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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000043_pilon:1530118..1533636- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_030413 ID=XLOC_030413|Name=XLOC_030413|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3519bp|location=Sequence derived from alignment at sc0000043_pilon:1530118..1533636- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATTGTTGTCATTGCGCCTATCCCATTGCATCTAATCAAGTTTTTTG
TACTGCATGTGGTAAACGAAATACTACACAAAATACTGGTGCCAGCACAA
GTACATCAAATCAAGGAAAAAAAACATTCCAGCAATTCTTAGAAGAGAAG
AAGACTGATCGTATATGCAAGTCCAAAAAACAAAAGATTTCTAAAGTTAC
TGTTAATGTCTCTGTTTTAAATGAATTTGTTGGGCAACAGTTCGAGACTT
ATTACAAACAAGTACCAAACTCCCGTCTCCCACTTGAATGTGAGCCTCAA
TGGGACTACTACAAATTACGAGAAGCTGCTTTTGATAAACAAAAACGTTA
CAACAAACTGATTGCATCAAAACAGCTGGAAGATGTAAAACTTGTATATA
ATAAGGATGGTGATATTTGTAAAACAATTCCAGGAACTAACATTCCATTC
ACATTGGAAAAATATCAAAGAGATATCTGTAAGAAATACAAAGATATGTT
GTTTTATCTGTTGCCAATGTTCATTGAAGACGAAGACGATGATGAACCGC
TTCCATCTGCACTAAGCAAAAGACAAAAGTAAGCAATCAATATCTTTTGG
TTTACCTTTCAGAAACAATTTTTGGCAGAATTTAAATTTTTTTTCTATTC
AGGAAAAGTTTTGAGGAAATGTAAATAAAACATTACAAATTTTGAAGATT
GTTGCAGGAGAAAGATTCTACCAGGATTTCTTTCAAAAATAATTCAAAAT
TGGGCTTAAAAGTCAAAAATGCTAACAAAAATTTGACAAAGTTTGACGTC
TTTGAGATTGTGACCATATTTTTTCCATGAGGAAATTAAGACACCAAATT
TGACCCTGGTCTACAGTAGATTCTGTCTTCTTGTGAGCTGCTTTAAAGTG
TACCACTTACTTAGCAACCCTGTCAAACCAGTAAGATCCCACCCGCCTCG
TCCTTATTAATATGGGTAGTGCCAAAGGCTAAAAGAAGATATCTTAAAGC
TATATACAATTTTCTTTCTAGTACTGTATCACAGTAAATTATTAATTCAA
TGCGTTTTTTTTTAGTGACGAGAATCCAGTGAATCCATTACCTTTCAATA
TCTTTGATACAGGAGCAGCAATATCATTCAACAATAATAGTATTTTTGCA
TGATAAAAATCATTAATATTGTGTTTTTATTGTGATTTATGAAATGTTTT
TTGAATTGGCTTCTCACAAAAATGACATTTTGGCTTCATTTGATTATTCC
TGATAATTCATAACATTTTTTCAAATCATTACACTACTATACAGTTATCT
AAGAATTCCAATCTTAATAACTCAATATTTATTGAATTTCAAAATTCTTT
TAGGTCTGTGTAATTTAAGATGCACGATTCATGCATAATTCATGCTAATC
ATTTTAATGCATGCATATTATAGATAATGTTTAAGTGGGTTCTTTTGGTT
TGCTTAAAAGTTAAAAAATATAACATTCGTATTTTCGTCTGATCTAAATA
TTTTTCGACTGTTTTTATTTATCAAAACTCAAGATTTACTAAGGCAAATT
TCTGAGGAAGTAGGACAAGAGAGGTATTTCCAAACTTTGTAAACCCTCAC
TTTATGGGTATTTCTGTTAATTTAACTCACCCAGTCATTCTTTTATAAAA
AATGAGTTGGGTAAAAAAAAAGTTAAAACATTCAGTAGAAATTGTTTAGT
TATAAATATTGAAATATAGCGTAAAAAAATAATGCCTTTAAACGGCTGGT
