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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000148_pilon:755216..759804- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038690 ID=XLOC_038690|Name=XLOC_038690|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4589bp|location=Sequence derived from alignment at sc0000148_pilon:755216..759804- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACCTTCGCCTATTGATTTTGGTGGGACTTGCGTTCACTCAAGGTAA
GGTCTCCAATAAAATAAATCATCACTTCGTTTTTGTTGTTTGTTGTATCG
TTTGATCATAGTATACTATGGTTTTATCGATAGTTACAGGCTCAACATCG
TGGCCTTTCATTTGCATGTCACTGTGTCCACACTTTGTTATATATCCGTT
TTTGACGAAGTAACGCTTGGCCAATTCATGGCCATCCAATGGAAGAAACG
GCGCCTTGTAAAAATCGCTTGTATTTCATAACGCTTCGGCTTTGTACTAG
CGAGGCTAAGCAAGTGTTCATTTAGACTGTTCAATGCGATATCGTAGGCC
TGTACATAAGATTTCATATGCATGGTTTGCTTTGGCAAGTTATGTACAGG
CCTACGGTATCGCACTTTACGGTCAAAATAAACCCGTGCTTAACCTCGCT
ACTATTTTAAAGTCTATCGATAAATCATATACGGATTGTCAAGAGAAAGT
TTTATTCATCGTGGTCAATTTATATTAATTCAGGATATTTCTAACACGTG
CATATTTTCGATGTCAAGCTAGAAAAAATGACAAGCAGTTTTTGCAGTTT
CTGAAGGTGTATTTTTTTGGTTTATCCCAGATAAGATATAACATCAACAT
AAATAGTGTAGTAATAGAGGATAAAAAGAAAAACCTTCTAATTTGAGCTG
TTGTTTCTCTTACCCAAGCTTTACTTTTTTGGGCTATCTATTAATTTAAT
CTTTCGATCCTCTCCAATTGTGGTACCCGGGAGGGGATTTTCCTGTTGTG
GTATCTGTCCACAGATTTTGAAGCCTTTTGATGTCATAACTTTTCGAGAT
CTAGGCCCATAAGTGTGTTTTTGAAACTTTCTTATTTCACCGCATTATGT
GATTATTTTTAGATTCCAAAAAGCCTTAAATTGTTCTTAATAGTAGGGGG
CCAAGCCTTTTGTGTTTGAGTCAGAGAGTTCCTGTAATACATTTTTTACT
CAGAATTTCATGCTATTTCAGATGGTACCAATCATTTTCGTTTATTTTGA
CTTTTGAAAATCAGCTACTTTCCTACCCCTCATTGTCCCTTGTAGTTTTA
GCTATGGCGTCACTATTTTGGTCATAAAACGTTTTCCCGGGCCTAATCCG
CGTCCTCTCTCTCAAAAATATCTTATAATATACTGCTCTTTGGAATAGGC
TAAAAATTGCTAGGTCGTAAAAAAGATAAGGGACCCCAGGCTTGGCCCCT
ACGATAATGTGTTTTTAAAATTTATGTTATTATATATAGTTTGCTCTTAT
TAAAAACTGTGTTGAAAATTTCTCATAAACAGGCAAGGATTTGTTTGACT
TGGACGGTGTTGACGAACTTTTTCCTCATGATGAAAAAGTAGAGGGCGGT
GGGGATGAAATATTTCTCCACGATGAAAAAACGCCACAACCACAATGGCC
GCCCATAAGCTCCAACAGATGCTCACAATCAACTAAACTTAAAGTCATGT
ACGGAATCTTGCATTTTGAAACATCTCTCAAAAAGAAACCGATGACATCA
