MSTRG.12510.1.p1 (mRNA) -

Overview
NameMSTRG.12510.1.p1
Unique NameMSTRG.12510.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000095_pilon:27713..30470-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.12510.1.p1 ID=MSTRG.12510.1.p1|Name=MSTRG.12510.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2758bp|location=Sequence derived from alignment at sc0000095_pilon:27713..30470- (Clytia hemisphaerica_ch_hm2_pilon)
TGGATGGAGAAACCCAACCAAAACACCAGACTTTGACAAACACAAACAAA
TCATTTCATTATTTCAACATGTTTGCAGTAAAGGAAAAGGTGAACCTCAT
TTTTAAACTTAGAATAAACATTTTTCATATTGAATTTTGGTTTCATATGG
TTATTTTTGTGTGTTATTATTACACTCTTTTAAAGGCATATCACTAACAG
TGTATTGCATTATAAACTATAAATTTGATCGAAGAGGACAAGAACACAGT
GTTGCAAGCAATAACGAAAGAAAAAGGCTTTCCTTACCGAGTGACAGAGG
ATTTGACCAAAAATGAAAGACAAATAATCAAAGAATGGTGTAAGGAAGCC
GAAAAAATGAATGCTAAAATCAAGGGAGACAACACAAAATGGAAAGTCCG
GGGGAGCCCGCGAAAAAAACTTTATTTCAAAAAGATCATTGTAAAAAGTA
CGAGCGGTTTATAGAGGCCCATGTGTCTTCACGGTGGCCTGCAAACCTGT
AAAGCTTTATTATTATTATTATTATTATTATTGTTATTATTGATGGAAAA
TCAGGTAAAATGGTAGAATGTTGAACACACTACACTAGTTTCCAGTTAAA
TGAGTTTTTTTATATTATTTCAAGGTCAACGGGAGTCATTTGAGCAACAA
GCGGAAAAGAGAAATGAAGGATGTTTCCCCAGAAGAATTCTTGCCAACAA
ACAAAGAGCTGGATAAACTTGAGAAGGATTTTATAGTACTTGCCGCAAGG
GTTATTGTAAAGCAGATACCATCAATGCAAGAAGTATTCAAGGATGCTGT
TGTTCATCACATTAAACATCAATACTCGGAAGAAATGGAAACAAAATCTG
AACAGGTTATAAACATTATAACAATGATATTATTTGGATGAGGTTATTAT
AAGACTTCTATCATCTAAATTCTGATATAAAATTTTGGTTGGACCAAAGT
AAAACTTTTTAAAGAATTTGCTTTTAAAACCTAACAAAAGCAGGAAATGT
CAATGTCATGAGCAGAATTTAATTGTAGCTTTGTGTTTAATTTTAAGGTA
CCATTAGGAGCTTATGCCCTTAATGAGAATAAGCACGAAGACATGATCGA
AATCATTGAACGCATACAAGAAAGGTACAATGCACAATTATTTTTTTTAA
TAGAATTAAATAGCAAAAACTTCAGGATTCCTTTTTTGCAAATCAAACAT
CAAATCTGTTGAGAGTGGACCTAAAACTTATAAAAATACTTACTGTGAGA
AAAGAAATTACAGGGTACTTGTGGTAACAATCTGATAAAAAAATTTCATT
TGGATTTAATTTTGCACATTTTTCAAAAGATTTCTTGTTGATATAAAAAT
TTGCAAAAGCGCCAAATTAAATCTGTATCTTTTAACTTGTACATTTTTTA
ATTACCATACTGACTACAGTTTTATACAGGTGGTTATCCTTGATCAATAT
TTTAGCTTTTATAATGCTTTAATCCCCTTATATTTTATTATAAAGATATG
TTCCAAAAGACGAATCTGGAGACGGTGTAACTTTCTTTGGTGGTGACCAG
TTGACAGAAGAAAGGTCAAGATCTGCTCAGAATGCCCGTGCGGACGGAAG
AACTGTAGAAGAACGACTCCAGGGACTGTTGCCTAAATTTGAAGACTGGC
ATGCTATCAGGACTGCTTATGATGTATGTCTGTTAAAACTTTTTTTAAAT
CTTTGAAAACCTTTTTTTTTACAAAACATGGGAGATGTACATCCTAATAA
AATTGTGGGAAGATGTATTTACAGCTTGGAGTTCTGATTTTTTGTAACAA
