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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000032_pilon:1806006..1810071- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037891 ID=XLOC_037891|Name=XLOC_037891|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4066bp|location=Sequence derived from alignment at sc0000032_pilon:1806006..1810071- (Clytia hemisphaerica_ch_hm2_pilon)
GCGTTCGATCTTGTGGAGCGCGTACGGAAATCGTTCATCGACGGCTTAAA
AGACATCAACTGGATGGACGACATCACCAAAATGTCAGCACAACACAAAG
CAGAAGCCATCATTCAGAAGATTGGATATCCAGAGTATATTTTAAAGCCC
AAGGAATTAGATGAATCGTATAAAGGGGTAAATGAATGAATTAGTTATTT
TTCTAAGATTATTTTAACCATAAAACTATTCAAGTCAGATAATTATCAGT
TGGGAATATTTCACAGGGAAAGATTTTCGTTCAATCCTTTATTTCTCGCA
ATATTTCCATAGCTTTATTTCTTTGATATGTGGTTAGCGTGTAATCAAGC
CCTACAAATTTTAGTTGGTTGATTAGCTGGCTGCTGGTACTGCACGTTAG
CAATCGGTCATTTTATTTTGTTTTAAGCCTTAATTGATTTTTATTTAATG
GTTAACTTTTAATTTTTGCCATTTGACTTGATTTTCCCGAGATGGTTTGT
AAACCACTGTGCGGATGTTCTCCCGTTTTCCGCATTTTAATCTAACCTGG
TGATTCTCTTTTCTAGCTGGATTTCAGTGAAACAGACTATTTCCTGAACG
TTTTGACCGATCAGCGATGGAGCATTCATAATTCGTTAACGCAATTACGT
AAGCCAGTCGACGTAAGGAAATGGTACATGACGCCGCCCACCGTTAACGC
CTACTATGAACCAACTGAAAACGAGATAGGTTTGTTTTATTACTATCAAT
ACCTTCTGGACCTTTCAGATTCGTCCATTACGCCATTCATATAATACGTT
CGCAGTGAGGCAAAAGCGTACGTCTATTATTCGAATGACGTCATTTTTCT
CTGCGTTCAAGGGGTAGATGTCAAATGTTTGGATAGTTTTTACGTACGTA
CCATATCGATGACCCCGCCAGGAAAACAATTATGCCCATGATGATAAGTT
CATTTTTGGAAGGTCGCCACTTTCTAGAGTTCTACAAGAAGTTGAATTTT
GCTTTTGTGATGATAATCAAAGTGAGGTTTTGATTTTGTTATACTTACAG
TTGACGCTCACTAATTCGACTTTCAAGGGGAATTGATTTTCATCCAATAA
AGAAGCATATTGAATAGTAGGGCGTCGTTCATGAGAGTTTCTTGTTGACG
GTGACTTTCCGACATCGAGTTAAAGAGTGTCAATTGTATCCTTTTTGTTA
ACAAACAATACTTTTGTTGATTTAGTATTTCCAGCTGGCATCCTTCAGCC
ACCATACTTCCAATCGAACTATCCGAAATCTGTTAACTTTGGTATGATGG
GGTCTATCATCGGACACGAAATCACTCACGGCTTTGACAACAATGGTAAG
ATTAAACGACTTACAGAGTGCCTTTTACAAAAATTATCTGAAGTACGATC
TTCTATAACTTTTGATGTGAGAAATCTTCATCTCGGAACTTTACTGTCAA
CAATTTTCTTACATGTTTTCATATCTTCACATCAGCAGTGGTCTCTGATG
AACAGGAACAGTTCTAGGGTTTGGAAAATAAAATCTAAGGCTGGAAATTA
CGGATGATTAAAAAGCGCTTCTGGTGAATTTATATGAATTTAAAGAAAAT
GGTTTAGCGATCGTGTTTCACTAGAACCTGAAAATTTAGAATCTCTACTC
TTAGGTTCCAAATAAGCGCCCCCCCCCCCCGCTTGTTAATTTTTCGAAAA
TTTTCAACTCCCCCCCCTCCTGGAACTTATTAGGACCTTCCGTTTATTAA
TTTTTAAGAATATCTTCAGCTGTCAAAATTTTTTCTCTAAATAGCCTAAT
ATATTTATCTTATTTTTGGGTTTTCAGAAGTACAATTTCCAACCCCCCGG
CAATTAGGTCCCCCGCCCGTTTTATTAAATCTCGAAAATTTTCCACCCCC
CCCCCAGTTTATTCGAACCCCCCCCCCCCCTACCTTCCGTTTATTTGAAA
