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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000103_pilon:877537..883641- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13203.1.p1 ID=MSTRG.13203.1.p1|Name=MSTRG.13203.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6105bp|location=Sequence derived from alignment at sc0000103_pilon:877537..883641- (Clytia hemisphaerica_ch_hm2_pilon)
CTTTAGGCCACTTTAGACAATTTATTTTTTATTTTATTTTTAGCTTTCAA
GTGGATTTTAGAACTTTGTATAGAAAATATTAATCGCTTAAGCACAGTAA
AGACATTATACCCTCCTCGATCATCGATTCGTGCACTCGTTTGATGGGTT
CAAGCGTGATTGGAAGCTTCTTGGTTGCAGGCTTAGAACAAGTACGTTTA
GACGTCTCTAAGATATAACGGGTCGGTTTAGTTATTGACATTATGAGTGT
GTTTGATTGCGTAAAAGCAACTTTCAATCACTGAAATGATGTTCCTGACT
GTATGGGGCTGACGAAGAACAACACCTAGGGGGGGGGGGGTTGTAAAATC
GTTCGACTTTTTTAGTCAAAGCACTTGTTAGTTTGTTATACATCTTTGGA
AAGTTAAGGGGTAGGGGAATCAAAATAACATAGATACCATTTTTTTTCAG
ACACTTTGCTGTGTTTTTCGGACAAATATGACGGTCTTAGGCAAAACCAT
AAGGTCAGAATTGATATTAATACCTAACTCGAGATATTGAGCTTCAAAAA
TTGGAAAAAGTGAGCAAAATAGCTGTTTCTGACTGAAAAACACTATTATT
AAGAGTCTCTTGTCTGAGATATCGTCTGACACACTTTCTGACTCATAGAC
ATGTTTTTTTTAAAGCAAATGTCTGCCCTTTGGTCAGGTCCGTGTATGAC
ACCCCCTTCTCACAGACCCAGTGGAATTTTTTCAGCCAGTCAGGATGAAA
ATAATGGACTGAAACTCGATAGGGATTGATATCCACATATTTTTTGTGGC
TAGGGATTTAATTTCTTTTATTTTCAAGTCAGAAAATTCAGTAGGGATGG
GAAAAATAGCACAGTAGTTCGAAGTGAGGATCAGTTTGTTTATTATTTTC
AGTGGGGACAAATATTGGAGGGTAATTTTCCACCGGGGACAATATTTTGG
CCATTTTTTTCAGTGGGGAGGGGTACCAGTGGGTCTGTGAGAAAGCAAGG
GGTGTTGTATGCTTAAATTCTCAAAGCATCCAGGCATAGCTTATGCTTAT
CATATGCTTATGAATCATGCTTTATGATTCACCCCGAGCCAAGTTTTTAG
TTAAATGTTAGAAATTTTGTAAAGTTTGTAAAATTTTGAGCAGTCGAATG
TAGCTAGCCGTGGAATGTCTTTTTTTACTTGACCTCTACCAAACCTTTTT
AAACAGATATAAAAAATGACAACTTGAAAAATATTTCAGGCTGACATATA
TGCTTATGTTATGCTTGGGAATTCTGCAAATCTGAGCCTTCATATGCTTA
TATAAAAACAACATATTTCAAATATGTACAGTATGACCATTAAAATATTA
TTTATATTATAATCTACATTCGTATCAAAAGTATGACACTAAAGGCAATA
AAAACAACATGTACTCCTTAACCGTGGCCCAGTCAGCTGGAGACTTATCA
GCTATTATTATAAGTTTGTTTCGATGATTAATATCCCTTATGACCTGCTT
GACCAAAGCAGAAGATCTCTTCTTTAAACCAGCCTCGATAAACTCCAGTA
AATCTTCAACGTCCTCTTTGATGTTTTTGTTAAATTCAGCTTGCTTTTGG
TTAGACTTGAACTTGGTTTCTGATTCGCGTCTCTTTCTCTTTTCACCAAT
ATCAAAATACTTATGCAAGGATGAATAAATAAATCTAACATAAATAATCT
AACAACCTCTGAATAGCTTCGGACAGCCACCCTTTTTAAAACCTGGCATC
