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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000080_pilon:807978..809888- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037472 ID=XLOC_037472|Name=XLOC_037472|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1911bp|location=Sequence derived from alignment at sc0000080_pilon:807978..809888- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGCCTAATACAACTGATCCTTACAGACAACCAGTGGTACAAGACCT
TACAAAAAATGATGATTCTGATCACGAATCTATCTCGTCCAGATCATCAA
GATCTTCAAGATTGTCAATATCCTCAAAATCGCCAAGATCGCCAAGGTCC
TCAAGATCCTCAAGATCCTCAAGATCTCCAAGATCGCCAAGGTCTCCAAG
ATCGCCAAGCAGGACTCCAGGATCACCAAGATCACCAAGGTCCTCAAGAT
GTTCAAGATCCTCAAGATCATTGTCGAGATCCCCGTCACGATCTCCCTCC
CGATCGGGGGACTCTGATGATAATGACTATGTACATCGTGTTAGAGTGAA
AAAAGGAGGTGGTAGATACAGAACTATACGTCTTACAAATAAACGCAGAG
GTAGATATCGCGGTGATTCTAATAGACATGCTTCAAATGTAAATTCATTT
CTTCAACAGCCGAATAATGTAAATGTAACAATGGCTTTCTTTCATGGTGC
TACGAACACTGTCACACACGCTTTCCCTCCGCAACCCTACATTATACCCA
ACCGCTTTCCTCCTAGATTTGTCGGCGCCCCACCACGTCCATTTATGGGA
CCTCCTGTTATGTCTCCAAATATGATAAGGAGTCCAATTATACCAAATCC
AAACCCAAGGATGCGTCAAAATGCACCAATCGTACGGCCGTCAGCTCCTG
GTCATCCACTTCTTCGTCCACCTCAAAGCCAAAACCCTTCAAAGATTGAT
TTAACGAGTCCACCGCATTCACCACCTCGCAATGTTTCAAAAGTTCAAAA
TCCTCCACCAAAAGAAAAAGCTGTAGTGCAGTATCCATGGGACTCCGTGG
CACCTCGTAAGAGTGATTTATCATTATCAATTCCTAGCACCGAAACGTTA
ACCTCAGAACAATCTCAACTCCAAAGTCCCCCGCCTTGGTTTAATAAAGG
CAGGGATATTCAAGAAATCAGGCATAATGTCTCTCGAATACAAACTCCAG
AGCAAACTCCAGCAAAAACTCCCCCGCCTTGGTTTAATAATGGCAGGGAT
ATTCAAGATATCAGACATGATACCTCTCAAATAAAAACTCCGGAACAAAC
TCAAGCAAAAGCTCTCCCGCCTTGGTTTAATAAAGGTAGGGATATTCAAG
ATATCAGGCATGATGCCTCCCAAATACAAGCTCCAGAACAAACTCCATCA
AAAACTCCCCCGCCATGGCTTAAAAACACAAATACCCCAGATAAAAGTCA
TGCATCACCGTTAGGCTTTGGAGTATTTGGACCAAAGAAAAGTAGAGAGG
AGTTGAAAGACATTTACCGACCCACATCCCCTACAACAGACGAACCTGTC
ATTGATCTTGCAGAGGAGCCTCCATTAGAGATATCATCACCTAAACCAAA
GCTAAGATCTATTTTGAAAAAAGCTACGAAGGAGTTTAAAACAAGTGAAA
CAATAACAGTACCTAAACATGGCGACTTCGACGATTCGACAGATTCGATT
GAAAAAGCACCAACAGAACCGATTGCCAAAACGCCGACAGAATCGATTGC
CAAACCGACGACAGAATCGATTGCCAAACCGATGGCAGAATTGATTAACA
AACCGACGACAGAATCGATTGCCAAACCGATGGCAGAATTGATTGCCAAA
CCGACGACAGAATCGAGTAACAAACCTACGACAGAATTGATTGCCAAACC
