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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000019_pilon:580601..582466- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041976 ID=XLOC_041976|Name=XLOC_041976|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1866bp|location=Sequence derived from alignment at sc0000019_pilon:580601..582466- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGAAACTATTTGTTCTGGCCAGCATTGCAACAGCTGCTCTGTGTAT
GACCATTGAAAAAGCTGAATTAATTGCAGATGAAGGATGGCAATTATGGA
AATCTACACATAATGCAGCTTATGCGGACTTTAATGAAGAAAAAGTTAGA
TATACAATTTGGCAAGACAATGTTAGACGTATTACCCAATTCAATCGTAA
CAACAAAAAGATGTCTTTAGGTATGAATCATTTTGGGGATATGACAACTA
CTGAATTCAAAGCGAAAATGAATGGTTACTTGGCTGGAAGCAAACAACAA
GGATCTACTTTCATGACTCCAAACTTTGCTGAGATTCCAGATTCTGTTGA
TTGGAGAAAAAAGGATGGATATGTTTCTGAAGTCAAAAATCAAGGACAAT
GTGGATCATGCTGGGCTTTCTCTACTGTAAGTTTTCGAATTCATCACTTG
GCTGAACTGTGTTTGTTATTGGGAAAGCTAAGCTCCATTTAATTTAACTA
ATTTGGTTACAGTGGGAGAGTCGTGTTACCCTCATGTTTGCAACAATAAA
ATTATGTTGTTTTTTAACAAACAGCTAGGATTATATTTTGGGAGTTGCAC
TAGTTTTTCCAAAAATTTGTAAAATTTAATGCTTGACAAAATTTTCATAC
CCAAGATTTTTGCCAAAAACTCTTGTCTTCTGTAAAAACCCTAGGAAGTG
GAAAGAAATTAGTTTCGGATGTCCAAAAATAAGCCCCACAAAAGTTTTTA
TCCACTTCAGGTAAAGGGTTGTGTGTACAGTATAATTGTTTTTCATCACA
AAATTAATGTTTGTTGTGTCTGTTTTTATAGACTGGAGCTTTGGAAGGAC
AACATTTCAGAAAGACCGGTCAAAAGGTTGATTTGAGTGAACAAAACTTG
GTTGATTGCTCTAAAGATTATGGAAACTATGGATGTCAAGGTGGATTAAT
GGACAATGCTTTCAAATACATCAAAGCCAATGGGGGGATTGATACTGAGA
AAAGTTACCCATACGAAGGAAAAGTAAGAGCTATTTCTGGTTGCTGCAAT
ATACATACATATAATTCAGTTATCTTTAATTAATGTAATATAAATGATTC
ATGGCTTCTTGAATTGATAAGAAGGCTTTTAAAGTACGAAAATCTCTGAA
ATTATCTTATTTGTTTAACCCGTTTTTCTCGTTTCCTTATTATTTAGAGA
CAGTAATTTTGAAGTCTTTTGAGGAGATTTCTATAATTGACTAGTTTCTG
CTTGTTTCAAATATCTTGTGTTTGATAACTGTAGATCCTTACCCATCTGG
CTTTTTAAATAAAATTATTCTCAATTTTTTTTACAGAATCTTCAATGCAG
ATTCAAGAAATCCAGCGTCGGAGCTGACGATACCGGATTTGTTGATATCC
CAAAAGGCAATGAAGATGCTTTGAAGAATGCCTCAGCCACTGTCGGTCCA
ATCTCGGTTGCTATTGATGCTTCACACTTCTCATTCCAATTTTACAAAGA
AGGTGTTTATGATGAACCACAATGCAGTAGCACCCAACTGGATCACGGCG
TCTTGGTTGTCGGTTATGGATCCATGAATGGACAAGACTACTGGATCGTC
AAAAACAGGTAAGAGTTGAACAAATTGATCCAATAAAACATTCTATCGTA
ACATCTTGAAAAAAAAATCGATTTAAACAGCACACTAAATTGAAACTGCT
ATTGAAAACAATCATCGAATATTTTAAAATATAATTTAATGATTTTTGTT
TTCTTTCTTTTTTTAGCTGGGGACCAGGATGGGGCTTGAAAGGATACATC
ATGATGAGCCGTAACAAGAACGACCAATGCGGTATCGCTTCATCCGCATC