GCGTGACTATGAAGCGCCAAAAGAACAATAATAAATTCTTATCGGATAGA
TACATAGGTTAAAATTTGTTAATTTTTGACCATTTTTCATCAATCTAAAT
CACTCAATCACTCAATTAGCCGTTCACGTCCTAAACGAAGACATTCCAAA
GAGCTTTTACCAAACTTTGCTAATGACGGCTTCAATGGACCCAAAACGAA
TAAACTACCAAGATAAGTTATATCTGCACAATCGATTAAGTCGTTTAGAG
AGAGACTTAACGATGCATGGAAAAACCACCCACAAAGATTTGTTGTAAGA
GGAATGTGAAAGAAGATCGGTTAGAGACGCACCGTGAGCATAGCTTGTAA
ATCTTTATAGTAATGACAATAATAAAGGATTTTAGTTATTGTTTGTGTTT
AATTTGTCCGTATATTTGTATATGTTCCGCTAGTTGATTTTTGATTTTTC
TAGAAAATTGTTCAACATTTTCAGTATTGCTATCACTCTGACGATGCTTT
TGTTGTCAAGCGAAATATTAGTTTTTTTTCAAAAAATGAAAATTTTGTTG
TTTGTGATCTGACTCCACATTGATCCATGGCAAAATCAATTTTCGGATTA
AGTTTTATCTTGTTTTTATTTGTATATGTGTTGTGTTGTTATGTAATTCA
TTTAAAATTTTTGACCATGGGCTTTAACTGTAATATCTATACATACATAC
TATTTTAGACATGCTGGCTAAATCGATCTGGTCAGCCAGGATGCAGTACG
CAGTGCTGATGTCCCAATAAGTACGAAATTCATATGCTGTTCTGCCACCC
AAAATTTCCTGAGTGTATATAGTTGGACAGAAATTCTTCATTTCTTTACA
TATATATTTTTTAGATTTTAATAATGATGAAATACGATAAAGAGATGTAT
TTGAGCAAAGAGTATCAACATTGGATCAAAAGTAGAACCATTTTTACATG
GCTTGCATTCAGTATGATACTTCTCTACGCAATGGAGCAACAATGTACCA
AGTACTTTTTAATGTACTACATTCAAGATCGATTTGGATTGACTGAACAC
AATGCTGTCATCTTTTACAGTATTTCGGAAGCTATCTATGCTATTGCACA
AATCACTGGTGGTATTGTATTAGGCAGATATTCAGATCGCACTCGTAATA
TGAAAAAAGTCGTTCTTATTGCAATGCTTGTTTCCTTTGTTGGTAATACC
TTTTACGTGTGGCATGTTAACCTTTTTCTTGTGGTTATTGGAAGGGCTTT
GATGGGATTTACTGAATGTGTGAACACAGCTGTCGTAGGTAAGTTTTTTT
CTTATTTGCTGGTCTATTCACCCGGGGGAAAGAGCACTCGATTTCTAAAC
GAAGACATTTATTGTGTGTGCCACCAAAAACTGGCTTTCAAAATCGGACC
CTTACAGTGTAGCCTTTGAGCAATAAAAAGGAAACATTACAGTGCATTTT
ACCGAATGTTTCTGACCTTTACAGTGTAGTTTGAATTGATATCTTATTTT
GCTGAAACCACCTGAAAATGAGCCGCATATGTCGCGACATAATGTGCAAA
ACAAATTTAACAAATGTACATCCTTACAGTGCATTTCAAGGGTCCCGACA
AACCGGCACATGCCGTGGGCCAGACCATATAAGTCCCCCCTGGGTCTATT
TGTAGGAGGTCAAACCCCATGATCTTTCACGGTACACGACAACATATGCT
TAGTTGGGGATAGAGAAAGGATTTTAAAGGGCTCTGCCCATAGTGTTTTT
GCTTTCTATTTTTCACATTTAGAATGTTACACATTTTCTGTCGGGCACGA
GGAGGGACAAACAAAATAAAAAAATCAAAACGAAATAAACAAATCAAAAC
TAAATAAAAAAAGAAGAAGAAAATAAAAAACAAAAACAAAATAAAAAACA
AAAAGAAAAAGAAAAAAAGAAAAATAAAATAATAAGAAAAAACAAAATAA
AAAAAGAAAAACGAAATAAAATATAAAAAACAAAATGAAAAATCAGCAAA
TAAAAAAACATAGAATAGAGAATCAAAGATGATGAAATGAGGATTGTTGT
TTTTCTTGCTCATCTTGTTCATCTAGCATGTTCTGTGAATCTTTTAGGAC