GACGATAGAATTGATTGCCAAACCGACGACAGAATCGATTGCCAAACCGA
CGACAGAATCGAGTAACAAACCTACGACAGAATTAATTGCCAAACCGCTG
ATAGAATCAAATCATGATCGAATGAATAAATTGAGCCATCGTAAAATCAA
CGGCGAAGAGTATAATTTTGAAATTGACGACGACAGACGATCACCGTCAC
CATCACCGGAG Coding sequence (CDS) from alignment at sc0000080_pilon:807978..809888- >XLOC_037472 ID=XLOC_037472|Name=XLOC_037472|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3492bp|location=Sequence derived from alignment at sc0000080_pilon:807978..809888- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGCCTAATACAACTGATCCTTACAGACAACCAGTGGTACAAGACCT
TACAAAAAATGATGATTCTGATCACGAATCTATCTCGTCCAGATCATCAA
GATCTTCAAGATTGTCAATATCCTCAAAATCGCCAAGATCGCCAAGGTCC
TCAAGATCCTCAAGATCCTCAAGATCTCCAAGATCGCCAAGGTCTCCAAG
ATCGCCAAGCAGGACTCCAGGATCACCAAGATCACCAAGGTCCTCAAGAT
GTTCAAGATCCTCAAGATCATTGTCGAGATCCCCGTCACGATCTCCCTCC
CGATCGGGGGACTCTGATGATAATGACTATGTACATCGTGTTAGAGTGAA
AAAAGGAGGTGGTAGATACAGAACTATACGTCTTACAAATAAACGCAGAG
GTAGATATCGCGGTGATTCTAATAGACATGCTTCAAATGTAAATTCATTT
CTTCAACAGCCGAATAATGTAAATGTAACAATGGCTTTCTTTCATGGTGC
TACGAACACTGTCACACACGCTTTCCCTCCGCAACCCTACATTATACCCA
ACCGCTTTCCTCCTAGATTTGTCGGCGCCCCACCACGTCCATTTATGGGA
CCTCCTGTTATGTCTCCAAATATGATAAGGAGTCCAATTATACCAAATCC
AAACCCAAGGATGCGTCAAAATGCACCAATCGTACGGCCGTCAGCTCCTG
GTCATCCACTTCTTCGTCCACCTCAAAGCCAAAACCCTTCAAAGATTGAT
TTAACGAGTCCACCGCATTCACCACCTCGCAATGTTTCAAAAGTTCAAAA
TCCTCCACCAAAAGAAAAAGCTGTAGTGCAGTATCCATGGGACTCCGTGG
CACCTCGTAAGAGTGATTTATCATTATCAATTCCTAGCACCGAAACGTTA
ACCTCAGAACAATCTCAACTCCAAAGTCCCCCGCCTTGGTTTAATAAAGG
CAGGGATATTCAAGAAATCAGGCATAATGTCTCTCGAATACAAACTCCAG
AGCAAACTCCAGCAAAAACTCCCCCGCCTTGATGAAGCCTAATACAACTG
ATCCTTACAGACAACCAGTGGTACAAGACCTTACAAAAAATGATGATTCT
GATCACGAATCTATCTCGTCCAGATCATCAAGATCTTCAAGATTGTCAAT
ATCCTCAAAATCGCCAAGATCGCCAAGGTCCTCAAGATCCTCAAGATCCT
CAAGATCTCCAAGATCGCCAAGGTCTCCAAGATCGCCAAGCAGGACTCCA
GGATCACCAAGATCACCAAGGTCCTCAAGATGTTCAAGATCCTCAAGATC
ATTGTCGAGATCCCCGTCACGATCTCCCTCCCGATCGGGGGACTCTGATG
ATAATGACTATGTACATCGTGTTAGAGTGAAAAAAGGAGGTGGTAGATAC
AGAACTATACGTCTTACAAATAAACGCAGAGGTAGATATCGCGGTGATTC
TAATAGACATGCTTCAAATGTAAATTCATTTCTTCAACAGCCGAATAATG
TAAATGTAACAATGGCTTTCTTTCATGGTGCTACGAACACTGTCACACAC
GCTTTCCCTCCGCAACCCTACATTATACCCAACCGCTTTCCTCCTAGATT
TGTCGGCGCCCCACCACGTCCATTTATGGGACCTCCTGTTATGTCTCCAA
