MSTRG.14825.1.p1 (mRNA) -

Overview
NameMSTRG.14825.1.p1
Unique NameMSTRG.14825.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000126_pilon:162529..165907-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.14825.1.p1 ID=MSTRG.14825.1.p1|Name=MSTRG.14825.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3379bp|location=Sequence derived from alignment at sc0000126_pilon:162529..165907- (Clytia hemisphaerica_ch_hm2_pilon)
TTCTCTTTTTTCATTCTTTTCAGATAGAAAAGTATTACCATAAAAACATA
ATTATTTAAATTTGTACTGCTGGTCAGTCAAAAGATTTGCAATGAAGCTG
GTTTTTGTTGTAGTTTTTGGTTTGGTTTTCACTATTTGCCATGCTATTGA
GTTCAAACACCACAATTACAAGAATATGTTGAAATATATGAATGACATTC
ACAAAAAATGTCCAAATATAACTCGCCTTTATGACCTTGATAACAAGACT
GTGCAAGGTCGAAGGTTGACTGTTATGGAGATAACAGAAAACCCTGGTAA
ATATGTCCCTTTGAAGCCTAATTTCAAATATATTGGGAATATGCATGGGA
ATGAAGTTTTAGGACGTGAAACTTTGCTGTATCTTTTGGATTATTTATGT
ACAAGCTATTTGGCTAAGAATCCTGAAACAGAACATTTACTTCAAACAAC
TCGTATCCATATTTTGCCATCTATGAATCCCGATGGTTATGAAAAAGCTG
TTGAAGGTGATTGTTCAAGTGTGCGTGGTAGGGCAAATGGCCATGGCATA
GATTTGAACAGGTAATTCTTCAGTAGTGGCCGCGTGCTTATCATATAAAT
TAAAATGCCAATCAAATCAATCCAATTTAATACAGTATATCAATATCAAT
AGTATATTTAAAAATATATTTTGTTTTTAAGTAGAAAAGTTAATTTTTGA
TCTTCTATCTGGCCTGGTTTGGCTTAACATCCATATTTCTTTAAATGTCT
TTTTTTTATTCTTTCTTTTTTTGCAAATATCATTAAACATGATATCACTT
TTTTACATACAGAAATTTTCCAGATCAGTTCAAGAAGATTCGTAATCAAC
AGCCAGAAACTGAAGCCATTATAAAATGGTTAGATCAATATCCTTTTGTA
CTATCAGCCAACCTTCATGGAGGAAGTTTGGTTGCCAATTACCCTTTCGA
TGATGATGAGAAGATGAAAGAAATGTATGCAGCATCACCAGATGATGATG
TTTTTGTCCATATTGCAAAGAACTACTCTTACAATCACCCAACCATGCAT
TTCGGAAAGACAAAATGTGGGGATCACTTCAAAGATGGTACACCACTCCT
TCATCATCTTCCTTTCTAGACCAAGATCGCCAAAATATTTTACTTCTTGC
AAATAACCTTTAAAAGCATTTCAACTTTCTTCAGCATTTTAAACAGAGCT
TTTGTCTAAAATTCACAAACAAATAGTCCTAAGTTTTATTCATATTTACA
TTTGATAACAATAACCTAGGTAACAATACTTGAAATTTTTGTCTGTTGGT
CACTGTAGTAATAAGTCATTTGATATTTTTTTGCTGTTAACAGGTATTAC
GAACGGTGCTAAATGGTACAATGTAGCAGGTGGCATGCAAGACTACAATT
ACTTACATGGAAATGCATTTGAAATTACTGTTGAGATGGACTGTTGTAAA
TTTCCTCATGGACAACACCTCAAAAAACAATGGGAAGACCACAAGCGCTC
TCTCATTGATTATATCAAACTCTCACATTTGGGGTTGAAAGGAACCGTCA
AGTAAACTTTTAATATAATTTATGTATGAAAAATAGACAATTTGACTGTG
TTTTTGCTTTAGATTATTCTTTCCTTAGTTGCTAGAACAACATGAGCTAG
CTGTAATTAAACATAATGCCCTTTTCATTTTCAGAGACACTTCTGGAAAT
