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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000234_pilon:496832..499704- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.19879.1.p1 ID=MSTRG.19879.1.p1|Name=MSTRG.19879.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2873bp|location=Sequence derived from alignment at sc0000234_pilon:496832..499704- (Clytia hemisphaerica_ch_hm2_pilon)
GTTCCAACAATGTCCTAATTTTCTCGACCCTGCAAACATAGCCAGCTCAT
ATTCGGGGCTATAAATAAAGGGACCAAAACATCACCAAGTCACTTTGGTT
TGCTGGTCTACACTTGAATAATTTTATACAGTGATCTATACTACAAAAAT
GAATTATTTTCTTGTTTTCATTTTACTTGCTGTCACCGTGATGACGTCAT
CAGTTTTCGGTCACGGTTACATGAGAAGTCCACCAGCCAGAAACAGCATG
TGGAGATTCGGCTTCAAGCAAAATGGAGCAAATTATAATGACAATCAACT
GTGGTGCGGAGGTATCCCTTTTGAATGAATTCCATCGTTATGCAATTTTT
TAGATAGATAGGGGTAATCTTACCCCTAGCGCACCCAAGCTGGGTTTCCA
GGCGGTTTTTTTCAGCGGTTAAAAGATTTTAGTTCAACCACCGTCACTTT
AAGGTATGAAAATAAATTTCCTAAGTTTTTTTTAGCAAATTTGTCACTTT
CCAGGGGCATTCACACAAGAAATGTTTTTTACTTGAAAGGTTCGTCAACC
CTACATTGAAATTTAATGGAATGGTCCAATGGTGTAAACGCCCAAAAGTA
AAGTACTGACCATTTGGTGACCCTTACTGTACTGATTATCAAACCAAAAA
AAACGATTTTCGTAAGCTTTGTTTTTCTTTTTCAATGTTATTGGGTTTCA
AACCACTTTCCACTCTAGGGTTGTTTCTCGATTTCATTGATGACATTAAT
TTCAATTCGAACACAATTTTTCAGGCCGTTCAACACAAAGGAGAAACAAG
GGTCGATGTGGCGTCTGTGGAGATCCTTTCGATGCAAAAATTCAACGTCA
CATGTAAACACCGTTTATCTTATGTTTTGTTATATCTTACTCCTTTTGAT
TGTATGAAGAAACACAGGGAATTCTTTTTCTATTCTAATCATATTTTAGG
AAACTTTAAATTACATTAGGGAACTTATTTTGGGGAATTTGGCGAGTTTA
GAGTTTAGATATTTGCCAAATATTTTACTCACTCGCCAAAATAAGTTCTC
TTCAGAATTGAATTATTTTGCATTTGCCAAATTGACACCTAAATTACTCA
AGATAACGCAAATTAAAGAGTAGTAAATTTTTCAAAATTATATCGGACTA
TCAAAAGTTACATGCATTGTTCAAAATAAGGTCCATGATTTAATGCTAGG
TGGCTTTAGGAATACCATAACAAAAATCGCAAAATTGATTTCTACATTAA
AAGAAAGAAGGAGTTTTATAAAATCGTCAATTCCCGACATTTACATTTTT
CAGGGACGGAGGTCGTTTTGGAAACCGGATCATTGGCAAAACCTACAAAA
GTGGAGAAGCTATTAAAATCAACGTCTTGTTGACTGCAAGCCATTTGGGA
TACTTCGAATTCCGTATCGGAGATTTCAGCAACAGTGATACTTCTGGTGA
CAAAGAGGGAAAGTTGAAAGGAGTTCTCTTGAAACAGGTGAACATTATTG
GCCACAGTCTTCGAATAGATCTTATCGGAGTTTTTGATTTTTCCAAAAAA
GTGATGCATTGAGGGATTGTTACAATAGAATTCCATCGAGGAATTCCTAG
AGAGATTTCTATTGTAATACTCCGGAAACAATCCAAAAATCCATCGCTGT
TTTAGAAAAATCAAAAACTTCGAAAAGATTGATTGTCTTCCAACATTACA