TTTGAAATTGATATTGAATGGAACGCTCTGGAATTTCATCTGACTGAAAA
TACGAAGAAACATGGAGGAGTTTATATAGCGTACACTTTCGGTATGAAAA
ACGGACCCGGAGGATATTTTGGAATACAAATTCATGCTGATGGAGGTTTG
TTTGAGTTGTTTGTGATCTAACTCATACAGTTGTTATTCTCTAATACGAC
GTCCTATTATTCGATACACTCCTATCCTATGATATTGAAAGTCACCGTCA
ACAAGAAACTCTAATAAACGACGCTCTACTATTCAATACGCTCCCCATTT
TGATAAAGATCCAAGCCCCCCTTGAAAATCGGATTATGGACAGTCAACTG
TATTGTCAATGGTGTAAATCAATGTGGAACCTTTTCCCACTAGGACGATT
AGCCCAAAATAGTCATTCTCGGTGAAATAAACTATTCTGTATTTTACATA
ATCGAATTCAGAAATCAAACTAATTGAAAGGAAGTTGAAGTATTTTCGAA
AACTAACAGCTAAAATGGCTTCACATTTTTGAAAAAATACGATTGCTTAT
GTTTAATGCAATTAAAATCAATATAACACCAGTCACCTACCAGTTTAATG
GTATTTCCAGAGAAAAGCCCTTGGAAATTACAAAAGATTTTCTCACAACA
CTTTTGACCCATCAACCAATGAGCTTCATTTAGACCCTGGGAAGCAGTTT
CTCAATACCGGACAAGCAAGATATTTTGATCGAAGTTTTTTTGAAAGTGG
TACCCGAATCGAGAGCGATCTACTTGTGCAGTAAAGATGTAGCGCCGTTT
GTCGTTAGGCAAGATTTTAAAACTATAATGTCTTCATTGTGGGTACCCCT
CTCAAAAAACGATCAAAAATGGCGGATAAGGCTTGGTCTAGGTTTTATTA
AGGTCAGTGCCATCAACCCCAAAATGTTTTAATTTTAGGCCAATTCATTT
TCTCCGTCTGGGATGCAGATCGGACAAACAAAGCAGACGGTATCAAACAC
GTTAAAAAATCATCAAAACTAGCATGGCCGATGGATACGGAAAATTGTAA
ACGGAATTGCCAAGATTGTGGTGTACCCTACTTAAAAGAGATTGGTAAAA
AAGGTTTCACTACTGGTACAAAGTGCACCAAAAACCATCCATCGATGAAG
GTAACACCTTTTTGTATTTTTCCGTACACCCTTTTCTCAAAGACCCGTTA
GAATTTTTTCAGCCAACCATAACGAACGGAAGGTCTGTGATATTCCCATG
GTTTCATGGTTGGGGATTTAAATTCCATTTTGTTTTCAAGTCAGAAAATT
TAGTGGAGATAATTCATTATTTTCAGTGGGTACACAATCTGGAGTAGAAT
TTTCCACTGGGGACGATATTTTGGGCAATTTTTCCCGTGGGAAGGGGTCC
CAGTGGGTCTGTGAGAAGGGGATGTTTCGATCTAGAGTGATAGTCAAGTG
GTGAAAGGCGTCAGTCTCTCAAGCCAGAATTTCGCTCCTTGAATTCCCGC
TCCTTCTAATGTGCCATTCAATAGAGTAATGTATAGGGATAAAAATAGAG
AGTGCGAGAATGTGAAAAATATGTCGTTCTTTGTCGTTCTTTTTTTCGTT
TTTTTAATAGTTATTGTCGTTCTTTTTGATGGTCTGGAAACGTTAGATGA
ACAGTCTCACATTTCTCGAAAGCGTGCTTCGAGAATAGTAACTGCTATAG
GTTTGGTTTATCAACATGAAACATTAAACCTTTTAGGAGAGGGATAGTAA
ATCTAAGTCTTTGGGGTTTACAGATGTAGTCTACAGCCCACCAAGATACA
GTCATTATTTATTCACACCAATACCCTCATTAGGCTGGTGATCGATACAA
GGTCAAATTGGAGTGTGTACCAGATCAAGATACTATCAACACCGCTGATT
TCGAAGGTTTCAAAAAAGTCCATCAAGACGTTTTGGGAGAAGTTGATCGT