GCTAAGAAGAAAGGCAAATCTATTTTGTTATGATTATGGGACTCCTTTTC
GCCCAAGGAATAAAGACGAGGAGGGAGAAAAAGATGAGCAATCTCTCATA
ACGAGATACGTTAACAATGGTCATACACATACGAGGCAATAATTGGGAGG
GAATGCAGCTTTGAAGTTTCTGCATACACGTGCATGAGAAGACGCCATCT
TGTTTCTAGAATAAACATAAACTCTAGATCACCACTTTCGGTTTCTTCGA
GTAACACGCAGGCGCGCATGCGCAAAATAACTTTTTAATTTTTGCTTTGT
CTTTTTTATTTAGTTTTTTCTTTTTTTTTCACTCTGTTTTTCTTTTTCTA
TTTTGTTTTTCTTTTTTATTTGCTTTTCTTTTTTTATTTTCTTTTTCTTT
TTTTATTTCGTTTTTCTTTTTTTATTTAGTTTTTCTTTTTTTTATTCTGT
TTTTCTTTTGTTATTTTGTTTTCTTTTTTTATTTTGCTTTTTTCCTTTTT
TTTTGTTTTTCTTTCGGCCACCGTAATTTCGTAGACTTTAAAGAGAACGA
TTTCTGATAGAAAGAAGTTGTTGCGCGGTAGATTCGCTGGAGATGGATGT
CTAAAATGGATATTCGAAAAGGGCTAATGAAAAATTATTGGCAAGAGATA
TTGACTTCAATTCAAATAAAAAACGGATGACAGATGTCACCATAAGGATA
AGGTATTCAGAAAAAGATTCCAAGAAGGGCGTGGTTAACATTTGACAGAG
GGAAATTCCCCCAGATGGGTATTCAACTTACTTTTATAAGTGAAATCTAC
TCATCTCGTCTGCCGACTCGGGAAATGACTGTTGATCCCAAACCAAAAAA
AACAGATGCAAGATGACGAGTGTAAAAACCATGCCTACCAAATAAGAAAG
TCCAAAAAAGCTTTTTTTTTGCACAACCTTAAAAGTCGATCTCTCCTATA
CTGAAATCATGGTGGTATAGCAGATAGATGAATGAATAAATAAATGAATG
TCAATAATTATTTATATTTTCTAGGTGAGCTAAGACGGGGATACAACGAT
GAACCAGCTAAAGGGAGATCTGTCATCACCTGGTATGAGATAGCTTTTCA
AGTTGGCCAAAACATTGGAGCTGGACTTCCTGTGCTTTTCACAACCGTGA
ATCTCAAAATAGGATTCTGGAAGCTTGACCAATTAAACATGATGAATTTC
ATTCTTTCCATATTTTGTCTGATCGTTGCCATCATCAGTTTTTTCAAGGC
TATAGATTTATCAAAAGAGCTAGACATTATAAAGAGTAAATATGTGGTCT
CGAAAGACGACAATGAAATGAACGAGAATGGCGTCGAAAAGACGAGCAAA
AATTTAATGAAATGGTCAGAGCTCTTTCAAATAGATATCATTTTGCTCTG
TCTTATATATAGTCTTGCACGATATGCAGTCGGAACATCAGTTTCTAGCC
TGACGATCTTACTTCCATTAAAGTACCATTGGTCATTGAATGACATGTTG
GTTTTACTCATGTGTACAAATTGTGCAACGTCATTGACCATTATAGCTCT
GGTAAAAATTGGCCTCCTCAAGAATCAAACTCGAAGTTTTTATTTGTACA
TCTTATCAATGGTTTTATGCTCGGTAATTGTAACATCGCTGATGCTCACA
GAAATTGGATTGTTAACAAGTTTCGCCAAACAAGCTGTGTTTTTTGCTTT
TTTAACTGCTTCAAAGAACTTTTTAGCCAGTCTAACTAAAATAACTAACA
CTGTATTGTTGCTTCAATTAGTAAAACCCCAAGATAGTGGTTTTATATTG
GGAGTAAGAACAGTTGCTGGTACTTCATTCAAAGGGTTGGCTTTTCTGTT
ATCATCAATTTCTTCTAAATATCCCGATTATCACTCACCCGGATTGGCGC
TTGTCATCCTGTTGACTGTTGTCCTCATCCTTTATAGAAGGAACGTACAT
CTTAAAAATTATAAAAATGAATAATATTTTCTTTTTGTAAACAGGAATAT
TTTGATAGCTCGTCTACTACAGAAGTGATTTCATGTAAAGTGTACCTTGG
GGTGGGGGGGGCACTCGATTTTTAAACGACAGCATGTGCCGCCAAAAAAA
TAGCTTTCAAAATTTCTCCCTTTGAAGTAAAATTTCTCTTGATATATTTG