TCACTGACCCAATAATTGATTGGTTTAAAGTGACGTATGGAATGATTTTA
CATCTTTTACAACCAATAGACTGGTTTGATGTATGATGTAATGTTAGAAG
ATATTGCATTGGTGAATTTTATGATTCCACACCAATTGGTGCTTCTAACC
AAAGGCTGCTTGTCTTTATTGAAAGGGCGGCTTCGGTACCACCCGTTTTC
GCAATCAAGTTTAATTTACTTTTATCTTTCAATCTTTTTCTCAAATGTCT
TAAACACGGCTTGTCTGGTTTCTTGAGAGAATCTTTACTGGAATTCGATT
ACTGACTCTCTATTGTTCAAGTTAAAGATAATATTGGTAATAACCTCCAA
AGAGGCTCTGGATTTGAAACTTTTTGGAAGGAAGTTAAGCCACTTACTTT
AGGCGTACAAAACTTTCGCGTGGCCGAAAAATCGCTAAATTTACGACATA
TACTTTCGCGAGTTGGAGGAAATAATTTTTTCCGCGAGCATAGACTTTTG
CGAATCGTTTGATGAAAATGAGATTTTTCGAATGAAAATTGCCATCAAAG
TGAAAAATATTGCTTAAATCCGATAAAGACGGTTGCACTTCGACTTTAAA
AAGGCACTAAAGGATAGAAAATGTCAAAAAATTGATAACTATTACAATTT
CGTGGTTGTATAGATTTCCAATTTTTTTTGAGAATTTTTTTCACGAGCAT
AATTCTTCGCGAAAGTTTCTGCTCGCGAAAGTTTGTACGCCTAATTGCCG
GGGGATTGGAAATTGTACTTTTAACAAGCTGGGGCCGTTTATTTGGAACC
TAAGAGTAACCGTGATCGTTTCATCATACAGGTTAGTGGATCAACGAAAT
ATCACATTCGCTCAGCTGGCGCAAGATCTCACACAATCCACTTGCAATTA
CCTACCAACTTAACCTGTGAACGTTGTGTAATTCAATGGTGGTACAAAAC
TGGCAACTCTTGGGGATGTGATGCTGAAGGCTGTGGTTTGGGCCATGGAT
TTCAAGAAACGTTCGTCAACTGTGCTGATGTTCGCGTTGAATGAGAAGCC
GTTCATTCGGTCGTCAAAATTTTCGTTTGTTATTGTGATAATTTTGGTGA
TAGTTTTCAAAATAAAACATCAACACATAATTCTTTAAGAAAAAGTGAAT
ATCTTGAATATATTGAATGCTAT Coding sequence (CDS) from alignment at sc0000234_pilon:496832..499704- >MSTRG.19879.1.p1 ID=MSTRG.19879.1.p1|Name=MSTRG.19879.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2556bp|location=Sequence derived from alignment at sc0000234_pilon:496832..499704- (Clytia hemisphaerica_ch_hm2_pilon)
GTTAGTGGATCAACGAAATATCACATTCGCTCAGCTGGCGCAAGATCTCA
CACAATCCACTTGCAATTACCTACCAACTTAACCTGTGAACGTTGTGTAA
TTCAATGGTGGTACAAAACTGGCAACTCTTGGGGATGTGATGCTGAAGGC
TGTGGTTTGGGCCATGGATTTCAAGAAACGTTCGTCAACTGTGCTGATGT
TCGCGTTGAATGAGGACGGAGGTCGTTTTGGAAACCGGATCATTGGCAAA
ACCTACAAAAGTGGAGAAGCTATTAAAATCAACGTCTTGTTGACTGCAAG
CCATTTGGGATACTTCGAATTCCGTATCGGAGATTTCAGCAACAGTGATA
CTTCTGGTGACAAAGAGGGAAAGTTGAAAGGAGTTCTCTTGAAACAGGCC
GTTCAACACAAAGGAGAAACAAGGGTCGATGTGGCGTCTGTGGAGATCCT
TTCGATGCAAAAATTCAACGTCACATATGAATTATTTTCTTGTTTTCATT
TTACTTGCTGTCACCGTGATGACGTCATCAGTTTTCGGTCACGGTTACAT
GAGAAGTCCACCAGCCAGAAACAGCATGTGGAGATTCGGCTTCAAGCAAA