TTGAAGGCTTTTAGTTTTTAAAAAAAACCAAGCCCTTAAGAAAACACATC
TTTGAAGAATTTGACTTTACTATAATTTTAATTTTGATTCATTTCTACCT
ATACTCAGTCTGCGTTGAAAGTATTCTACAGCAAAGAGGCAACTGGTGAT
GCTGGAACCTACCTGACAAACGCGATAAAAACAGGCAACAAAAATGCTCT
GAGGAAAGTAGAGGACAAGTTTCAAGAGGTCCGGGAGTTTTTTGACATTG
AAACGAAGGCATTACTGTTGTCTGGATTTCTGAAACAAGAAGGTATGTTT
TAAGAAATGGTTTATTAGCTTGAAATAAGTTTTTGAATTGTGCTGATTTT
AAAGCTTGCCAGGAAGTGAGAACTCTCCCCTCAGAGTGTTGATTTCCCTG
CATCATTTTATATGTACTGTTTTGAGAAGAAACAAAAAACAGTTTTACTT
CTAATAAAGGGACTAACTATTCTCATTTCTTTGAAAAAGGTTTTGAAAAC
ATTGAGGACTACCATCCACCACAGGAACTATTAACAAAAGATGTCAAAAC
ACGAAGGAGATGGCTTCATGGAAGAATTCGTTTATTTTTGAAAGATAACA
TAATGGTATCATTGCAATCTTTAACCAAAATGCTCCCAGAACAACGAACT
CACAAATGCCGTGATGCTACCTGTAACAATGTAAATACAACCCATTTTTT
ATTACTTTCATCCTGTTGCTTGGTTACATATATTATGCTTTTAAAAAGCC
TTCAACCGTCCCTTAAATCTTCCATAAATCAAGACTATAAGAAAAATCAG
ATGTAAAGCCCATTCAAAAAATCAGACCTGTATTTTTCCTTTTTCCATTT
TAATTTTTTTCTTGACAACAGAGATTCTTCTTCCTACCTGCTAAGAACAT
GCACGAGCAACGAGAGCATGGGCTTGAACCTTTGACTTCATTACCATCCT
CAGAGAAA

Coding sequence (CDS) from alignment at sc0000095_pilon:27713..30470-

>MSTRG.12510.1.p1 ID=MSTRG.12510.1.p1|Name=MSTRG.12510.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=6783bp|location=Sequence derived from alignment at sc0000095_pilon:27713..30470- (Clytia hemisphaerica_ch_hm2_pilon)
AGATTCTTCTTCCTACCTGCTAAGAACATGCACGAGCAACGAGAGCATGG
GCTTGAACCTTTGACTTCATTACCATCCTCAGAGAAAGTTTTGAAAACAT
TGAGGACTACCATCCACCACAGGAACTATTAACAAAAGATGTCAAAACAC
GAAGGAGATGGCTTCATGGAAGAATTCGTTTATTTTTGAAAGATAACATA
ATGGTATCATTGCAATCTTTAACCAAAATGCTCCCAGAACAACGAACTCA
CAAATGCCGTGATGCTACCTGTAACAATTCTGCGTTGAAAGTATTCTACA
GCAAAGAGGCAACTGGTGATGCTGGAACCTACCTGACAAACGCGATAAAA
ACAGGCAACAAAAATGCTCTGAGGAAAGTAGAGGACAAGTTTCAAGAGGT
CCGGGAGTTTTTTGACATTGAAACGAAGGCATTACTGTTGTCTGGATTTC
TGAAACAAGAAGATATGTTCCAAAAGACGAATCTGGAGACGGTGTAACTT
TCTTTGGTGGTGACCAGTTGACAGAAGAAAGGTCAAGATCTGCTCAGAAT
GCCCGTGCGGACGGAAGAACTGTAGAAGAACGACTCCAGGGACTGTTGCC
TAAATTTGAAGACTGGCATGCTATCAGGACTGCTTATGATGTACCATTAG
GAGCTTATGCCCTTAATGAGAATAAGCACGAAGACATGATCGAAATCATT
GAACGCATACAAGAAAGGTCAACGGGAGTCATTTGAGCAACAAGCGGAAA
AGAGAAATGAAGGATGTTTCCCCAGAAGAATTCTTGCCAACAAACAAAGA
GCTGGATAAACTTGAGAAGGATTTTATAGTACTTGCCGCAAGGGTTATTG
TAAAGCAGATACCATCAATGCAAGAAGTATTCAAGGATGCTGTTGTTCAT
CACATTAAACATCAATACTCGGAAGAAATGGAAACAAAATCTGAACAGAT
