MSTRG.13555.1.p1 (mRNA) -

Overview
NameMSTRG.13555.1.p1
Unique NameMSTRG.13555.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000108_pilon:685919..688421-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.13555.1.p1 ID=MSTRG.13555.1.p1|Name=MSTRG.13555.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2503bp|location=Sequence derived from alignment at sc0000108_pilon:685919..688421- (Clytia hemisphaerica_ch_hm2_pilon)
GCTATTGATCTTTACTTTCATTGGTATTGATAAACTAAATTCAAAAAGTA AATAGACCATGAAGTTTTCAAGCAAAACCCCCTGGTTTGTGACTTGATCT TTATGCTGCCTCAAGACGCACCAAAAATAATATGTTACCTCGACAACCAA AACTATAAAAATCTTAAAGTAAAGGTAATCTGACTTTGTTTGTCACCCTT TCAATTTCGTCTACAGATAGAACGGGTGACAAAAACAAAGAAGTCTTGAA AGGCGAAAGGCTCATTCACAGCTTTTTTCAAGGTTTAAGGTGTATGTGCT TTTAAGCGCTGCGTATTGTTTAACGGTTTTCTTTTTCCTTCTTTCTTTTC TATTGGGTTGGTGTAATTTAAGATGCACGATCTAACGATTTACGATTCGC GATGCGCGATCCATGCATAAAATATGCTGATTATTCCTAATAATTATCAT AAAACTTGAATCATATAACATAATTCTAAAACAATGGCATAATCTTTTCT CACTTTTGTTTACCACAGTAAATTTATCCAAAAAGAAATAAGTAAGAGCA ATGGAACTACGAATAATTACGACCGTAAAATTATGAAAAAAATTACATAA TCTTACAATAGAAAGAAAGTGAAAGTAATAAACAATGCACAAGAAAAATT TTTGCTCTCAGTTTTAACAATCATTAATCGAATATATAGAAATTTCTATC TTAAAGCAAATATAAGAATATATTGTAGAACAATATGTTTTGCGGACCGT AATGTACGAAGCAAAAAACGGGTGCTCCATTATGAAAAAGAATTTTCTTC CGGTAAACAATTCCCCTAGATTGATTCAAATTATGAAAAAGAGAGAGAGT TCAGAAGGTGAATGCACGTGGCTTTCACTTTCTTTTAATCTATGAAAACG CACTAAAAGCTTTTTTAAATATAATTTGTATAATCTTACATAAATGATGT TTTTAAAAATAATTGAGCTCCAGCGAATGAAAGTTTGTAAATGGCCTAAA TATTTTATCATGATTAGCATAATTACGCATGAATTAACATATTTTATGCA CGGATCGCGAATCGTGCATCGTAAATCGTTAGATCGTGCATCTTAAATTA CACCAACCCTTTTCTATTGACTACGATAATTTTAATGCAATGACAGATTT ATAAAAAAATAACATGGATTTAAGCAAAGGAAAAATGAGAATCATCTCTG TTGGGCCAACAGGTGTTGGCAAATCAACAATTGGAAACAAGCTTCTTGGC CTATCGCCTAATGACTTTCGATACTTGAAAGCAGAAGCATCATCGATGAG TTGTACTCAAGTTCCTGTGACAGTTCAAAAAGGGAATGTTATGTATACTG ATGTACCTGGGTTGCCAGATACTAATCCAGATAAAACAAAGATCTTTTAT GATGTTATCATAGAAGAAGCTAAAAAACCACTCACTGCTATTTTCTTTGT TTTTGCGGTCGATATGAGAATGGATAAAGCAACGAAAGATCGGATTAGGA ATTGTTCATTGCTTTTCAATGAAATCAATAGATGCTCTGCTGCTAAGATC CTGATTCTAAACGACATAAGATCTTGGAGCAATCCAAATTGCTTAGATGA GAAAAGTGAGGAATACAAGACAGAAAAAGCCATATATGACCAAGTTCGTC TTGACGCACAAAAACACTACGAACAAGATATTAAGAATACAACGGGAATC GAGTTTTATTGCACCAAAGTCATCAATGGTATTAACAAAAAGATAAATCC AGATAATAACATGAATGTAGTCTTGCATTACCTGGAATTGACACTTCAGA GTTTCCCTTGTGAAGCATCACCACATTTACGTAATTTTAAAATGTTGGAA AAAGTTGTGACAAACGCGAGGGAAAATTGTGACTTTGAGCAACAGTTAAT TGACGATCAAGAGAAAATTATTAAAAGTTTAGAAAAGTCAATTTCCGCTT TAAAAGTTACGGAAGGAGTTTCTGTAGGCGCAGTTGCTGTAGCAGCTGTT GTTACAGCTTTTTTTACTACTGGTGTTTCATTAGTTATTGCAGGTGTCGC TGCTGGTGTTGCAAAATTGACTATAGTAGCGTCGACGAAAATAGCAATTG CTTTGAAGGAAAAAGAGTTGAAAAGTGTGAAAGAAAAATTGAACAAGGAC AACCTGAAAAAATATATTTCTGAATATAAAGAACAATGTAAATTATTTGA AGATTTAAAAGCAGCTCTTAATGAACGATAATATAATTTCACTACATACA CAGGATAATAAAGTTCGAGTATTGACAACGCACGACAATGAGTCAAATAC AACTTTAAATTATGTTTTTGTAATTTTTTTCAAAAAAGAACGAGGATTGA TTACAAAAGGATTTATTCAATGTTTTGAAAAAAATACAAACTTTTTTTTA TGAGAATAATGTACTTTGGATGAGGGTCAAGTAAGTGCCAAAATTGAGGG TGAAATATTCTTAACGTTTTCTTACTTTTTCAGACTTGACTTTTTTTACA AAC