TTATTTTGAATTCAAAATTGTATTTCTCTATTGATAGGCTCTACAGTTTC
TGCAAATCCACACAACTCTACTGTCGAATTTGGAGCCAACTCTCAGAATG
ATCAGCTTCTTTCTTCAGTCACGCATCCCTGGAATCATGGTAAGTTTGTT
GATAAGTGAAAATTTTTAATTAAAGCAGGTTTGTGAAAATTTATCATTCA
AGCATATTAAAGAATGTTCTCCTAGTATATTCCTTTCTTTTGACACTTTG
TATTGATGAAATGTTTTTTGTTATTGACAGCTTCAATGGATTCTGCCGCC
GCTCGCAACACCTCTTTTGAATATTCAACAAATCATGTGAACAATCAACT
CAGTTCTTTGATTGCACCTGCTTCAATTGAGGGTATGTTTTTAATTGTGT
TGAGTGTTTATAGCCCCCCCTTAAAAGTGAGGTTACACCCCAAAAAAGAT
GGAGGCTAAATCTGTTTCAAATATTTCGAGGGGGGGGGGCTGGCTAGAGT
TTACCATACTTTTGACTTTCAAGTATAATCGGTCTGTCTCTTTCTGTCGT
TTTGTATTTTCTCTTTTTTACTCTTTTTTTTGCGAGAATATTTTACTGAT
ATGCTTCAGGAAGAAGTTTAAAAGTAAAAGACTGAGGACTGAAATTCAAT
GGGGATTGATATACCCACGTTTTTTATGACTGGGTATTCAAATTCCATTA
TTTTCAAATCAGAGAAGTCACAATGTTTTGCAGTGAGGATTTATTTATTT
AATCATTTTCAGCGGAGATAGAAACTTCCACTGGAGATGATATTTCCAGT
GGGAGGGGCTCCTGCAAGAACAGTATTTTAAACTTAATTTCTAATGGAGA
TGAAAGTGCACTGTATTCTTGTGATATTTCAGTGTTTTCAGGGTGATAAT
AGTACAGTTAAAGGTTCGTATGAGTGATTACTTTTAGAAGGATCGTTTAA
TGATTTTTCTAGTACTGATCACTCATAAAGAAGAACAAACACACCCAGGG
GTGGATCTAGCGAAACTGCTTTATGAGGGTAACTCGAATCGGGCAAGCAA
TTAATAAAGAGTTAATTAGTTAAAAAATTATTTGCTTTTACAGGCTTTAA
TAATTCATTTGAGGAAAGTATCTCATATAATTTAAAAAGAGAGAATTGAC
CATATTACTTGGAGGTATATTGATCATTTGTGGTTTTTTCTTACGCACGC
GCACAATAGCACGTCAAAAAAACACTTTTCAGCCTGTACTCGTCAATTGA
CAATGGCGCGCACAGGCCCCGACAAAGTCAAATCTTTTCGACCAGTTGCT
TTTAAAATTTTTGGCTTGGACCTAAACCTAGGCTGACGCTATGTATCAGT
CAACAAAGTTCGAATACAGTAGTTACTGCTTGACACACCTAGAATCGAGT
CTGACAAAGACGCGCCTTCATTAATCTCAGAATGTACGTATGTACATCAG
ATTATATGAATTAACTTTAACAAAAATCAACTCCTTAAACTCGGAAGAAA
ACTGATAATTATCATGGCGACTAAGTAAAGCTTTTCCCAATATCACTTTT
TGTAAAAAAATATAGCCTTGACTTCCACAAAAAAAAAGCCTTTGATTTCC
ATTTTAGATAATGAAGTTGCGCGCAGTGCATTTTAACACGTTACTATTGT
CAATTTATTATTTGTTCTTGGTAGATTCAACATATTCTACAGTTTCTCAC
AACACTTCTTTGGTTGCAAGCTCTTCGAATGACCAGCTTCTTTCTTCAAT
TGCACCAAACTCAATTCAA Coding sequence (CDS) from alignment at sc0000043_pilon:1530118..1533636- >XLOC_030413 ID=XLOC_030413|Name=XLOC_030413|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1902bp|location=Sequence derived from alignment at sc0000043_pilon:1530118..1533636- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATTGTTGTCATTGCGCCTATCCCATTGCATCTAATCAAGTTTTTTG
