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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000627_pilon:47642..48979- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_020690 ID=XLOC_020690|Name=XLOC_020690|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1338bp|location=Sequence derived from alignment at sc0000627_pilon:47642..48979- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACCAATATTGCAAAATCAATGTTTGTACCTCCAAATATGCTTGGCAA
AGATGAATTATCAATCTCACTTGGCGTAGATTTCTACAGAGATATTTACG
ACCAAGGCTTTGATGGTTCTGGTAAATATTACATTATTGCAATAGATGAG
TATGGAGAATTTGATATGGCTATTTTTGTTATCGATTTTGATGCAGTAAC
TGAATCAATTGGAAAGAAGATATTGAAGATCTCAATACCTATCGAATGTG
AATGCGACAGACAGTCTTTCTTGTTTCCATACCATGGCAAAGTTGTCCAT
AGTGTTCAATATAAAGCATCAGAAGATGAAAATATTGCTGTGGACCTTTA
TTATCTCGATATCTTTGACCTTTTGAAAAAATCGAATGACACAATTGTGA
TTGATAAAACACCTGATATTACTTTGAATTATGACAAGGAACGATTTAAC
AAGATTTATTTTGAACGTTGTAGTGTTGATAAAAAATCATCAACTCTGCT
TCTTCAAGGGTATTGTAGATATAGAGAAGATAGATGGTATTATCGATATC
GACCTGAGATTTGCATCGATGTTTTGCACGTTAGTAAGATGCATATGGTT
CATTTGAAAAGGGTGGAATGCGATTTGGAGATTTTTTCTTCCGGTATTTA
CCATCCAATGAAGATCTTATATTCCAAACAAAGGCTGTATTTTTCTGCAA
AATCTGTTAAAACGTACGAAATCTTTGAAGTTGATCTTAATGGGAAAATT
GTATTTTCATACATACTGTCATGGGATTCTGATTTGTTCAATTATCAGTC
TTTATTGCAATCTGGAGAAGGTGATACAGTGATTGTCATTTTCTACGGTA
TATCAGGAATCTTTTGCATGCAAAGACTTCTAGAGGGTCATATTGGATCC
AGTCAAGAATTCAAACTTCCTGTAAACCTCGAAATCACTAAAGTCGATTT
TCCTGGTTGTCCAATATTAAAATTTGGACATCTTTTGATTCCCTTGCTTT
ACGAGCCGGACAAGTCATCGACGAAATTTTTTCTGTTCGACTTAAATAGC
AAACAGATTTCAAGTGAGATTAATGTAAATCCAAATGATGAAATGCAGAC
ATTTTCATTAAATTGGAATTTAAAGGAATTGGTTTATACTGGGTTCTATG
TAAGCAATCACGAGGAGGGTGGCCATGATGAGATGTTGTTCAAAGCTCAT
AAGATTGTTTTCCCAAATATTGGCTTAACTTTGAAATGTTTAGCGCGTCT
TGCTGTTTTGACCTCGTTCAGTGAGGAAGAAATAATCAAGCAAAATCTTC
CAGAATCTTTATTCCGGTTTCTTGGAATTGAAAAATAA Coding sequence (CDS) from alignment at sc0000627_pilon:47642..48979- >XLOC_020690 ID=XLOC_020690|Name=XLOC_020690|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2676bp|location=Sequence derived from alignment at sc0000627_pilon:47642..48979- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACCAATATTGCAAAATCAATGTTTGTACCTCCAAATATGCTTGGCAA
AGATGAATTATCAATCTCACTTGGCGTAGATTTCTACAGAGATATTTACG
ACCAAGGCTTTGATGGTTCTGGTAAATATTACATTATTGCAATAGATGAG
TATGGAGAATTTGATATGGCTATTTTTGTTATCGATTTTGATGCAGTAAC
TGAATCAATTGGAAAGAAGATATTGAAGATCTCAATACCTATCGAATGTG
AATGCGACAGACAGTCTTTCTTGTTTCCATACCATGGCAAAGTTGTCCAT
AGTGTTCAATATAAAGCATCAGAAGATGAAAATATTGCTGTGGACCTTTA
TTATCTCGATATCTTTGACCTTTTGAAAAAATCGAATGACACAATTGTGA
TTGATAAAACACCTGATATTACTTTGAATTATGACAAGGAACGATTTAAC
