCTGGctccaaatttctt
aaatttatgcaaaacttgacgcggatctctgaatttgttcagaaaatcaa
ctttttcttctatttctcctaactaagctatcgattttatcttatttagg
ataattcatcctatttaagcgaaataaccacatttctcctaatttgcaat
agtactcGACTGTTCCAGACTGTTCCAGATGTCtgggcccagtctttttt
tctgcgtttcattttcaaaacaacaaagatggccctgaaaaccaacgaat
tttttcggtttttgaggtgcatgcattaacttttggactgattatggccc
attgaaaggtaaatcttcattctttttcacctttatagtttcaactacct
ttggaatgttacattagtactttttctttgtgttgacttttttgtttata
aattggatttcatctcacaaaacaaaatgtatttttctcggccatgtgtt
tcatggatatcacatggccatgttttctttccacaggcttatttttattc
atatgggGCGTGTGGCTATTtcattttactctaactataattattttcat
ctcttctgtcttcaggGTTCAGGTGAAGGGGAGCTTGCCTTGATTGATGT
GATGGGTGACTTTTACCGATCGGCCgactggctgaatcagcagtgtttca
gagttttggtgggtgaacgtacacaacaaagaagcagcataaaaccaaaa
tatacatagcattatgactgtatgaacagattgtgattgatggagaataa
taaaatggtcctgctgaatataaattgtgccagttccatgttattccgtg
caatgtttacgagacaaaagagaagactgtactggaaaacagaatcaaaa
tgataattactagttgctattttcgtcattgaagatttcttcaatattta
ttcgataataatggaatcattttgatttggcttgattgattgttgattcc
aaTCGCTTTCTTGCTGActctcgagagatttttgtttaacattggagctt
gatcatcatcaattagaataatgccgatttatatttgtacgataaagtga
taacaaaagcatgattgatgactttagcccgaaagacaacttaaatgata
aaagtacctatggtatatgttacttttgatgctagctcgaatatattttc
aaacaagatatctttcacaaaaaagtgttttttactggCAAATcaactta
aatattttcataaactctttgacgTGAGATTGTAGATAACGCTTGTTATT
ATATTACCGCCTcctaataaatagtaatggcattactttatgtacttata
tgaattatagaagtttttgaatttattctgcaaggcaaggttctagaaaa
aaaattagtttggactggtttggattgattttataaatgaaacattggga
aacatctttttgccgaacacacaatatcgcaaaaatagactcacaaaaag
accaaatttcatcacgcaaaaaatctcactattcttgataagttactgga
aattattgctAGGATGCTGGTTCCTTTTCggaaaattgatactacatttg
aagtgaatgatatcataaagaggtagcacatttagagagattgtatacta
ggttctaatggctgaaaagctcaagatcatctttcaaactacgcactatt
ctcttttaaattttgaagggaaatgtataatataatttttgaattgttga
taaatttgtctttgtaaaagttttatagagagctaagtaattgtttcaaa
aactcactaaaagatgggataaaagtctttcaatttattctgataaacta
ccagcctaaagcctaatgtaatatctttgttgttggtcattcagccattg
cacaagaaacatgtgtgttcttttttgtcacttgcactattttttataag
aaccagtaaatttttttaaaggtttggctgtccttttttgcactttgagc
ctgaaattgtttttgaattgctcaaaacccggcgtatttaatttttgagc
ctcgtattgttcttataaaattcttataaaaaaaaaagagttgagtggga
aaacattatcaataaaagtttgacttataaaaataatttgttagtgtcga
aatttcttcgctttgcgaaaacggaaggtcgttccgcaaccccttttatg
ttgattctATTCGCTCCTAAAAATTGCTAAGACTTAAGTCACTCCATGCA
TCAGCATCAGCATaaaacaaaagttccataaaaaaggaaaaaaggcataa
cacacgtttttttataagaacattcaaaatttttaatgccttcgaatgtt
cttaactttttgagttttaaacctaataATATTAACATgttttattttga
ccattttgtgagtacttttgaccatttttcctaagaaatagggtgttttt
tttGATTGGGGAGCCCACaaatcttaaaatgttcttgacttgttcttaac
atcatagccatcgaagccctattttcttatatagtttgttcttataaaaa