GTTTGCAGTAAAGGAAAAGAGATTCTTCTTCCTACCTGCTAAGAACATGC
ACGAGCAACGAGAGCATGGGCTTGAACCTTTGACTTCATTACCATCCTCA
GAGAAAGTTTTGAAAACATTGAGGACTACCATCCACCACAGGAACTATTA
ACAAAAGATGTCAAAACACGAAGGAGATGGCTTCATGGAAGAATTCGTTT
ATTTTTGAAAGATAACATAATGGTATCATTGCAATCTTTAACCAAAATGC
TCCCAGAACAACGAACTCACAAATGCCGTGATGCTACCTGTAACAATTCT
GCGTTGAAAGTATTCTACAGCAAAGAGGCAACTGGTGATGCTGGAACCTA
CCTGACAAACGCGATAAAAACAGGCAACAAAAATGCTCTGAGGAAAGTAG
AGGACAAGTTTCAAGAGGTCCGGGAGTTTTTTGACATTGAAACGAAGGCA
TTACTGTTGTCTGGATTTCTGAAACAAGAAGATATGTTCCAAAAGACGAA
TCTGGAGACGGTGTAACTTTCTTTGGTGGTGACCAGTTGACAGAAGAAAG
GTCAAGATCTGCTCAGAATGCCCGTGCGGACGGAAGAACTGTAGAAGAAC
GACTCCAGGGACTGTTGCCTAAATTTGAAGACTGGCATGCTATCAGGACT
GCTTATGATGTACCATTAGGAGCTTATGCCCTTAATGAGAATAAGCACGA
AGACATGATCGAAATCATTGAACGCATACAAGAAAGGTCAACGGGAGTCA
TTTGAGCAACAAGCGGAAAAGAGAAATGAAGGATGTTTCCCCAGAAGAAT
TCTTGCCAACAAACAAAGAGCTGGATAAACTTGAGAAGGATTTTATAGTA
CTTGCCGCAAGGGTTATTGTAAAGCAGATACCATCAATGCAAGAAGTATT
CAAGGATGCTGTTGTTCATCACATTAAACATCAATACTCGGAAGAAATGG
AAACAAAATCTGAACAGATGTTTGCAGTAAAGGAAAAGAGATTCTTCTTC
CTACCTGCTAAGAACATGCACGAGCAACGAGAGCATGGGCTTGAACCTTT
GACTTCATTACCATCCTCAGAGAAAGTTTTGAAAACATTGAGGACTACCA
TCCACCACAGGAACTATTAACAAAAGATGTCAAAACACGAAGGAGATGGC
TTCATGGAAGAATTCGTTTATTTTTGAAAGATAACATAATGGTATCATTG
CAATCTTTAACCAAAATGCTCCCAGAACAACGAACTCACAAATGCCGTGA
TGCTACCTGTAACAATTCTGCGTTGAAAGTATTCTACAGCAAAGAGGCAA
CTGGTGATGCTGGAACCTACCTGACAAACGCGATAAAAACAGGCAACAAA
AATGCTCTGAGGAAAGTAGAGGACAAGTTTCAAGAGGTCCGGGAGTTTTT
TGACATTGAAACGAAGGCATTACTGTTGTCTGGATTTCTGAAACAAGAAG
ATATGTTCCAAAAGACGAATCTGGAGACGGTGTAACTTTCTTTGGTGGTG
ACCAGTTGACAGAAGAAAGGTCAAGATCTGCTCAGAATGCCCGTGCGGAC
GGAAGAACTGTAGAAGAACGACTCCAGGGACTGTTGCCTAAATTTGAAGA
CTGGCATGCTATCAGGACTGCTTATGATGTACCATTAGGAGCTTATGCCC
TTAATGAGAATAAGCACGAAGACATGATCGAAATCATTGAACGCATACAA
GAAAGGTCAACGGGAGTCATTTGAGCAACAAGCGGAAAAGAGAAATGAAG
GATGTTTCCCCAGAAGAATTCTTGCCAACAAACAAAGAGCTGGATAAACT
TGAGAAGGATTTTATAGTACTTGCCGCAAGGGTTATTGTAAAGCAGATAC
CATCAATGCAAGAAGTATTCAAGGATGCTGTTGTTCATCACATTAAACAT
CAATACTCGGAAGAAATGGAAACAAAATCTGAACAGATGTTTGCAGTAAA
GGAAAAGAGATTCTTCTTCCTACCTGCTAAGAACATGCACGAGCAACGAG
AGCATGGGCTTGAACCTTTGACTTCATTACCATCCTCAGAGAAAGTTTTG
AAAACATTGAGGACTACCATCCACCACAGGAACTATTAACAAAAGATGTC
AAAACACGAAGGAGATGGCTTCATGGAAGAATTCGTTTATTTTTGAAAGA
TAACATAATGGTATCATTGCAATCTTTAACCAAAATGCTCCCAGAACAAC
GAACTCACAAATGCCGTGATGCTACCTGTAACAATTCTGCGTTGAAAGTA