GACGTCACAGGTAAAATAAAACTGAAATATTTTCTCGAAAATACTATCAG
TTAATACTGAGAGAAAGCCAATCCTATGCTCCTAAAATAGCTCCCTCCCT
TATTAAATCTTGTAGTATATACCAGTCTAAATATGATTCCCCCGAGGCAG
CAGATCGGACAGAATTTACCTACCCTAAATTGACGTGAAAGTTGGTACGT
TTTGAAGAAGTGTCCAAAACAGGTCGGAAATGCAATATTAGCATATTTAT
AACATACGTACTTACTAATCATACATTATTTTAACCAAAGTAAATATTAA
TGAGAATATCAATTAGGGGGAATTGTAGGCTGCAAGCAACCTCTCTGATA
TGTTTTGATATTGGGGATGCTAATCGTGTATAAAATCCCCTTCCGAACAG
TAACCCAAATTTTGGGTAACCTGTTTCAACTTTCTTAAAATTGTTGAGAA
ACCCAATGATTATATTAACATCTAGTCATTCCAATTTTTAATTCAAATTT
AATGAAATTTAAATATATTTCATATAAGACTTACAAGTCAAGCTTATGAA
GAAACTCAAAAAAACAAAGACGGGGGTAACTCTCGGACGGGAATTTTATA
CACGAAACGCATCCCGTATATCAAACCATATCAGGGGGATACTTACAGTC
TAGGGAATCTAGGGAGCAGACTAGGAATAAATATAACAAATCTTTAAACA
GTTAAATCAAGAAAATTGTTCCTATAGGATCTGTATGGGAAGTCAAAGTT
ATTGTCGTAAAAGGTGAAAACCAAGGTTCCGAAATCCCAATCGGAACAAT
CATGTTCGAATCGGCTGAAATCGGATTCAACCGTCTTGGGACATTTGACG
AAATGATTGGCTGTAACAAATGTAACGCTATCTATCACAAGGACACTCGA
TATGGACCCAAGATCGGCGGGGACGACAGAAGTGTCCGTAAACCTACAAA
GATGTATGGCGACACGAAATATTACAAATCTTCTTGCAAAAAGTATTTTA
TTTCTGGCTCAAAAGATGAGACGAGTATCTCATTTGAGAGTGGCCCTCTA
ACTGAAGGAGTTACAAAGACCAAAACACAAATTTGGTAA Coding sequence (CDS) from alignment at sc0000148_pilon:755216..759804- >XLOC_038690 ID=XLOC_038690|Name=XLOC_038690|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2220bp|location=Sequence derived from alignment at sc0000148_pilon:755216..759804- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACCTTCGCCTATTGATTTTGGTGGGACTTGCGTTCACTCAAGATGA
ACCTTCGCCTATTGATTTTGGTGGGACTTGCGTTCACTCAAGGCAAGGAT
TTGTTTGACTTGGACGGTGTTGACGAACTTTTTCCTCATGATGAAAAAGT
AGAGGGCGGTGGGGATGAAATATTTCTCCACGATGAAAAAACGCCACAAC
CACAATGGCCGCCCATAAGCTCCAACAGATGCTCACAATCAACTAAACTT
AAAGTCATGTACGGAATCTTGCATTTTGAAACATCTCTCAAAAAGAAACC
GATGACATCATTTGAAATTGATATTGAATGGAACGCTCTGGAATTTCATC
TGACTGAAAATACGAAGAAACATGGAGGAGTTTATATAGCGTACACTTTC
GGTATGAAAAACGGACCCGGAGGATATTTTGGAATACAAATTCATGCTGA
TGGAGGCAAGGATTTGTTTGACTTGGACGGTGTTGACGAACTTTTTCCTC
ATGATGAAAAAGTAGAGGGCGGTGGGGATGAAATATTTCTCCACGATGAA
AAAACGCCACAACCACAATGGCCGCCCATAAGCTCCAACAGATGCTCACA