ATATGATAAGGAGTCCAATTATACCAAATCCAAACCCAAGGATGCGTCAA
AATGCACCAATCGTACGGCCGTCAGCTCCTGGTCATCCACTTCTTCGTCC
ACCTCAAAGCCAAAACCCTTCAAAGATTGATTTAACGAGTCCACCGCATT
CACCACCTCGCAATGTTTCAAAAGTTCAAAATCCTCCACCAAAAGAAAAA
GCTGTAGTGCAGTATCCATGGGACTCCGTGGCACCTCGTAAGAGTGATTT
ATCATTATCAATTCCTAGCACCGAAACGTTAACCTCAGAACAATCTCAAC
TCCAAAGTCCCCCGCCTTGGTTTAATAAAGGCAGGGATATTCAAGAAATC
AGGCATAATGTCTCTCGAATACAAACTCCAGAGCAAACTCCAGCAAAAAC
TCCCCCGCCTTGGTTTAATAAAGGTAGGGATATTCAAGATATCAGGCATG
ATGCCTCCCAAATACAAGCTCCAGAACAAACTCCATCAAAAACTCCCCCG
CCATGGCTTAAAAACACAAATACCCCAGATAAAAGTCATGCATCACCGTT
AGGCTTTGGAGTATTTGGACCAAAGAAAAGTAGAGAGGAGTTGAAAGACA
TTTACCGACCCACATCCCCTACAACAGACGAACCTGTCATTGATCTTGCA
GAGGAGCCTCCATTAGAGATATCATCACCTAAACCAAAGCTAAGATCTAT
TTTGAAAAAAGCTACGAAGGAGTTTAAAACAAGTGAAACAATAACAGTAC
CTAAACATGGCGACTTCGACGATTCGACAGATTCGATTGAAAAAGCACCA
ACAGAACCGATTGCCAAAACGCCGACAGAATCGATTGCCAAACCGACGAC
AGAATCGATTGCCAAACCGATGGCAGAATTGATTAACAAACCGACGACAG
AATCGATTGCCAAACCGATGGCAGAATTGATTGCCAAACCGACGACAGAA
TCGAGTAACAAACGTTTAATAAAGGTAGGGATATTCAAGATATCAGGCAT
GATGCCTCCCAAATACAAGCTCCAGAACAAACTCCATCAAAAACTCCCCC
GCCATGGCTTAAAAACACAAATACCCCAGATAAAAGTCATGCATCACCGT
TAGGCTTTGGAGTATTTGGACCAAAGAAAAGTAGAGAGGAGTTGAAAGAC
ATTTACCGACCCACATCCCCTACAACAGACGAACCTGTCATTGATCTTGC
AGAGGAGCCTCCATTAGAGATATCATCACCTAAACCAAAGCTAAGATCTA
TTTTGAAAAAAGCTACGAAGGAGTTTAAAACAAGTGAAACAATAACAGTA
CCTAAACATGGCGACTTCGACGATTCGACAGATTCGATTGAAAAAGCACC
AACAGAACCGATTGCCAAAACGCCGACAGAATCGATTGCCAAACCGACGA
CAGAATCGATTGCCAAACCGATGGCAGAATTGATTAACAAACCGACGACA
GAATCGATTGCCAAACCGATGGCAGAATTGATTGCCAAACCGACGACAGA
ATCGAGTAACAAACCGACGACAGAATCGAGTAACAAACCTACGACAGAAT
TAATTGCCAAACCGCTGATAGAATCAAATCATGATCGAATGAATAAATTG
AGCCATCGTAAAATCAACGGCGAAGAGTATAATTTTGAAATTGACGACGA
CAGACGATCACCGTCACCATCACCGGAGCGACGACAGAATCGAGTAACAA
ACCTACGACAGAATTAATTGCCAAACCGCTGATAGAATCAAATCATGATC
GAATGAATAAATTGAGCCATCGTAAAATCAACGGCGAAGAGTATAATTTT
GAAATTGACGACGACAGACGATCACCGTCACCATCACCGGAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000080_pilon | genome | sc0000080_pilon:807978..809888 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1585-1746:163 |
| Aaloc | 1033-1581:787 |
| Aaloc | 1-1029:1912 |
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