GGTATTACTGGTGCAAAGATTGACGTCAGCTATCCTGATGGTAAAACACG
GATACCCATCCATTCCAGAGATGGTGGTGATTATTACCGATTGCTTTTGA
AGGGAAATTACAGTGTTACAGTAAGTGTTCATGGCAAAACCCTGACTACA
CAAGTTCATGTTGATGGTCTGCCAACGAAGATTGTAGATTTCATTGTCGG
TCCTGATTCCATTACCGCTCAATCCGTACATGCAGCTGCACCAGCAGTAT
CTGGAAATGTTGCAACTGTAAATGTTCCAGCTGTAAATGTTATGGCTGCT
GCAAATCCTGTTGATGATATCAAGAAAGAAGTAAAAGAACACCAAGGAAA
ACCTGTGAAGTCCTCCAGATCTGATAATGTGGCAGCAGCAGCTGTCATTG
TCACCATTGGTGTTATCGTTTGCGTTCTGGCTGGTGTTGTTTTGTTCAGG
AAAGTGAAAGATTTGAGGGGTAACGATAACCAAGGTGGCTATGCAAAAAT
CAATCAAGAAAAATTTGATGCCTATGAGCCGTAGAATATATGTATGTTGG
AATTATTATAAACAAAAATAAAAAAACGGGGTGCATTTTATTTGATGTTA
TAAATCTTTCTGAGGGAAATAATTGGATTAATATTATGCTAATAGAATTT
TCCTGTCAGTTCTCTCGTTGCATTTTGTAAGTTTTATTTGGGTTGGATGC
ATTAAGGAAGCTAATACCCATTTTAGATTATTTCTTTCTACTAAAGCTAT
TTCTTCAGATCTCTTTGATTTACTTGCCATCTAGCTGCACTCTATAGATA
CTTAAACGAGACTATACTTTATGATAATAATATTTGTTTGTGTAAATAGT
CGCGCTACTTTGTTATTTTCTTCTTGTCTGAACTTCAAAAAGCCCGGGAG
TCTTTCTGGAAAAAGATCCATTATTTGCTAAAATTAAAGGAAAGAATTAT
TATTCCTTTGAACCTACATTTTCTGTATAGAAATTTGGAAATCTGTTTGA
GGTCTAAATCCTCTCCTGTCCTGCTGTCCTGACTCTCCAAAAATTCTTCA
GTTTTTATTTATAATGAGCTTATTGGATTTGTTTCTAGAAAGTGTTCAGA
TGACTTAATTGTATCACATATATTTTTTGTACTGTTTGGTTTATACCTCC
TCCAGAAAACTTTCTCACAAAACTTTAAAACAGAACAAAGCCTACATCAC
AGGTAAAATTTTTTGATTTGCTGATTTTTAGGTTAATGACCCGGAAAACG
TCAAAACCTTTAAGAATGAACCAATCTTTGTGGCACAAAGATAAAGTCCC
TCAAAGCCAATAATCTCAAAATTCATTAATAAATCAGAACCTTTATTTAT
TATTTTTGTATATTTTCTTGTGTTTTAGTTGTATTATTTTCAACTTAGAT
TTTATGTTTTGTATTGCCACACTACTAAAATAAAGAAATGTAATATGAAT
TGTTGTCAAGGGAGATAGAATAATTAAATTCTCTTTTCAAAAGGTTAGTA
AGATAGCTTTAAGTCAATTTGCTTTGTGTACTATTTTTGCTACCTTTTGG
AAACCATGTCGGTGTATTTGGACTAATTCCCTTGGGACTGGTTTCCATAG
GGTAACAAAAAGGAGTGCATCCTTGCTACCTTAATTCAAAAAGGACCTAA
GTCCTTGAAGGGTTAGTTCAAAAGGGGCG

Coding sequence (CDS) from alignment at sc0000126_pilon:162529..165907-

>MSTRG.14825.1.p1 ID=MSTRG.14825.1.p1|Name=MSTRG.14825.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=6012bp|location=Sequence derived from alignment at sc0000126_pilon:162529..165907- (Clytia hemisphaerica_ch_hm2_pilon)
AGACACTTCTGGAAATGGTATTACTGGTGCAAAGATTGACGTCAGCTATC
CTGATGGTAAAACACGGATACCCATCCATTCCAGAGATGGTGGTGATTAT
TACCGATTGCTTTTGAAGGGAAATTACAGTGTTACAGTAAGTGTTCATGG