acgtgtacagtagGGTTTGAAATCAATAACGGTCGTCTAGCGGACCTAAA
TTAATGCTTATTGCCTGTTgtcccaaaaattaaaaatcagtaTCCAATCA
ATCAAAATTAACCCTGATCGGACACAATTTGTCCGACCAACCCGATGTCC
TCGATTGAAATCGTAATTAAAGCCatttttcgttcgaatttctttCCATA
GAAAAGCCGTTCGTACCGATATTTGGTTGTCGTAAAAGACAGCAGCGCCA
CGCAGCCTACGCGAATCCAGATGAACTGTCTACTCTTCCatcttcaaatt
caaacatATCAAGCAATCATAACGTCTCTCAAATATCAATTGCCTCTGac
tttgattgttttgatgTCCCGATGATGGCTGATGAGAAGCCACCAGTcac
aaagaagaaaatcatGCTTGAGCAAAAACCACCACAATATCGacaaaatc
aagaacaacaaagaaacactttccaacaacagaaaaaaccaaaacTTATG
AAATCATTTTCCGAAAAACATGCGTCGTCTAATAACAGCAAAACAATGGA
GAAAACTGATTACACTCCGTCCTTTCAGAAACAACAACCTAGCTATCAAA
ACCATTCTACCAGGAAATTTTCCGATCATGGCGAacgaaaacattatttt
tctcGACAACAACAAGGAAAGAGTCTTTTAACAACGATGCAAGACCAAGG
ACCTTCTAGGAAGCCTTTCGATGATAAAACTTTTTCATACCAATCGGGAA
ACACGCAAAGGTGATTCTTCCACTGATTCTTCATTTAAACAaggaaaaat
caatcaaagtcaTATTAAGAagggtgaaatatttttgaatggtTCGAAtt
gaaaagtcaaataaaataaaacttgacCGAATTTTCAGTCGGACTGGTCA
CACCTTTTCGAACAATCAATTTATCTAAAACTTTGCTgcattatttcaac
tttttttcataGATCCGGAGATTTCGGGAATAATGAATTATATCAAGGCT
CAAAACCCTCGTCTTCGAAATATGTTGAAacgaaaaaggtaaaaaaaaat
cgaaactgACGATACTTAGTACTTCAATCGGAGTTTAATTTTCGCAATAT
ATTTAATTTCGTGAACGAGctgaaatcatcaaaaatattttcctattTTA
AGCAGGACGACTCGATGATGGATATTTCAACAATAAACCGATCTATCATG
GTAAAGAATAAGACACAACCGCTGGCACCACGTTTTATAAGCTCTCGTGT
TGGTGATATaaaaaaaTGGTTAGATTTGCCAATCAATGAAGAAACGTCAC
AAATTGTCTTCGAGCTCGTTGGTAAGGTTAATGataattttaacttttat
tcGCTTACAATTTTGTTCATCAGTTTGATTGATCTCTTTTTGTATTTCTA
GTTGTGCATGTCACTTAGGGGatattttgactaaaattttCGTGACTGGA
CCCTTCTTTATTACCTTAGGAATCCTAGATTCAACCATTTCGTATCATCT
ACCTGGAGTTGAAAAGAAATTCACATTAAAAGATTCCTCAGGAACCATTA
GGTAGGTAAGGTTTTTTATCCAAAACTTGCTTGATTACACCCGTGTCTCA
GTGAGTGATTGTTATTCAGACAGGTAAAATTCAGTAGAATAGccattttt
ttaaccaatcttAATATTACTCTTGGGTATACTTATTTTTCTAAACAATT
TCATTGCCCCCGCAAGGAGCGCAGCGACTGAggaggcattcatagcttca
cgcaatatattggactggaatctcgattttttgttttgtttcttgtcttt
caaactgaatactaaatactgtaatttagtcagaaattcatttcagcaat
gatttcaattctttttctggaatctttaaaaaagtttgctcaagttttca
aatgtacatttgatatttttgttcaaactgtaatttatatctttgtctgt
tattatattaataactagctttattgcttatagagcttcttgagctttaa
agaccatcatatggtcgtaactcgagaaagtccttcttaacttggtaaaa
caagataccggcaaagtacaaaaaagttgaatgtacacataagtaaagtt
gaatccaaaagtggttgaatgtgttgaatgtaaacaaacttttttcaggt
ttttaaaatagatttacctcacttagagtgttttcactgtttgttcagtg
tggtattaaatctattttaaaaacctgaaaaaagtttgtttacattcgtt
taactttgcatGCGCGCGTTctactttttcatgcagttgtgataggggcc
gtccatatagtacgtacgcagagattttccaaaaatttgataccccctcc
ccccttgtacacagagaacaatagaaatgatgtcatttatacaatagatg
tacgcttttgctaaacccccctctcccccttcactgcgtacgtaccatat
ggatggccccatagcctaaataacttacgctttaagggtttggtgaaata