ATGGAGCAAATTATAATGACAATCAACTGTGGTGCGGAGGTTAGTGGATC
AACGAAATATCACATTCGCTCAGCTGGCGCAAGATCTCACACAATCCACT
TGCAATTACCTACCAACTTAACCTGTGAACGTTGTGTAATTCAATGGTGG
TACAAAACTGGCAACTCTTGGGGATGTGATGCTGAAGGCTGTGGTTTGGG
CCATGGATTTCAAGAAACGTTCGTCAACTGTGCTGATGTTCGCGTTGAAT
GAGGACGGAGGTCGTTTTGGAAACCGGATCATTGGCAAAACCTACAAAAG
TGGAGAAGCTATTAAAATCAACGTCTTGTTGACTGCAAGCCATTTGGGAT
ACTTCGAATTCCGTATCGGAGATTTCAGCAACAGTGATACTTCTGGTGAC
AAAGAGGGAAAGTTGAAAGGAGTTCTCTTGAAACAGGCCGTTCAACACAA
AGGAGAAACAAGGGTCGATGTGGCGTCTGTGGAGATCCTTTCGATGCAAA
AATTCAACGTCACATATGAATTATTTTCTTGTTTTCATTTTACTTGCTGT
CACCGTGATGACGTCATCAGTTTTCGGTCACGGTTACATGAGAAGTCCAC
CAGCCAGAAACAGCATGTGGAGATTCGGCTTCAAGCAAAATGGAGCAAAT
TATAATGACAATCAACTGTGGTGCGGAGGTTAGTGGATCAACGAAATATC
ACATTCGCTCAGCTGGCGCAAGATCTCACACAATCCACTTGCAATTACCT
ACCAACTTAACCTGTGAACGTTGTGTAATTCAATGGTGGTACAAAACTGG
CAACTCTTGGGGATGTGATGCTGAAGGCTGTGGTTTGGGCCATGGATTTC
AAGAAACGTTCGTCAACTGTGCTGATGTTCGCGTTGAATGAGGACGGAGG
TCGTTTTGGAAACCGGATCATTGGCAAAACCTACAAAAGTGGAGAAGCTA
TTAAAATCAACGTCTTGTTGACTGCAAGCCATTTGGGATACTTCGAATTC
CGTATCGGAGATTTCAGCAACAGTGATACTTCTGGTGACAAAGAGGGAAA
GTTGAAAGGAGTTCTCTTGAAACAGGCCGTTCAACACAAAGGAGAAACAA
GGGTCGATGTGGCGTCTGTGGAGATCCTTTCGATGCAAAAATTCAACGTC
ACATATGAATTATTTTCTTGTTTTCATTTTACTTGCTGTCACCGTGATGA
CGTCATCAGTTTTCGGTCACGGTTACATGAGAAGTCCACCAGCCAGAAAC
AGCATGTGGAGATTCGGCTTCAAGCAAAATGGAGCAAATTATAATGACAA
TCAACTGTGGTGCGGAGGTTAGTGGATCAACGAAATATCACATTCGCTCA
GCTGGCGCAAGATCTCACACAATCCACTTGCAATTACCTACCAACTTAAC
CTGTGAACGTTGTGTAATTCAATGGTGGTACAAAACTGGCAACTCTTGGG
GATGTGATGCTGAAGGCTGTGGTTTGGGCCATGGATTTCAAGAAACGTTC
GTCAACTGTGCTGATGTTCGCGTTGAATGAGGACGGAGGTCGTTTTGGAA
ACCGGATCATTGGCAAAACCTACAAAAGTGGAGAAGCTATTAAAATCAAC
GTCTTGTTGACTGCAAGCCATTTGGGATACTTCGAATTCCGTATCGGAGA
TTTCAGCAACAGTGATACTTCTGGTGACAAAGAGGGAAAGTTGAAAGGAG
TTCTCTTGAAACAGGCCGTTCAACACAAAGGAGAAACAAGGGTCGATGTG
GCGTCTGTGGAGATCCTTTCGATGCAAAAATTCAACGTCACATATGAATT
ATTTTCTTGTTTTCATTTTACTTGCTGTCACCGTGATGACGTCATCAGTT
TTCGGTCACGGTTACATGAGAAGTCCACCAGCCAGAAACAGCATGTGGAG
ATTCGGCTTCAAGCAAAATGGAGCAAATTATAATGACAATCAACTGTGGT
GCGGAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000234_pilon | genome | sc0000234_pilon:496832..499704 - |
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