AAGATTTATTTTGAACGTTGTAGTGTTGATAAAAAATCATCAACTCTGCT
TCTTCAAGGGTATTGTAGATATAGAGAAGATAGATGGTATTATCGATATC
GACCTGAGATTTGCATCGATGTTTTGCACGTTAGTAAGATGCATATGGTT
CATTTGAAAAGGGTGGAATGCGATTTGGAGATTTTTTCTTCCGGTATTTA
CCATCCAATGAAGATCTTATATTCCAAACAAAGGCTGTATTTTTCTGCAA
AATCTGTTAAAACGTACGAAATCTTTGAAGTTGATCTTAATGGGAAAATT
GTATTTTCATACATACTGTCATGGGATTCTGATTTGTTCAATTATCAGTC
TTTATTGCAATCTGGAGAAGGTGATACAGTGATTGTCATTTTCTACGGTA
TATCAGGAATCTTTTGCATGCAAAGACTTCTAGAGGGTCATATTGGATCC
AGTCAAGAATTCAAACTTCCTGTAAACCTCGAAATCACTAAAGTCGATTT
TCCTGGTTGTCCAATATTAAAATTTGGACATCTTTTGATTCCCTTGCTTT
ACGAGCCGGACAAGTCATCGACGAAATTTTTTCTGTTCGACTTAAATAGC
AAACAGATTTCAAGTGAGATTAATGTAAATCCAAATGATGAAATGCAGAC
ATTTTCATTAAATTGGAATTTAAAGGAATTGGTTTATACTGGGTTCTATG
TAAGCAATCACGAGGAGGGTGGCCATGATGAGATGTTGTTCAAAGCTCAT
AAGATTGTTTTCCCAAATATTGGCTTAACTTTGAAATGTTTAGCGCGTCT
TGCTGTTTTGACCTCGTTCAGTGAGGAAGAAATAATCAAGCAAAATCTTC
CAGAATCTTTATTCCGGTTTCTTGGAATTGAAAAATAAATGACCAATATT
GCAAAATCAATGTTTGTACCTCCAAATATGCTTGGCAAAGATGAATTATC
AATCTCACTTGGCGTAGATTTCTACAGAGATATTTACGACCAAGGCTTTG
ATGGTTCTGGTAAATATTACATTATTGCAATAGATGAGTATGGAGAATTT
GATATGGCTATTTTTGTTATCGATTTTGATGCAGTAACTGAATCAATTGG
AAAGAAGATATTGAAGATCTCAATACCTATCGAATGTGAATGCGACAGAC
AGTCTTTCTTGTTTCCATACCATGGCAAAGTTGTCCATAGTGTTCAATAT
AAAGCATCAGAAGATGAAAATATTGCTGTGGACCTTTATTATCTCGATAT
CTTTGACCTTTTGAAAAAATCGAATGACACAATTGTGATTGATAAAACAC
CTGATATTACTTTGAATTATGACAAGGAACGATTTAACAAGATTTATTTT
GAACGTTGTAGTGTTGATAAAAAATCATCAACTCTGCTTCTTCAAGGGTA
TTGTAGATATAGAGAAGATAGATGGTATTATCGATATCGACCTGAGATTT
GCATCGATGTTTTGCACGTTAGTAAGATGCATATGGTTCATTTGAAAAGG
GTGGAATGCGATTTGGAGATTTTTTCTTCCGGTATTTACCATCCAATGAA
GATCTTATATTCCAAACAAAGGCTGTATTTTTCTGCAAAATCTGTTAAAA
CGTACGAAATCTTTGAAGTTGATCTTAATGGGAAAATTGTATTTTCATAC
ATACTGTCATGGGATTCTGATTTGTTCAATTATCAGTCTTTATTGCAATC
TGGAGAAGGTGATACAGTGATTGTCATTTTCTACGGTATATCAGGAATCT
TTTGCATGCAAAGACTTCTAGAGGGTCATATTGGATCCAGTCAAGAATTC
AAACTTCCTGTAAACCTCGAAATCACTAAAGTCGATTTTCCTGGTTGTCC
AATATTAAAATTTGGACATCTTTTGATTCCCTTGCTTTACGAGCCGGACA
AGTCATCGACGAAATTTTTTCTGTTCGACTTAAATAGCAAACAGATTTCA
AGTGAGATTAATGTAAATCCAAATGATGAAATGCAGACATTTTCATTAAA
TTGGAATTTAAAGGAATTGGTTTATACTGGGTTCTATGTAAGCAATCACG
AGGAGGGTGGCCATGATGAGATGTTGTTCAAAGCTCATAAGATTGTTTTC
CCAAATATTGGCTTAACTTTGAAATGTTTAGCGCGTCTTGCTGTTTTGAC
CTCGTTCAGTGAGGAAGAAATAATCAAGCAAAATCTTCCAGAATCTTTAT
TCCGGTTTCTTGGAATTGAAAAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000627_pilon | genome | sc0000627_pilon:47642..48979 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 397-1341:946 |
| Aaloc | 1-393:1339 |
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