gctccaattctagctttccaagttaaggcatttaacggtggttagcatat
agctaaaaactcaaaaattctagtttcctgaaggcccgtctcttcactgc
tcttcattgtctgcgctgcaatcatatcttaatggcttcaatcctttcag
cttggagaaaagattgcatcatgaaaaaagtctatgcacttgaaaaaaat
taggcacatttcaacttttcgactgtacctctgaatggaccacatagtag
ggggaattttgttcgattttttggaatcgcttgactgttttgttagaagc
acttgttatacatttttggaaagctaaggggtaggggaatcgaaattact
atgtttccaatttttttcggacactttggtgtgattttcggacaaatatg
acggtctcaggcaaaaatcatagggttaaaaattaatgaaaattttagct
cgagaaaacggagacctgttgtatatatttggaaagctctcaaaaaatta
agattagagatatattgcaagtataggtgatttctgtacctaacgcgaga
tattaacccttgaaaaccgtgtttttcagccagaaacagctattttgtcc
agtttttgcgctttcggaagctcaatatctcgagttaggtactgaaatca
cctatacttgcaatatatctctaatcttaattttttgagagctttccaaa
aatatacaacaggtctccgttttctcgagctaaaattttcattaattttt
aaccctatgatttttgcctgagaccgtcatatttgtccgaaaatcacacc
aaagtgtccgaaaaaaaattggaaacatagtaatttcgattcccctaccc
gttagctttccaaaaatgtataacaagtgcttctaacaaaacagtcgagc
gattttacaaaatgccctctactaacaatgacattcctttatttttcttt
tgactgcaatcacagcgtacgcaagtggagcccgggccttaactaggatt
ggtctatttcagatggcgcagaactttttgataaattttatacgcagtat
cattttatcatcttactattgtttattagacaaagtagcaatagagaatt
gttgaaatatatagcagccaatgaaaaataaacaagctatttctgattac
tttgttgatttattcaccgctatatattttgcctacaatctaagatgtct
gcagcattatcggaaaaaggtctatttagtgaatgatcgtgacatatatt
gttgtaagaaaaaacaaacaaacaaggagatgtgaaagtcagtaagataa
tgataccatgattttcgaaatatgtttttgagaagcttttccagatttat
aaattgtcaagctgcatgaattcttcaagtattttgttaatggaatatga
tttttttttcccttgaattttattaaattgtcaagctgtatgaattcttc
aagtattttgttaatggaatatgattttttttcaatcaatcaataaataa
ttaaatcaatcaattattcctgattattttttatgatttaatttttaaag
cattaaaagctttataagtgcatgagatgacctttctgtgggggcattta
gtaaaagctatgactagttattATTCAGAGCAACGAACGGAAGACGAAAA
ATGATTTTAACATAACTGAGTGTAAATTTTCACCTTATTATATTTTCAGG
TGCGTGTTTTGGGAGATGGTAAGCATTTACATTCATTCACCATCGTTATG
TCATCATAAGAAATCTTCAAGAGCAACATGAACTCCATAAAAAGCTTTTT
AGCTTCAAATCAGGAGTAATAAGATATTATTTTCTCATATAGGACCGTAA
AATTCCACAACTTCGACGTGGTAGTTTGATTCGGTAAGTTTGGCAATata
tatatcatattttcaGTCGAAAACGAACTgctacatccctgtctcagtga
cttgGAGATCAGTGAGATAAAACGAACTCTAATAGTGGAAGTAAGCTAAG
GATTAGTACAGTAAACATTTGTTAAAGAAGAGGTTTACTTAAGAAATCAA
ATGTTCTTCTATTCTAGATGTGTTGGCAGAATGAGAGATAGCTCCATCTT
TCACTGCGTCTCTGTTAGATCGATCGCACCAAGTGAGCAATCAATACTTC
AAAAGTTTCAACAGAATTGTCAACAGTACCTTCAACATAAAATGACTACG
TTTAATGAAGTCTGA Coding sequence (CDS) from alignment at sc0000454_pilon:62468..71082+ >XLOC_036601 ID=XLOC_036601|Name=XLOC_036601|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2220bp|location=Sequence derived from alignment at sc0000454_pilon:62468..71082+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATGGACTTGGTAAAGATGTATGGACTTGGTAAAGAAAAGCCGTTCG