CCTAAGAGTAGATACACTGTTAAAAATTGTTCCGTCTCAAACGGATTCCC
GTCTGAGTGAAGTATATAAAGAGGCTTTAACGTCTCAAAATTCTGAATAA
TGTGCATGAGATTTCAAGAGTATGTGCCACTCTGCTGTGTAAAATCCATT
TCCAGTCTCGGACGAAAACTCTCGCTTTCACCACTGTAGAGCAGTTTCTC
ATTTTTTAAAATTTTGTTTCATTAGGACGTCAGTACGATAAGCATGGTAA
TTTTGTTTCTTCATGGTGGTCAGCTTCGGTCGTTGATGAATATAAAAAGA
AAGCCAAATGCTTTGTTGATGAATACTCCAAGTTCAAAGAAGCTGGAAAA
AATGTATGATTTTTGATTTTACCGAAAAACAGCCAATTCCGCCAAAACGT
ATCCGCCATTACGTTTACAATGTACGCCATACCTTTGAAAAAGAATTCTC
CTGTGCATACCTTATAGACATGAACAGACTAAATACATTCTTAATGGGTT
TGATTTTAAAGAATAAGTTTTTTAGTACGTGGTCAAAAAAATTAGAATTG
ATACTTTGTTTTTGAATTTCTGGACGGAAGAGATTTTATATGTGACTGTA
TGTTTTTGTTATTATTTGCAGATCAGAGGTAATGAAACGTTAGGTGAGAA
TATTGCTGATAACGGTGGTTTGAAAGCCGCTTATAGGGTGAGTAGAATTT
CCCGAGGACAGACATGATTTTTTCAAACATGTCTATGATGAAAAGTCTCG
ATTCCAATAACTTGTACACGAGCAACTTGAAACATTGAAATAGTGAAAGA
GAGAATCAGTAGGCTTTCAAGAATTAGAAAGTCCAAGGCGAACTCGAGAT
TAGACTGTGTTTCGCAACCACGAACACATTTCTAGTAAAGAAGCTCAATT
TATGGCGAGTCAACTGTACTCCCACTCGAGAAACATTCCCCTTTTCTAAC
CATCCAATAGAAAAGCTGAATAGCGTTTCGTAGTGCAATCCGTTTTGTAT
TTGCCACTCTTGGCTACTTTTGGATATTGATATCTTTTTATATATTTCAA
TTTTCCAATTCTGTTTAGGCTTACAAAGAGTACACTCGTTCAAGTGGTGA
CGAGAAAAGATTACCTGGTGTTAACCTGAACAACGACCAAGCCTTCTTCG
TCTCTTTTGCTCAGGTAAGGCCCAACTTATTTCAATCTGTTGTTAGGTTT
TAATTCAGACATTGTTGATTTAATTTTATAAAAGCTGGAATTTGGTTGTA
ATGTACCCTTTTACCAGGATTTTGATATTTTTTATTATTTACTACCCCAT
AAGGCCACTTGAGACTTTGAGAGCCTGGGTGCGGGCCAAGACAAAGTAAA
CATTTTTTACCGGGTTATTTTACTACACTACTGGCACCAGTGTAAGTTTA
AAGCTGTTATAAAAAAAGATTTTTAGACTAGCTAGCCTCAGTCTTAAAGA
AAGCTCTCTAAAGCCTTCCATATGGCGAGTCAAAAATAAATAGAATCTCT
CTTCTCTCTTTTAGTCGTGGTGCACAGAAGAATTGAACCAAGTTCTCATT
CATCAAGTCGAAACTGATGTTCATAGTCCGGCTATCGAGAGGTAAGGGGT
TTATGATCATTTTCAAACCAATCGTCATAATTTTAGAACCCTTATGAGAT
CATCATAAATCGCAATTATGATCAGAACTTAAGTTGAAATTCTCAAATTT
GGAATTGGTCTAGAAAACATTCACCTGTTGCAATGCAAGTTTTCAAAATT
GAGATGAGTTGCTTTCTTTTAATGTGATTAGATTCTGCGAGATCAAATTT
TGCATTTTTGCGAGATTTTTTAATTTGGACGATTCTTTGATATGACGGAT
TTTTGACCTTACAAAAGTAAACTCAGATGAAAGACCTTATCTTATAAAGT
ATAACCATTTCTAAGATATGAATGAATATGGGAACACCAGTAATGTATGT
CGATGGGTATCCCTTTTTAGTGGCTATTGATTATCATTTAAACTAAATTA
TAATTTATTTTCATAGGGTGAGAGGTTCGGTACAAAACAACCGCGACTTT
GCAAGAGTATTTAATTGTCCAGTCGGTTCACATATGAATCCGAAAGAGAA
ATGTGAAATATGGTAA Coding sequence (CDS) from alignment at sc0000032_pilon:1806006..1810071- >XLOC_037891 ID=XLOC_037891|Name=XLOC_037891|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1854bp|location=Sequence derived from alignment at sc0000032_pilon:1806006..1810071- (Clytia hemisphaerica_ch_hm2_pilon)