TACTGCATGTGGTAAACGAAATACTACACAAAATACTGGTGCCAGCACAA
GTACATCAAATCAAGGAAAAAAAACATTCCAGCAATTCTTAGAAGAGAAG
AAGACTGATCGTATATGCAAGTCCAAAAAACAAAAGATTTCTAAAGTTAC
TGTTAATGTCTCTGTTTTAAATGAATTTGTTGGGCAACAGTTCGAGACTT
ATTACAAACAAGTACCAAACTCCCGTCTCCCACTTGAATGTGAGCCTCAA
TGGGACTACTACAAATTACGAGAAGCTGCTTTTGATAAACAAAAACGTTA
CAACAAACTGATTGCATCAAAACAGCTGGAAGATGTAAAACTTGTATATA
ATAAGGATGGTGATATTTGTAAAACAATTCCAGGAACTAACATTCCATTC
ACATTGGAAAAATATCAAAGAGATATCTGTAAGAAATACAAAGATATGTT
GTTTTATCTGTTGCCAATGTTCATTGAAGACGAAGACGATGATGAACCGC
TTCCATCTGCACTAAGCAAAAGACAAAAATGTATTGTTGTCATTGCGCCT
ATCCCATTGCATCTAATCAAGTTTTTTGTACTGCATGTGGTAAACGAAAT
ACTACACAAAATACTGGTGCCAGCACAAGTACATCAAATCAAGGAAAAAA
AACATTCCAGCAATTCTTAGAAGAGAAGAAGACTGATCGTATATGCAAGT
CCAAAAAACAAAAGATTTCTAAAGTTACTGTTAATGTCTCTGTTTTAAAT
GAATTTGTTGGGCAACAGTTCGAGACTTATTACAAACAAGTACCAAACTC
CCGTCTCCCACTTGAATGTGAGCCTCAATGGGACTACTACAAATTACGAG
AAGCTGCTTTTGATAAACAAAAACGTTACAACAAACTGATTGCATCAAAA
CAGCTGGAAGATGTAAAACTTGTATATAATAAGGATGGTGATATTTGTAA
AACAATTCCAGGAACTAACATTCCATTCACATTGGAAAAATATCAAAGAG
ATATCTGTAAGAAATACAAAGATATGTTGTTTTATCTGTTGCCAATGTTC
ATTGAAGACGAAGACGATGATGAACCGCTTCCATCTGCACTAAGCAAAAG
ACAAAATGACGAGAATCCAGTGAATCCATTACCTTTCAATATCTTTGATA
CAGGAGCAGCAATATCATTCAACAATAATATGACGAGAATCCAGTGAATC
CATTACCTTTCAATATCTTTGATACAGGAGCAGCAATATCATTCAACAAT
AATAGCTCTACAGTTTCTGCAAATCCACACAACTCTACTGTCGAATTTGG
AGCCAACTCTCAGAATGATCAGCTTCTTTCTTCAGTCACGCATCCCTGGA
ATCATGGCTCTACAGTTTCTGCAAATCCACACAACTCTACTGTCGAATTT
GGAGCCAACTCTCAGAATGATCAGCTTCTTTCTTCAGTCACGCATCCCTG
GAATCATGCTTCAATGGATTCTGCCGCCGCTCGCAACACCTCTTTTGAAT
ATTCAACAAATCATGTGAACAATCAACTCAGTTCTTTGATTGCACCTGCT
TCAATTGAGGCTTCAATGGATTCTGCCGCCGCTCGCAACACCTCTTTTGA
ATATTCAACAAATCATGTGAACAATCAACTCAGTTCTTTGATTGCACCTG
CTTCAATTGAGGATTCAACATATTCTACAGTTTCTCACAACACTTCTTTG
GTTGCAAGCTCTTCGAATGACCAGCTTCTTTCTTCAATTGCACCAAACTC
AATTCAAATTCAACATATTCTACAGTTTCTCACAACACTTCTTTGGTTGC
AAGCTCTTCGAATGACCAGCTTCTTTCTTCAATTGCACCAAACTCAATTC
AA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000043_pilon | genome | sc0000043_pilon:1530118..1533636 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 859-951:94 |
| Aaloc | 757-855:1488 |
| Aaloc | 655-753:1731 |
| Aaloc | 580-651:2454 |
| Aaloc | 1-576:3520 |
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