MSTRG.14832.3.p1 (mRNA) -

Overview
NameMSTRG.14832.3.p1
Unique NameMSTRG.14832.3.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000126_pilon:281925..287145+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.14832.3.p1 ID=MSTRG.14832.3.p1|Name=MSTRG.14832.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5221bp|location=Sequence derived from alignment at sc0000126_pilon:281925..287145+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATAGTACAATCTTTTAGAATGGAGTTTTTAATCTATTTGATTGGGAT
ATTTTCAATTGCAGTTTTTTCGACGAATGCTTCATCTTGCCCGTAAGTAT
ATAAAgtcaatgttttattttttgtctcagacattttttaaagaagaatt
CGCTGAAAAATTgttggaaaatatatttattttagcCATAACTccccccc
ccTTCGTACAGACCCCGTGAGATTTAATttgccagtgggggtaaaaatac
cGAACCAAAACTCaacggggattgatatttccattttgctcatgactggg
gatttgaatCTCATATTGTTTTTGagcaagaaaattcagtgggatggaaa
aaatagcacaataatttgcagtgaggattggcttatctgattatttccag
tggggacaaaaattggaggacaATTTTCCACCaggaacgatattttggtc
aattttttccaatggaAAGGCTTCCCTTTAGGGCTGTGAAAAGGGAGCTA
TAATTTGAAATGATGAAAACCAGAAgcttatcatgtttttatttaaaaat
tggaTATTCGAACTTCATAAAAAAGGTTACTCGGCAGACTGTAAAAATCT
ATCAACAAGATAAgatcttaaaaaaattatatctagTTAATAAAATTAGA
AAGTTAACTATATAGAGAGCGAGTTGATTGGATTGGTTTGTATAGGGCCC
GGGAGGGGGTACTAAGGCAAAATGGGTTAAGGGGATGCGCCGCTGgacag
ggtaccttttttaacctccacgagtcccaggtagggttgcaaaaacacca
atatagaaaaatcagtccctcgcagggtgcctatttttggaaaatttgcg
ggaaaagtagaaaaatttagaaaattttggaatttcagtcccattcaggg
tcacttttttcgcaaatttccgCAAACAAACCAGTTTAATATTTCCGTAT
GGCTGCTATAGATGAAGAAAACTCGTACCTAGAGCGACTTGCACcccttt
tttgttattttgttactGAGAACAAACAAAATTCTATCAAAGTTGGTATC
GAAGGTACAGGGttcatttttcaaccatttCTCAACCGTTACAATCAATC
CCagaaatgggctattccagaaaaaatttgcacccaactttcgaccctcg
gagaaaacaaagaaatattttgtgaattttacgacccttaccgggataaa
tttgaccaattttgaccaaatttcgatctttctgggcgtaaaaagttgaa
attttcctatttctcctacccttagtgggactgaaattagattttctaat
ttttcagactTTGGAAATcctaaaaaggtacccttaagggcaacacatac
cgtaccctccatttagctaacaccacccccccccccgggatttgcacccc
tatgttgaggaggtacTATTTGGAAAGGTGTCCTcctgaattttttaaaa
aaatttcaggaccAGCATGGACtttcaacctcattttactgaaGGATTTT
TACACTCGGCAAGGAGACACCCtgagttttttattttccaaagcaccata
gacctcctcaacatagggggtacagactatttctggaatagcccaatctg
ttatattcatttttcaaagcCTGTAATATTCATATTGAATTGGATCATAA
ATCTTATTAAGGATATCTTCTTAGTCGATTCTCTAGATATTTATGAACTC
TGCTCTAGGAACATACcagttaaaaattttcaatgaaatttgatgtccta
aattttttaacgttttaGCCTAAAAGTGTTCCTAAACATTCTAAAatcac
tattttgtgagtattttgatgtgatttttgttttagagttcgTAAAGctt
ctcaaaatgttcttaattttttcttaatatcGTGGCCATCAAACCCTTTT
GTTCCTATAAAGTATGTTCTTAGTATAAAGCAAGATTTGATAGGATAATG
GTAATTTTATCACTGTCCCTTCAAACAAGCATCATAATCCTGCCCCATGA
TGAGCATCAGTTTAATGAAAGTTTTTGTCTGGTATGTCAAtctggcccgg