TTCTACAGCAAAGAGGCAACTGGTGATGCTGGAACCTACCTGACAAACGC
GATAAAAACAGGCAACAAAAATGCTCTGAGGAAAGTAGAGGACAAGTTTC
AAGAGGTCCGGGAGTTTTTTGACATTGAAACGAAGGCATTACTGTTGTCT
GGATTTCTGAAACAAGAAGATATGTTCCAAAAGACGAATCTGGAGACGGT
GTAACTTTCTTTGGTGGTGACCAGTTGACAGAAGAAAGGTCAAGATCTGC
TCAGAATGCCCGTGCGGACGGAAGAACTGTAGAAGAACGACTCCAGGGAC
TGTTGCCTAAATTTGAAGACTGGCATGCTATCAGGACTGCTTATGATGTA
CCATTAGGAGCTTATGCCCTTAATGAGAATAAGCACGAAGACATGATCGA
AATCATTGAACGCATACAAGAAAGGTCAACGGGAGTCATTTGAGCAACAA
GCGGAAAAGAGAAATGAAGGATGTTTCCCCAGAAGAATTCTTGCCAACAA
ACAAAGAGCTGGATAAACTTGAGAAGGATTTTATAGTACTTGCCGCAAGG
GTTATTGTAAAGCAGATACCATCAATGCAAGAAGTATTCAAGGATGCTGT
TGTTCATCACATTAAACATCAATACTCGGAAGAAATGGAAACAAAATCTG
AACAGATGTTTGCAGTAAAGGAAAAGAGATTCTTCTTCCTACCTGCTAAG
AACATGCACGAGCAACGAGAGCATGGGCTTGAACCTTTGACTTCATTACC
ATCCTCAGAGAAAGTTTTGAAAACATTGAGGACTACCATCCACCACAGGA
ACTATTAACAAAAGATGTCAAAACACGAAGGAGATGGCTTCATGGAAGAA
TTCGTTTATTTTTGAAAGATAACATAATGGTATCATTGCAATCTTTAACC
AAAATGCTCCCAGAACAACGAACTCACAAATGCCGTGATGCTACCTGTAA
CAATTCTGCGTTGAAAGTATTCTACAGCAAAGAGGCAACTGGTGATGCTG
GAACCTACCTGACAAACGCGATAAAAACAGGCAACAAAAATGCTCTGAGG
AAAGTAGAGGACAAGTTTCAAGAGGTCCGGGAGTTTTTTGACATTGAAAC
GAAGGCATTACTGTTGTCTGGATTTCTGAAACAAGAAGATATGTTCCAAA
AGACGAATCTGGAGACGGTGTAACTTTCTTTGGTGGTGACCAGTTGACAG
AAGAAAGGTCAAGATCTGCTCAGAATGCCCGTGCGGACGGAAGAACTGTA
GAAGAACGACTCCAGGGACTGTTGCCTAAATTTGAAGACTGGCATGCTAT
CAGGACTGCTTATGATGTACCATTAGGAGCTTATGCCCTTAATGAGAATA
AGCACGAAGACATGATCGAAATCATTGAACGCATACAAGAAAGGTCAACG
GGAGTCATTTGAGCAACAAGCGGAAAAGAGAAATGAAGGATGTTTCCCCA
GAAGAATTCTTGCCAACAAACAAAGAGCTGGATAAACTTGAGAAGGATTT
TATAGTACTTGCCGCAAGGGTTATTGTAAAGCAGATACCATCAATGCAAG
AAGTATTCAAGGATGCTGTTGTTCATCACATTAAACATCAATACTCGGAA
GAAATGGAAACAAAATCTGAACAGATGTTTGCAGTAAAGGAAAAGAGATT
CTTCTTCCTACCTGCTAAGAACATGCACGAGCAACGAGAGCATGGGCTTG
AACCTTTGACTTCATTACCATCCTCAGAGAAAGTTTTGAAAACATTGAGG
ACTACCATCCACCACAGGAACTATTAACAAAAGATGTCAAAACACGAAGG
AGATGGCTTCATGGAAGAATTCGTTTATTTTTGAAAGATAACATAATGGT
ATCATTGCAATCTTTAACCAAAATGCTCCCAGAACAACGAACTCACAAAT
GCCGTGATGCTACCTGTAACAATTCTGCGTTGAAAGTATTCTACAGCAAA
GAGGCAACTGGTGATGCTGGAACCTACCTGACAAACGCGATAAAAACAGG
CAACAAAAATGCTCTGAGGAAAGTAGAGGACAAGTTTCAAGAGGTCCGGG
AGTTTTTTGACATTGAAACGAAGGCATTACTGTTGTCTGGATTTCTGAAA
CAAGAAGATATGTTCCAAAAGACGAATCTGGAGACGGTGTAACTTTCTTT
GGTGGTGACCAGTTGACAGAAGAAAGGTCAAGATCTGCTCAGAATGCCCG