GCGTTCGATCTTGTGGAGCGCGTACGGAAATCGTTCATCGACGGCTTAAA
AGACATCAACTGGATGGACGACATCACCAAAATGTCAGCACAACACAAAG
CAGAAGCCATCATTCAGAAGATTGGATATCCAGAGTATATTTTAAAGCCC
AAGGAATTAGATGAATCGTATAAAGGGGCGTTCGATCTTGTGGAGCGCGT
ACGGAAATCGTTCATCGACGGCTTAAAAGACATCAACTGGATGGACGACA
TCACCAAAATGTCAGCACAACACAAAGCAGAAGCCATCATTCAGAAGATT
GGATATCCAGAGTATATTTTAAAGCCCAAGGAATTAGATGAATCGTATAA
AGGGCTGGATTTCAGTGAAACAGACTATTTCCTGAACGTTTTGACCGATC
AGCGATGGAGCATTCATAATTCGTTAACGCAATTACGTAAGCCAGTCGAC
GTAAGGAAATGGTACATGACGCCGCCCACCGTTAACGCCTACTATGAACC
AACTGAAAACGAGATAGCTGGATTTCAGTGAAACAGACTATTTCCTGAAC
GTTTTGACCGATCAGCGATGGAGCATTCATAATTCGTTAACGCAATTACG
TAAGCCAGTCGACGTAAGGAAATGGTACATGACGCCGCCCACCGTTAACG
CCTACTATGAACCAACTGAAAACGAGATAGTATTTCCAGCTGGCATCCTT
CAGCCACCATACTTCCAATCGAACTATCCGAAATCTGTTAACTTTGGTAT
GATGGGGTCTATCATCGGACACGAAATCACTCACGGCTTTGACAACAATG
TATTTCCAGCTGGCATCCTTCAGCCACCATACTTCCAATCGAACTATCCG
AAATCTGTTAACTTTGGTATGATGGGGTCTATCATCGGACACGAAATCAC
TCACGGCTTTGACAACAATGGACGTCAGTACGATAAGCATGGTAATTTTG
TTTCTTCATGGTGGTCAGCTTCGGTCGTTGATGAATATAAAAAGAAAGCC
AAATGCTTTGTTGATGAATACTCCAAGTTCAAAGAAGCTGGAAAAAATGA
CGTCAGTACGATAAGCATGGTAATTTTGTTTCTTCATGGTGGTCAGCTTC
GGTCGTTGATGAATATAAAAAGAAAGCCAAATGCTTTGTTGATGAATACT
CCAAGTTCAAAGAAGCTGGAAAAAATATCAGAGGTAATGAAACGTTAGGT
GAGAATATTGCTGATAACGGTGGTTTGAAAGCCGCTTATAGGATCAGAGG
TAATGAAACGTTAGGTGAGAATATTGCTGATAACGGTGGTTTGAAAGCCG
CTTATAGGGCTTACAAAGAGTACACTCGTTCAAGTGGTGACGAGAAAAGA
TTACCTGGTGTTAACCTGAACAACGACCAAGCCTTCTTCGTCTCTTTTGC
TCAGGCTTACAAAGAGTACACTCGTTCAAGTGGTGACGAGAAAAGATTAC
CTGGTGTTAACCTGAACAACGACCAAGCCTTCTTCGTCTCTTTTGCTCAG
TCGTGGTGCACAGAAGAATTGAACCAAGTTCTCATTCATCAAGTCGAAAC
TGATGTTCATAGTCCGGCTATCGAGAGTCGTGGTGCACAGAAGAATTGAA
CCAAGTTCTCATTCATCAAGTCGAAACTGATGTTCATAGTCCGGCTATCG
AGAGGGTGAGAGGTTCGGTACAAAACAACCGCGACTTTGCAAGAGTATTT
AATTGTCCAGTCGGTTCACATATGAATCCGAAAGAGAAATGTGAAATATG
GTAAGGTGAGAGGTTCGGTACAAAACAACCGCGACTTTGCAAGAGTATTT
AATTGTCCAGTCGGTTCACATATGAATCCGAAAGAGAAATGTGAAATATG
GTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000032_pilon | genome | sc0000032_pilon:1806006..1810071 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 832-930:100 |
| Aaloc | 754-828:603 |
| Aaloc | 658-753:1049 |
| Aaloc | 592-657:1496 |
| Aaloc | 466-591:1890 |
| Aaloc | 346-462:2840 |
| Aaloc | 181-342:3501 |
| Aaloc | 4-180:4067 |
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