ggggggggggtactaggtttgcgaggtgacgggtatgtccgagccgaaaa
tcaaaaatcgaccctttgagagacaaatggtgattttgggaccctttgag
agactttttcctaaattttggtccactttttccaaattttggtttgattt
tcaccaaattttggtcaaaatttttggaaatcgtgatcctttgagagaga
aatttttgattttcgtgattttgggaccctttcagagactaacttttgaa
tttatacccctttgagagacttttgaggaatgagaaaaggtacccttatg
gctcgcacatacccggcacccattttgcctaagtaccccccgggcAATCT
GGGTATGCGTCcctcttttttataaattattgaGAGTCGTCTAAACCACA
TTGAGGTTTGCTGGATTCACGGTGTCCCCACTGCACACACAAATGACCTC
AAATCATGAAGAACAGTGAAGAAGATAGTGCTCAATAACAAGTAGAGCTA
AATCATTTCATGTATTTCTcttcaaatattaaaaacaaacattacaCTGT
GTTTCACGCACAAGGCGATCATCAGATGtggataaaaatttttctacGAA
CAAATTCTACTTGTAGAAATCGAAATACCTAGTCCCAAAGGGAATATCTA
AATAAAGCgttaaaatataaaacataataGGATAGTGATTACATAATGTA
CAtgattaaaaagttgaaaaggtgCATATAAAACTATCAACTATCAACGA
CCCGGGCAAATTTTACATTGGTCTCACTGGCAACACGTTCAAGGATCGTT
GGAACACACACAAATACACACTGAGACACGAAGATGCTACAAGCCACACC
CAGCTCTCAAACCACTATTGGGATTTGAAAAGATCAGGCGTCACTGACCC
AATTCTCTCCTGGGAAATTATTGATCAAGCTGCATCATACAAAAATGGAA
CAAAAACGTGCAACCTTTGTTTGGCAGAAAAATTTCACATTGGCTgtgtt
tagaccagcctggcgtTTGTAAtagcttgcagtattcttttgaattctat
tgttccgcgcaattgttcggtttgtcaaatgcctaatgatgccagcgtgt
tggcattacgttggcatttgaaatgccattttgagcaaaggaatcccctt
ttctggcatttcaaatcaaacaaaggaaccaaaacaaagagaaaaaatga
catttttgaatttttatttgcacgttttttattcagttctttctatagat
tgtaaaatttgcaaaatttgccatagcctagccctacggcaaaaagtttc
agtcttaatgactgcagtttttgagaaatttcatgcttttcattgtttga
tctgtcaaagttgaacttgagggaatcaccttttcagtaatgactctaaa
aagacgattccttaaatgccatgacagaaaatacaatggaaaagctatta
aaatcgaatccctcgtgagcaaatgccaaattacaaatgccagttggtct
aaacgcagccattatCACTTCCAAACGCAAACTAGTgaacaaaaaaactg
aattagTCTCTAAATGCAGGCATACAAACAGATTCATTCTAAAGAACTAT
AAATCAGTCCCTCCGGACAAATAGCTTTTATATGcaccttttcaactttt
taatcaTGTACAATATGTAATCACTATCCtattatgttttatattttaac
GCTTTATTTGGATATTCCCTTTGGGACTAGGTATTTCGATTTCTACAAGT
AGAATTTGTTCgtagaaaaatttttatccaCATCTGATGATCGCCTTGTG
CGTGAAACACAAATGACCTctatttttacacttttttctattgtttatag
gtgcgaaaaaaagactgagatagttttagggtggtaaaacagacGAAAAA
ATTACCAcgcagcaattggcggctacggttgaaaaggtgtagtGCATTCC
ATGGCACGTTGTACCTTTCTTAAAAACACCCGCATTTTTTCTCTTCGAGA
AAATTTCTAATTAATCTCACTTTATGATCTTTAGAACTCGTTCCAATGTT
ATCACATTCGATGACATCAAACACTCAGCGCGAGCGTCAAGAGAAGTCTA
CAAAGATGATAAAGCAGTTATTGGCGCTACAATCCGCAAAACACCATACA
AGATTGTAAGAGTTTTTGAAGAAGAATTATTTGAGAAAGGAGAAGGAATT
CGTGTGGCGATTGCAGATCATGGAAACACAAGAATGATCATTTTCAGAGG
AACCGACGGGTAACATACTGATTTTTTCATGTTCTTAATGggttattcca
gaaaaaatttgtaccccctatgttgaagagatctttttttaagaagataa
ccccctggatttttttccaatttttcaggacccccttggatttttttctc
ccatttttttggaccaccctggattttcgacctcgttatacttaccaccc
tggattttcaaccccggggggggggtactagggttggcgaatgaggggta