TGCGGACGGAAGAACTGTAGAAGAACGACTCCAGGGACTGTTGCCTAAAT
TTGAAGACTGGCATGCTATCAGGACTGCTTATGATGTACCATTAGGAGCT
TATGCCCTTAATGAGAATAAGCACGAAGACATGATCGAAATCATTGAACG
CATACAAGAAAGGTCAACGGGAGTCATTTGAGCAACAAGCGGAAAAGAGA
AATGAAGGATGTTTCCCCAGAAGAATTCTTGCCAACAAACAAAGAGCTGG
ATAAACTTGAGAAGGATTTTATAGTACTTGCCGCAAGGGTTATTGTAAAG
CAGATACCATCAATGCAAGAAGTATTCAAGGATGCTGTTGTTCATCACAT
TAAACATCAATACTCGGAAGAAATGGAAACAAAATCTGAACAGATGTTTG
CAGTAAAGGAAAAGAGATTCTTCTTCCTACCTGCTAAGAACATGCACGAG
CAACGAGAGCATGGGCTTGAACCTTTGACTTCATTACCATCCTCAGAGAA
AGTTTTGAAAACATTGAGGACTACCATCCACCACAGGAACTATTAACAAA
AGATGTCAAAACACGAAGGAGATGGCTTCATGGAAGAATTCGTTTATTTT
TGAAAGATAACATAATGGTATCATTGCAATCTTTAACCAAAATGCTCCCA
GAACAACGAACTCACAAATGCCGTGATGCTACCTGTAACAATTCTGCGTT
GAAAGTATTCTACAGCAAAGAGGCAACTGGTGATGCTGGAACCTACCTGA
CAAACGCGATAAAAACAGGCAACAAAAATGCTCTGAGGAAAGTAGAGGAC
AAGTTTCAAGAGGTCCGGGAGTTTTTTGACATTGAAACGAAGGCATTACT
GTTGTCTGGATTTCTGAAACAAGAAGATATGTTCCAAAAGACGAATCTGG
AGACGGTGTAACTTTCTTTGGTGGTGACCAGTTGACAGAAGAAAGGTCAA
GATCTGCTCAGAATGCCCGTGCGGACGGAAGAACTGTAGAAGAACGACTC
CAGGGACTGTTGCCTAAATTTGAAGACTGGCATGCTATCAGGACTGCTTA
TGATGTACCATTAGGAGCTTATGCCCTTAATGAGAATAAGCACGAAGACA
TGATCGAAATCATTGAACGCATACAAGAAAGGTCAACGGGAGTCATTTGA
GCAACAAGCGGAAAAGAGAAATGAAGGATGTTTCCCCAGAAGAATTCTTG
CCAACAAACAAAGAGCTGGATAAACTTGAGAAGGATTTTATAGTACTTGC
CGCAAGGGTTATTGTAAAGCAGATACCATCAATGCAAGAAGTATTCAAGG
ATGCTGTTGTTCATCACATTAAACATCAATACTCGGAAGAAATGGAAACA
AAATCTGAACAGATGTTTGCAGTAAAGGAAAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.12510MSTRG.12510Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12510.1.p1MSTRG.12510.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.12510.1.p1.exon7MSTRG.12510.1.p1.exon7Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.12510.1.p1.exon6MSTRG.12510.1.p1.exon6Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.12510.1.p1.exon5MSTRG.12510.1.p1.exon5Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.12510.1.p1.exon4MSTRG.12510.1.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.12510.1.p1.exon3MSTRG.12510.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.12510.1.p1.exon2MSTRG.12510.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.12510.1.p1.exon1MSTRG.12510.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000095_pilongenomesc0000095_pilon:27713..30470 -