TTACCCACTCGTCTAA Coding sequence (CDS) from alignment at sc0000019_pilon:580601..582466- >XLOC_041976 ID=XLOC_041976|Name=XLOC_041976|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1980bp|location=Sequence derived from alignment at sc0000019_pilon:580601..582466- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGAAACTATTTGTTCTGGCCAGCATTGCAACAGCTGCTCTGTGTAT
GACCATTGAAAAAGCTGAATTAATTGCAGATGAAGGATGGCAATTATGGA
AATCTACACATAATGCAGCTTATGCGGACTTTAATGAAGAAAAAGTTAGA
TATACAATTTGGCAAGACAATGTTAGACGTATTACCCAATTCAATCGTAA
CAACAAAAAGATGTCTTTAGGTATGAATCATTTTGGGGATATGACAACTA
CTGAATTCAAAGCGAAAATGAATGGTTACTTGGCTGGAAGCAAACAACAA
GGATCTACTTTCATGACTCCAAACTTTGCTGAGATTCCAGATTCTGTTGA
TTGGAGAAAAAAGGATGGATATGTTTCTGAAGTCAAAAATCAAGGACAAT
GTGGATCATGCTGGGCTTTCTCTACTATGATGAAACTATTTGTTCTGGCC
AGCATTGCAACAGCTGCTCTGTGTATGACCATTGAAAAAGCTGAATTAAT
TGCAGATGAAGGATGGCAATTATGGAAATCTACACATAATGCAGCTTATG
CGGACTTTAATGAAGAAAAAGTTAGATATACAATTTGGCAAGACAATGTT
AGACGTATTACCCAATTCAATCGTAACAACAAAAAGATGTCTTTAGGTAT
GAATCATTTTGGGGATATGACAACTACTGAATTCAAAGCGAAAATGAATG
GTTACTTGGCTGGAAGCAAACAACAAGGATCTACTTTCATGACTCCAAAC
TTTGCTGAGATTCCAGATTCTGTTGATTGGAGAAAAAAGGATGGATATGT
TTCTGAAGTCAAAAATCAAGGACAATGTGGATCATGCTGGGCTTTCTCTA
CTACTGGAGCTTTGGAAGGACAACATTTCAGAAAGACCGGTCAAAAGGTT
GATTTGAGTGAACAAAACTTGGTTGATTGCTCTAAAGATTATGGAAACTA
TGGATGTCAAGGTGGATTAATGGACAATGCTTTCAAATACATCAAAGCCA
ATGGGGGGATTGATACTGAGAAAAGTTACCCATACGAAGGAAAAACTGGA
GCTTTGGAAGGACAACATTTCAGAAAGACCGGTCAAAAGGTTGATTTGAG
TGAACAAAACTTGGTTGATTGCTCTAAAGATTATGGAAACTATGGATGTC
AAGGTGGATTAATGGACAATGCTTTCAAATACATCAAAGCCAATGGGGGG
ATTGATACTGAGAAAAGTTACCCATACGAAGGAAAAAATCTTCAATGCAG
ATTCAAGAAATCCAGCGTCGGAGCTGACGATACCGGATTTGTTGATATCC
CAAAAGGCAATGAAGATGCTTTGAAGAATGCCTCAGCCACTGTCGGTCCA
ATCTCGGTTGCTATTGATGCTTCACACTTCTCATTCCAATTTTACAAAGA
AGGTGTTTATGATGAACCACAATGCAGTAGCACCCAACTGGATCACGGCG
TCTTGGTTGTCGGTTATGGATCCATGAATGGACAAGACTACTGGATCGTC
AAAAACAGAATCTTCAATGCAGATTCAAGAAATCCAGCGTCGGAGCTGAC
GATACCGGATTTGTTGATATCCCAAAAGGCAATGAAGATGCTTTGAAGAA
TGCCTCAGCCACTGTCGGTCCAATCTCGGTTGCTATTGATGCTTCACACT
TCTCATTCCAATTTTACAAAGAAGGTGTTTATGATGAACCACAATGCAGT
AGCACCCAACTGGATCACGGCGTCTTGGTTGTCGGTTATGGATCCATGAA
TGGACAAGACTACTGGATCGTCAAAAACAGCTGGGGACCAGGATGGGGCT
TGAAAGGATACATCATGATGAGCCGTAACAAGAACGACCAATGCGGTATC
GCTTCATCCGCATCTTACCCACTCGTCTAACTGGGGACCAGGATGGGGCT
TGAAAGGATACATCATGATGAGCCGTAACAAGAACGACCAATGCGGTATC
GCTTCATCCGCATCTTACCCACTCGTCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000019_pilon | genome | sc0000019_pilon:580601..582466 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 892-990:100 |
| Aaloc | 619-888:531 |
| Aaloc | 427-618:1036 |
| Aaloc | 1-426:1867 |
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