CAAAACCCTGACTACACAAGTTCATGTTGATGGTCTGCCAACGAAGATTG
TAGATTTCATTGTCGGTCCTGATTCCATTACCGCTCAATCCGTACATGCA
GCTGCACCAGCAGTATCTGGAAATGTTGCAACTGTAAATGTTCCAGCTGT
AAATGTTATGGCTGCTGCAAATCCTGTTGATGATATCAAGAAAGAAGTAA
AAGAACACCAAGGAAAACCTGTGAAGTCCTCCAGATCTGATAATGTGGCA
GCAGCAGCTGTCATTGTCACCATTGGTGTTATCGTTTGCGTTCTGGCTGG
TGTTGTTTTGTTCAGGAAAGTGAAAGATTTGAGGGGTAACGATAACCAAG
GTGGCTATGCAAAAATCAATCAAGAAAAATTTGATGCCTATGAGCCGTAG
GTATTACGAACGGTGCTAAATGGTACAATGTAGCAGGTGGCATGCAAGAC
TACAATTACTTACATGGAAATGCATTTGAAATTACTGTTGAGATGGACTG
TTGTAAATTTCCTCATGGACAACACCTCAAAAAACAATGGGAAGACCACA
AGCGCTCTCTCATTGATTATATCAAACTCTCACATTTGGGGTTGAAAGGA
ACCGTCAAAAATTTTCCAGATCAGTTCAAGAAGATTCGTAATCAACAGCC
AGAAACTGAAGCCATTATAAAATGGTTAGATCAATATCCTTTTGTACTAT
CAGCCAACCTTCATGGAGGAAGTTTGGTTGCCAATTACCCTTTCGATGAT
GATGAGAAGATGAAAGAAATGTATGCAGCATCACCAGATGATGATGTTTT
TGTCCATATTGCAAAGAACTACTCTTACAATCACCCAACCATGCATTTCG
GAAAGACAAAATGTGGGGATCACTTCAAAGATGATGAAGCTGGTTTTTGT
TGTAGTTTTTGGTTTGGTTTTCACTATTTGCCATGCTATTGAGTTCAAAC
ACCACAATTACAAGAATATGTTGAAATATATGAATGACATTCACAAAAAA
TGTCCAAATATAACTCGCCTTTATGACCTTGATAACAAGACTGTGCAAGG
TCGAAGGTTGACTGTTATGGAGATAACAGAAAACCCTGGTAAATATGTCC
CTTTGAAGCCTAATTTCAAATATATTGGGAATATGCATGGGAATGAAGTT
TTAGGACGTGAAACTTTGCTGTATCTTTTGGATTATTTATGTACAAGCTA
TTTGGCTAAGAATCCTGAAACAGAACATTTACTTCAAACAACTCGTATCC
ATATTTTGCCATCTATGAATCCCGATGGTTATGAAAAAGCTGTTGAAGGT
GATTGTTCAAGTGTGCGTGGTAGGGCAAATGGCCATGGCATAGATTTGAA
CAGAGACACTTCTGGAAATGGTATTACTGGTGCAAAGATTGACGTCAGCT
ATCCTGATGGTAAAACACGGATACCCATCCATTCCAGAGATGGTGGTGAT
TATTACCGATTGCTTTTGAAGGGAAATTACAGTGTTACAGTAAGTGTTCA
TGGCAAAACCCTGACTACACAAGTTCATGTTGATGGTCTGCCAACGAAGA
TTGTAGATTTCATTGTCGGTCCTGATTCCATTACCGCTCAATCCGTACAT
GCAGCTGCACCAGCAGTATCTGGAAATGTTGCAACTGTAAATGTTCCAGC
TGTAAATGTTATGGCTGCTGCAAATCCTGTTGATGATATCAAGAAAGAAG
TAAAAGAACACCAAGGAAAACCTGTGAAGTCCTCCAGATCTGATAATGTG
GCAGCAGCAGCTGTCATTGTCACCATTGGTGTTATCGTTTGCGTTCTGGC
TGGTGTTGTTTTGTTCAGGAAAGTGAAAGATTTGAGGGGTAACGATAACC
AAGGTGGCTATGCAAAAATCAATCAAGAAAAATTTGATGCCTATGAGCCG
TAGGTATTACGAACGGTGCTAAATGGTACAATGTAGCAGGTGGCATGCAA
GACTACAATTACTTACATGGAAATGCATTTGAAATTACTGTTGAGATGGA
CTGTTGTAAATTTCCTCATGGACAACACCTCAAAAAACAATGGGAAGACC
ACAAGCGCTCTCTCATTGATTATATCAAACTCTCACATTTGGGGTTGAAA
GGAACCGTCAAAAATTTTCCAGATCAGTTCAAGAAGATTCGTAATCAACA
