MSTRG.14616.1.p3 (mRNA) -

Overview
NameMSTRG.14616.1.p3
Unique NameMSTRG.14616.1.p3
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000123_pilon:214806..216185-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.14616.1.p3 ID=MSTRG.14616.1.p3|Name=MSTRG.14616.1.p3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1380bp|location=Sequence derived from alignment at sc0000123_pilon:214806..216185- (Clytia hemisphaerica_ch_hm2_pilon)
TAATCATCCGTCAAACATACAAGCCCGTCATTTGCTATTCAGACATAGAG
ACATGTTGACAGGATGAAAACTATCAAGGTAAAGAACTTTTGCTGAGTCT
TAAATATGAATTATTTTTTGATTCTTCATAGAAAAATCTCTAGGTTTGGT
TTTTGATAGCTTGATTATAATATAACATCTTGAATTTCTGTAAATCTTTT
GAAAAAACCATTGGGATATTTATATTGACTCAATAGACAATATTGGCTTT
GCATGAAAACTCAGATTTGACCCCCGAGAATTCCCCACAACGCTTTGTGC
GGAAAAAAATTTAACCGTGAACTTGAACTTTTTTCTGCGCAAAGCATTGT
GGGCAATATTTGGGGGTCAAATCTGAGTTTTCACGTTAAGCCGATATCGT
CTATTGGTTACTAGTCAGTTAATCTTTAACTTATCTGTTATCAATAAATA
AAAATAATCCAATTTCTGCTATTATTTTTCATTAGATGTCACTAGTTCTG
GTTCTATTTTGCTTGCTGTATCATGAATGTGGCACAAAAGAAGCAAAGAT
TCCATATCAAGCGCAATATGGCAAAGAGATGACAAACTTAGATCCTTTAC
AAAAGCAAAGTGACTATCATCATAAAAAGAACAAGGATGAAGCAATATTC
GTTGATGGAGTGAATGTAAAAGCCCTAAATATGTCAGAACTTCAGAAATT
CCTTGATAAGCTTGATAAAACACTTGCATTTGAGCTAGAATATCTGTCTT
TAAGGAATCATATCCAAGAAAAGTTGTAAAGTAGATATTACACTGGAAAA
CACCCTCATAATCAGAGAGTAAAGCGACAAACAAGAAGAATGGGTAGTGG
AGGCTATAAATGCAGTGCAGCTGGAGGCATGTTTCGCGGATCAGTGAGAT
CTGGACCAATGACTTCATCAGGGACGAGAACAACACAAAATTATGATCGT
ACTGGAAACTACGGAACAGCCTCTAAAGACTTTGACTCATTTGCTCCACA
AAATGTAAAACCTTTCTCAAAACCATACAAAGAAGGTACTTTAAGTGGGC
AAACAGGAAATATTGGTAACCATAGAATCACAATAAGAGATGGTAGCAAG
AAAGATACTCCTACTTTAGAAATTCGATCACCTCGCCCTGATGGATCAAC
ACATGTACGTCAATTCAGATATGAAGAAAACGAAGAAGGCCAAAATTGAT
TTTATTTCAAGATTTTCATTCTATAGTTGTCTTGTTTATAGGCGTGGCTA
CATTACATTAATAACGTAGTGGTCTAAAGAAACGACTATTCTTTTTTAGA
ATCAACCTTACAATCTAGTTTTTATATTTATAAAAACTAGATTGCTGACG
TGTGAAAAGGAATGTCGGCGTGAATGATCC

Coding sequence (CDS) from alignment at sc0000123_pilon:214806..216185-

>MSTRG.14616.1.p3 ID=MSTRG.14616.1.p3|Name=MSTRG.14616.1.p3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=618bp|location=Sequence derived from alignment at sc0000123_pilon:214806..216185- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCACTAGTTCTGGTTCTATTTTGCTTGCTGTATCATGAATGTGGCAC
AAAAGAAGCAAAGATTCCATATCAAGCGCAATATGGCAAAGAGATGACAA
ACTTAGATCCTTTACAAAAGCAAAGTGACTATCATCATAAAAAGAACAAG
GATGAAGCAATATTCGTTGATGGAGTGAATGTAAAAGCCCTAAATATGTC
AGAACTTCAGAAATTCCTTGATAAGCTTGATAAAACACTTGCATTTGAGC
TAGAATATCTGTCTTTAAGGAATCATATCCAAGAAAAGTTGTAAATGAAA
ACTATCAAGATGTCACTAGTTCTGGTTCTATTTTGCTTGCTGTATCATGA
ATGTGGCACAAAAGAAGCAAAGATTCCATATCAAGCGCAATATGGCAAAG
AGATGACAAACTTAGATCCTTTACAAAAGCAAAGTGACTATCATCATAAA
AAGAACAAGGATGAAGCAATATTCGTTGATGGAGTGAATGTAAAAGCCCT
AAATATGTCAGAACTTCAGAAATTCCTTGATAAGCTTGATAAAACACTTG
CATTTGAGCTAGAATATCTGTCTTTAAGGAATCATATCCAAGAAAAGTTG
TAAATGAAAACTATCAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.14616MSTRG.14616Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14616.1.p3.exon2MSTRG.14616.1.p3.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14616.1.p3.exon1MSTRG.14616.1.p3.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14616.1.p3MSTRG.14616.1.p3-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000123_pilongenomesc0000123_pilon:214806..216185 -