tgtgcggacgggacctccgaaaaccgacccttagagagattgatttttgc
tgaaaaggtgacccttagagagactttattacaactttttctctggaaat
caaaagatttcctaaaaatcctgatttttccgatccttagagagactttg
aaagatgaaaaaaccGACACATAGctatcatccatttttgcctaagtacc
cctcccccggGTTTTCAACCCAATTTTACTGACCACTCTGGATTTTATCA
TCCACCTTGgagtttttattttccaaaccaCCCTGGAAGTCACAtttcct
caacatagggggtacagactatttctggaataaccTGCAGCCATAGTTCG
GAGGCACACAACGGCTTCTCCCTGAATTCCTCAAGTTACCCTTGATCATT
GAGCATCAAGAGGCATCAACCTTACTGGAGATTGAACCTAAGCCTTGCAC
TCCTTTAGCACCACAGAGCGCTGTTCTTGATAAGTTTAGAAATTAAATTA
CAAAtataatcataaaatatgaaGGACGGGTGCAATTGaatttgttttag
tttttaaacACATCGGGTGCTACCAAATggttgcaaaaaaaacaaagaaa
ctgaACTACCAATCTTGAACTtgcttctttctttttcaagccAGCCTCAT
TCAGCTTCTACGCGAGGGAGC

Coding sequence (CDS) from alignment at sc0000126_pilon:281925..287145+

>MSTRG.14832.3.p1 ID=MSTRG.14832.3.p1|Name=MSTRG.14832.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1026bp|location=Sequence derived from alignment at sc0000126_pilon:281925..287145+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATAGTACAATCTTTTAGAATGGAGTTTTTAATCTATTTGATTGGGAT
ATTTTCAATTGCAGTTTTTTCGACGAATGCTTCATCTTGCCCAACTCGTT
CCAATGTTATCACATTCGATGACATCAAACACTCAGCGCGAGCGTCAAGA
GAAGTCTACAAAGATGATAAAGCAGTTATTGGCGCTACAATCCGCAAAAC
ACCATACAAGATTGTAAGAGTTTTTGAAGAAGAATTATTTGAGAAAGGAG
AAGGAATTCGTGTGGCGATTGCAGATCATGGAAACACAAGAATGATCATT
TTCAGAGGAACCGACGGCCTCATTCAGCTTCTACGCGAGGGAATGATAGT
ACAATCTTTTAGAATGGAGTTTTTAATCTATTTGATTGGGATATTTTCAA
TTGCAGTTTTTTCGACGAATGCTTCATCTTGCCCAACTCGTTCCAATGTT
ATCACATTCGATGACATCAAACACTCAGCGCGAGCGTCAAGAGAAGTCTA
CAAAGATGATAAAGCAGTTATTGGCGCTACAATCCGCAAAACACCATACA
AGATTGTAAGAGTTTTTGAAGAAGAATTATTTGAGAAAGGAGAAGGAATT
CGTGTGGCGATTGCAGATCATGGAAACACAAGAATGATCATTTTCAGAGG
AACCGACGGCCTCATTCAGCTTCTACGCGAGGGAATGATAGTACAATCTT
TTAGAATGGAGTTTTTAATCTATTTGATTGGGATATTTTCAATTGCAGTT
TTTTCGACGAATGCTTCATCTTGCCCAACTCGTTCCAATGTTATCACATT
CGATGACATCAAACACTCAGCGCGAGCGTCAAGAGAAGTCTACAAAGATG
ATAAAGCAGTTATTGGCGCTACAATCCGCAAAACACCATACAAGATTGTA
AGAGTTTTTGAAGAAGAATTATTTGAGAAAGGAGAAGGAATTCGTGTGGC
GATTGCAGATCATGGAAACACAAGAATGATCATTTTCAGAGGAACCGACG
GCCTCATTCAGCTTCTACGCGAGGGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.14832MSTRG.14832Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14832.3.p1.exon1MSTRG.14832.3.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14832.3.p1.exon2MSTRG.14832.3.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14832.3.p1.exon3MSTRG.14832.3.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14832.3.p1MSTRG.14832.3.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000126_pilongenomesc0000126_pilon:281925..287145 +