GCCAGAAACTGAAGCCATTATAAAATGGTTAGATCAATATCCTTTTGTAC
TATCAGCCAACCTTCATGGAGGAAGTTTGGTTGCCAATTACCCTTTCGAT
GATGATGAGAAGATGAAAGAAATGTATGCAGCATCACCAGATGATGATGT
TTTTGTCCATATTGCAAAGAACTACTCTTACAATCACCCAACCATGCATT
TCGGAAAGACAAAATGTGGGGATCACTTCAAAGATGATGAAGCTGGTTTT
TGTTGTAGTTTTTGGTTTGGTTTTCACTATTTGCCATGCTATTGAGTTCA
AACACCACAATTACAAGAATATGTTGAAATATATGAATGACATTCACAAA
AAATGTCCAAATATAACTCGCCTTTATGACCTTGATAACAAGACTGTGCA
AGGTCGAAGGTTGACTGTTATGGAGATAACAGAAAACCCTGGTAAATATG
TCCCTTTGAAGCCTAATTTCAAATATATTGGGAATATGCATGGGAATGAA
GTTTTAGGACGTGAAACTTTGCTGTATCTTTTGGATTATTTATGTACAAG
CTATTTGGCTAAGAATCCTGAAACAGAACATTTACTTCAAACAACTCGTA
TCCATATTTTGCCATCTATGAATCCCGATGGTTATGAAAAAGCTGTTGAA
GGTGATTGTTCAAGTGTGCGTGGTAGGGCAAATGGCCATGGCATAGATTT
GAACAGAGACACTTCTGGAAATGGTATTACTGGTGCAAAGATTGACGTCA
GCTATCCTGATGGTAAAACACGGATACCCATCCATTCCAGAGATGGTGGT
GATTATTACCGATTGCTTTTGAAGGGAAATTACAGTGTTACAGTAAGTGT
TCATGGCAAAACCCTGACTACACAAGTTCATGTTGATGGTCTGCCAACGA
AGATTGTAGATTTCATTGTCGGTCCTGATTCCATTACCGCTCAATCCGTA
CATGCAGCTGCACCAGCAGTATCTGGAAATGTTGCAACTGTAAATGTTCC
AGCTGTAAATGTTATGGCTGCTGCAAATCCTGTTGATGATATCAAGAAAG
AAGTAAAAGAACACCAAGGAAAACCTGTGAAGTCCTCCAGATCTGATAAT
GTGGCAGCAGCAGCTGTCATTGTCACCATTGGTGTTATCGTTTGCGTTCT
GGCTGGTGTTGTTTTGTTCAGGAAAGTGAAAGATTTGAGGGGTAACGATA
ACCAAGGTGGCTATGCAAAAATCAATCAAGAAAAATTTGATGCCTATGAG
CCGTAGGTATTACGAACGGTGCTAAATGGTACAATGTAGCAGGTGGCATG
CAAGACTACAATTACTTACATGGAAATGCATTTGAAATTACTGTTGAGAT
GGACTGTTGTAAATTTCCTCATGGACAACACCTCAAAAAACAATGGGAAG
ACCACAAGCGCTCTCTCATTGATTATATCAAACTCTCACATTTGGGGTTG
AAAGGAACCGTCAAAAATTTTCCAGATCAGTTCAAGAAGATTCGTAATCA
ACAGCCAGAAACTGAAGCCATTATAAAATGGTTAGATCAATATCCTTTTG
TACTATCAGCCAACCTTCATGGAGGAAGTTTGGTTGCCAATTACCCTTTC
GATGATGATGAGAAGATGAAAGAAATGTATGCAGCATCACCAGATGATGA
TGTTTTTGTCCATATTGCAAAGAACTACTCTTACAATCACCCAACCATGC
ATTTCGGAAAGACAAAATGTGGGGATCACTTCAAAGATGATGAAGCTGGT
TTTTGTTGTAGTTTTTGGTTTGGTTTTCACTATTTGCCATGCTATTGAGT
TCAAACACCACAATTACAAGAATATGTTGAAATATATGAATGACATTCAC
AAAAAATGTCCAAATATAACTCGCCTTTATGACCTTGATAACAAGACTGT
GCAAGGTCGAAGGTTGACTGTTATGGAGATAACAGAAAACCCTGGTAAAT
ATGTCCCTTTGAAGCCTAATTTCAAATATATTGGGAATATGCATGGGAAT
GAAGTTTTAGGACGTGAAACTTTGCTGTATCTTTTGGATTATTTATGTAC
AAGCTATTTGGCTAAGAATCCTGAAACAGAACATTTACTTCAAACAACTC
GTATCCATATTTTGCCATCTATGAATCCCGATGGTTATGAAAAAGCTGTT