TACCGATATTTGGTTGTCGTAAAAGACAGCAGCGCCACGCAGCCTACGCG
AATCCAGATGAACTGTCTACTCTTCCatcttcaaattcaaacatATCAAG
CAATCATAACGTCTCTCAAATATCAATTGCCTCTGactttgattgttttg
atgTCCCGATGATGGCTGATGAGAAGCCACCAGTcacaaagaagaaaatc
atGCTTGAGCAAAAACCACCACAATATCGacaaaatcaagaacaacaaag
aaacactttccaacaacagaaaaaaccaaaacTTATGAAATCATTTTCCG
AAAAACATGCGTCGTCTAATAACAGCAAAACAATGGAGAAAACTGATTAC
ACTCCGTCCTTTCAGAAACAACAACCTAGCTATCAAAACCATTCTACCAG
GAAATTTTCCGATCATGGCGAacgaaaacattatttttctcGACAACAAC
AAGGAAAGAGTCTTTTAACAACGATGCAAGACCAAGGACCTTCTAGGAAG
CCTTTCGATGATAAAACTTTTTCATACCAATCGGGAAACACGCAAAGAAA
AGCCGTTCGTACCGATATTTGGTTGTCGTAAAAGACAGCAGCGCCACGCA
GCCTACGCGAATCCAGATGAACTGTCTACTCTTCCatcttcaaattcaaa
catATCAAGCAATCATAACGTCTCTCAAATATCAATTGCCTCTGactttg
attgttttgatgTCCCGATGATGGCTGATGAGAAGCCACCAGTcacaaag
aagaaaatcatGCTTGAGCAAAAACCACCACAATATCGacaaaatcaaga
acaacaaagaaacactttccaacaacagaaaaaaccaaaacTTATGAAAT
CATTTTCCGAAAAACATGCGTCGTCTAATAACAGCAAAACAATGGAGAAA
ACTGATTACACTCCGTCCTTTCAGAAACAACAACCTAGCTATCAAAACCA
TTCTACCAGGAAATTTTCCGATCATGGCGAacgaaaacattatttttctc
GACAACAACAAGGAAAGAGTCTTTTAACAACGATGCAAGACCAAGGACCT
TCTAGGAAGCCTTTCGATGATAAAACTTTTTCATACCAATCGGGAAACAC
GCAAAGATCCGGAGATTTCGGGAATAATGAATTATATCAAGGCTCAAAAC
CCTCGTCTTCGAAATATGTTGAAacgaaaaagATCCGGAGATTTCGGGAA
TAATGAATTATATCAAGGCTCAAAACCCTCGTCTTCGAAATATGTTGAAa
cgaaaaagGACGACTCGATGATGGATATTTCAACAATAAACCGATCTATC
ATGGTAAAGAATAAGACACAACCGCTGGCACCACGTTTTATAAGCTCTCG
TGTTGGTGATATaaaaaaaTGGTTAGATTTGCCAATCAATGAAGAAACGT
CACAAATTGTCTTCGAGCTCGTTGGACGACTCGATGATGGATATTTCAAC
AATAAACCGATCTATCATGGTAAAGAATAAGACACAACCGCTGGCACCAC
GTTTTATAAGCTCTCGTGTTGGTGATATaaaaaaaTGGTTAGATTTGCCA
ATCAATGAAGAAACGTCACAAATTGTCTTCGAGCTCGTTGGAATCCTAGA
TTCAACCATTTCGTATCATCTACCTGGAGTTGAAAAGAAATTCACATTAA
AAGATTCCTCAGGAACCATTAGGAATCCTAGATTCAACCATTTCGTATCA
TCTACCTGGAGTTGAAAAGAAATTCACATTAAAAGATTCCTCAGGAACCA
TTAGGTGCGTGTTTTGGGAGATGGTGCGTGTTTTGGGAGATGGACCGTAA
AATTCCACAACTTCGACGTGGTAGTTTGATTCGGACCGTAAAATTCCACA
ACTTCGACGTGGTAGTTTGATTCGATGTGTTGGCAGAATGAGAGATAGCT
CCATCTTTCACTGCGTCTCTGTTAGATCGATCGCACCAAGTGAGCAATCA
ATACTTCAAAAGTTTCAACAGAATTGTCAACAGTACCTTCAACATAAAAT
GACTACGTTTAATGAAGTCTGAATGTGTTGGCAGAATGAGAGATAGCTCC
ATCTTTCACTGCGTCTCTGTTAGATCGATCGCACCAAGTGAGCAATCAAT
ACTTCAAAAGTTTCAACAGAATTGTCAACAGTACCTTCAACATAAAATGA
CTACGTTTAATGAAGTCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000454_pilon | genome | sc0000454_pilon:62468..71082 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 964-1110:8469 |
| Aaloc | 922-960:8243 |
| Aaloc | 904-921:8101 |
| Aaloc | 823-900:5372 |
| Aaloc | 655-819:5056 |
| Aaloc | 580-654:4864 |
| Aaloc | 22-576:4104 |
| Aaloc | 1-18:1 |
|