ATCAACTAAACTTAAAGTCATGTACGGAATCTTGCATTTTGAAACATCTC
TCAAAAAGAAACCGATGACATCATTTGAAATTGATATTGAATGGAACGCT
CTGGAATTTCATCTGACTGAAAATACGAAGAAACATGGAGGAGTTTATAT
AGCGTACACTTTCGGTATGAAAAACGGACCCGGAGGATATTTTGGAATAC
AAATTCATGCTGATGGAGGCCAATTCATTTTCTCCGTCTGGGATGCAGAT
CGGACAAACAAAGCAGACGGTATCAAACACGTTAAAAAATCATCAAAACT
AGCATGGCCGATGGATACGGAAAATTGTAAACGGAATTGCCAAGATTGTG
GTGTACCCTACTTAAAAGAGATTGGTAAAAAAGGTTTCACTACTGGTACA
AAGTGCACCAAAAACCATCCATCGATGAAGGCCAATTCATTTTCTCCGTC
TGGGATGCAGATCGGACAAACAAAGCAGACGGTATCAAACACGTTAAAAA
ATCATCAAAACTAGCATGGCCGATGGATACGGAAAATTGTAAACGGAATT
GCCAAGATTGTGGTGTACCCTACTTAAAAGAGATTGGTAAAAAAGGTTTC
ACTACTGGTACAAAGTGCACCAAAAACCATCCATCGATGAAGGCTGGTGA
TCGATACAAGGTCAAATTGGAGTGTGTACCAGATCAAGATACTATCAACA
CCGCTGATTTCGAAGGTTTCAAAAAAGTCCATCAAGACGTTTTGGGAGAA
GTTGATCGTGACGTCACAGGCTGGTGATCGATACAAGGTCAAATTGGAGT
GTGTACCAGATCAAGATACTATCAACACCGCTGATTTCGAAGGTTTCAAA
AAAGTCCATCAAGACGTTTTGGGAGAAGTTGATCGTGACGTCACAGGATC
TGTATGGGAAGTCAAAGTTATTGTCGTAAAAGGTGAAAACCAAGGTTCCG
AAATCCCAATCGGAACAATCATGTTCGAATCGGCTGAAATCGGATTCAAC
CGTCTTGGGACATTTGACGAAATGATTGGCTGTAACAAATGTAACGCTAT
CTATCACAAGGACACTCGATATGGACCCAAGATCGGCGGGGACGACAGAA
GTGTCCGTAAACCTACAAAGATGTATGGCGACACGAAATATTACAAATCT
TCTTGCAAAAAGTATTTTATTTCTGGCTCAAAAGATGAGACGAGTATCTC
ATTTGAGAGTGGCCCTCTAACTGAAGGAGTTACAAAGACCAAAACACAAA
TTTGGTAAGATCTGTATGGGAAGTCAAAGTTATTGTCGTAAAAGGTGAAA
ACCAAGGTTCCGAAATCCCAATCGGAACAATCATGTTCGAATCGGCTGAA
ATCGGATTCAACCGTCTTGGGACATTTGACGAAATGATTGGCTGTAACAA
ATGTAACGCTATCTATCACAAGGACACTCGATATGGACCCAAGATCGGCG
GGGACGACAGAAGTGTCCGTAAACCTACAAAGATGTATGGCGACACGAAA
TATTACAAATCTTCTTGCAAAAAGTATTTTATTTCTGGCTCAAAAGATGA
GACGAGTATCTCATTTGAGAGTGGCCCTCTAACTGAAGGAGTTACAAAGA
CCAAAACACAAATTTGGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000148_pilon | genome | sc0000148_pilon:755216..759804 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 751-1110:361 |
| Aaloc | 622-747:1207 |
| Aaloc | 412-621:2100 |
| Aaloc | 49-408:3256 |
| Aaloc | 1-45:4590 |
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