Coding sequence (CDS) from alignment at sc0000108_pilon:685919..688421-

>MSTRG.13555.1.p1 ID=MSTRG.13555.1.p1|Name=MSTRG.13555.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=936bp|location=Sequence derived from alignment at sc0000108_pilon:685919..688421- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTTGTACTCAAGTTCCTGTGACAGTTCAAAAAGGGAATGTTATGTA
TACTGATGTACCTGGGTTGCCAGATACTAATCCAGATAAAACAAAGATCT
TTTATGATGTTATCATAGAAGAAGCTAAAAAACCACTCACTGCTATTTTC
TTTGTTTTTGCGGTCGATATGAGAATGGATAAAGCAACGAAAGATCGGAT
TAGGAATTGTTCATTGCTTTTCAATGAAATCAATAGATGCTCTGCTGCTA
AGATCCTGATTCTAAACGACATAAGATCTTGGAGCAATCCAAATTGCTTA
GATGAGAAAAGTGAGGAATACAAGACAGAAAAAGCCATATATGACCAAGT
TCGTCTTGACGCACAAAAACACTACGAACAAGATATTAAGAATACAACGG
GAATCGAGTTTTATTGCACCAAAGTCATCAATGGTATTAACAAAAAGATA
AATCCAGATAATAACATGAATGTAGTCTTGCATTACCTGGAATTGACACT
TCAGAGTTTCCCTTGTGAAGCATCACCACATTTACGTAATTTTAAAATGT
TGGAAAAAGTTGTGACAAACGCGAGGGAAAATTGTGACTTTGAGCAACAG
TTAATTGACGATCAAGAGAAAATTATTAAAAGTTTAGAAAAGTCAATTTC
CGCTTTAAAAGTTACGGAAGGAGTTTCTGTAGGCGCAGTTGCTGTAGCAG
CTGTTGTTACAGCTTTTTTTACTACTGGTGTTTCATTAGTTATTGCAGGT
GTCGCTGCTGGTGTTGCAAAATTGACTATAGTAGCGTCGACGAAAATAGC
AATTGCTTTGAAGGAAAAAGAGTTGAAAAGTGTGAAAGAAAAATTGAACA
AGGACAACCTGAAAAAATATATTTCTGAATATAAAGAACAATGTAAATTA
TTTGAAGATTTAAAAGCAGCTCTTAATGAACGATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.13555MSTRG.13555Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13555.1.p1MSTRG.13555.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13555.1.p1.exon2MSTRG.13555.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13555.1.p1.exon1MSTRG.13555.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000108_pilongenomesc0000108_pilon:685919..688421 -