GAAGGTGATTGTTCAAGTGTGCGTGGTAGGGCAAATGGCCATGGCATAGA
TTTGAACAGAGACACTTCTGGAAATGGTATTACTGGTGCAAAGATTGACG
TCAGCTATCCTGATGGTAAAACACGGATACCCATCCATTCCAGAGATGGT
GGTGATTATTACCGATTGCTTTTGAAGGGAAATTACAGTGTTACAGTAAG
TGTTCATGGCAAAACCCTGACTACACAAGTTCATGTTGATGGTCTGCCAA
CGAAGATTGTAGATTTCATTGTCGGTCCTGATTCCATTACCGCTCAATCC
GTACATGCAGCTGCACCAGCAGTATCTGGAAATGTTGCAACTGTAAATGT
TCCAGCTGTAAATGTTATGGCTGCTGCAAATCCTGTTGATGATATCAAGA
AAGAAGTAAAAGAACACCAAGGAAAACCTGTGAAGTCCTCCAGATCTGAT
AATGTGGCAGCAGCAGCTGTCATTGTCACCATTGGTGTTATCGTTTGCGT
TCTGGCTGGTGTTGTTTTGTTCAGGAAAGTGAAAGATTTGAGGGGTAACG
ATAACCAAGGTGGCTATGCAAAAATCAATCAAGAAAAATTTGATGCCTAT
GAGCCGTAGGTATTACGAACGGTGCTAAATGGTACAATGTAGCAGGTGGC
ATGCAAGACTACAATTACTTACATGGAAATGCATTTGAAATTACTGTTGA
GATGGACTGTTGTAAATTTCCTCATGGACAACACCTCAAAAAACAATGGG
AAGACCACAAGCGCTCTCTCATTGATTATATCAAACTCTCACATTTGGGG
TTGAAAGGAACCGTCAAAAATTTTCCAGATCAGTTCAAGAAGATTCGTAA
TCAACAGCCAGAAACTGAAGCCATTATAAAATGGTTAGATCAATATCCTT
TTGTACTATCAGCCAACCTTCATGGAGGAAGTTTGGTTGCCAATTACCCT
TTCGATGATGATGAGAAGATGAAAGAAATGTATGCAGCATCACCAGATGA
TGATGTTTTTGTCCATATTGCAAAGAACTACTCTTACAATCACCCAACCA
TGCATTTCGGAAAGACAAAATGTGGGGATCACTTCAAAGATGATGAAGCT
GGTTTTTGTTGTAGTTTTTGGTTTGGTTTTCACTATTTGCCATGCTATTG
AGTTCAAACACCACAATTACAAGAATATGTTGAAATATATGAATGACATT
CACAAAAAATGTCCAAATATAACTCGCCTTTATGACCTTGATAACAAGAC
TGTGCAAGGTCGAAGGTTGACTGTTATGGAGATAACAGAAAACCCTGGTA
AATATGTCCCTTTGAAGCCTAATTTCAAATATATTGGGAATATGCATGGG
AATGAAGTTTTAGGACGTGAAACTTTGCTGTATCTTTTGGATTATTTATG
TACAAGCTATTTGGCTAAGAATCCTGAAACAGAACATTTACTTCAAACAA
CTCGTATCCATATTTTGCCATCTATGAATCCCGATGGTTATGAAAAAGCT
GTTGAAGGTGATTGTTCAAGTGTGCGTGGTAGGGCAAATGGCCATGGCAT
AGATTTGAACAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.14825MSTRG.14825Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14825.1.p1MSTRG.14825.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14825.1.p1.exon4MSTRG.14825.1.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14825.1.p1.exon3MSTRG.14825.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14825.1.p1.exon2MSTRG.14825.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14825.1.p1.exon1MSTRG.14825.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000126_pilongenomesc0000126_pilon:162529..165907 -