TTTTGACGAAATAGATTATTTACATTTGAAAGAGGAAAGTTAACTTATTA
AACTATTCTTTGAACTTTTCAGCATAGGCTATAATCATAGAACTAAAGTC
AATCA Coding sequence (CDS) from alignment at sc0000103_pilon:877537..883641- >MSTRG.13203.1.p1 ID=MSTRG.13203.1.p1|Name=MSTRG.13203.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2730bp|location=Sequence derived from alignment at sc0000103_pilon:877537..883641- (Clytia hemisphaerica_ch_hm2_pilon)
GTGAGCTAAGACGGGGATACAACGATGAACCAGCTAAAGGGAGATCTGTC
ATCACCTGGTATGAGATAGCTTTTCAAGTTGGCCAAAACATTGGAGCTGG
ACTTCCTGTGCTTTTCACAACCGTGAATCTCAAAATAGGATTCTGGAAGC
TTGACCAATTAAACATGATGAATTTCATTCTTTCCATATTTTGTCTGATC
GTTGCCATCATCAGTTTTTTCAAGGCTATAGATTTATCAAAAGAGCTAGA
CATTATAAAGAGTAAATATGTGGTCTCGAAAGACGACAATGAAATGAACG
AGAATGGCGTCGAAAAGACGAGCAAAAATTTAATGAAATGGTCAGAGCTC
TTTCAAATAGATATCATTTTGCTCTGTCTTATATATAGTCTTGCACGATA
TGCAGTCGGAACATCAGTTTCTAGCCTGACGATCTTACTTCCATTAAAGT
ACCATTGGTCATTGAATGACATGTTGGTTTTACTCATGTGTACAAATTGT
GCAACGTCATTGACCATTATAGCTCTGGTAAAAATTGGCCTCCTCAAGAA
TCAAACTCGAAGTTTTTATTTGTACATCTTATCAATGGTTTTATGCTCGG
TAATTGTAACATCGCTGATGCTCACAGAAATTGGATTGTTAACAAGTTTC
GCCAAACAAGCTGTGTTTTTTGCTTTTTTAACTGCTTCAAAGAACTTTTT
AGCCAGTCTAACTAAAATAACTAACACTGTATTGTTGCTTCAATTAGTAA
AACCCCAAGATAGTGGTTTTATATTGGGAGTAAGAACAGTTGCTGGTACT
TCATTCAAAGGGTTGGCTTTTCTGTTATCATCAATTTCTTCTAAATATCC
CGATTATCACTCACCCGGATTGGCGCTTGTCATCCTGTTGACTGTTGTCC
TCATCCTTTATAGAAGGAACGTACATCTTAAAAATTATAAAAATGAATAA
ATGATGAAATACGATAAAGAGATGTATTTGAGCAAAGAGTATCAACATTG
GATCAAAAGTAGAACCATTTTTACATGGCTTGCATTCAGTATGATACTTC
TCTACGCAATGGAGCAACAATGTACCAAGTACTTTTTAATGTACTACATT
CAAGATCGATTTGGATTGACTGAACACAATGCTGTCATCTTTTACAGTAT
TTCGGAAGCTATCTATGCTATTGCACAAATCACTGGTGGTATTGTATTAG
GCAGATATTCAGATCGCACTCGTAATATGAAAAAAGTCGTTCTTATTGCA
ATGCTTGTTTCCTTTGTTGGTAATACCTTTTACGTGTGGCATGTTAACCT
TTTTCTTGTGGTTATTGGAAGGGCTTTGATGGGATTTACTGAATGTGTGA
ACACAGCTGTCGTAGGTGAGCTAAGACGGGGATACAACGATGAACCAGCT
AAAGGGAGATCTGTCATCACCTGGTATGAGATAGCTTTTCAAGTTGGCCA
AAACATTGGAGCTGGACTTCCTGTGCTTTTCACAACCGTGAATCTCAAAA
TAGGATTCTGGAAGCTTGACCAATTAAACATGATGAATTTCATTCTTTCC
ATATTTTGTCTGATCGTTGCCATCATCAGTTTTTTCAAGGCTATAGATTT
ATCAAAAGAGCTAGACATTATAAAGAGTAAATATGTGGTCTCGAAAGACG
ACAATGAAATGAACGAGAATGGCGTCGAAAAGACGAGCAAAAATTTAATG
AAATGGTCAGAGCTCTTTCAAATAGATATCATTTTGCTCTGTCTTATATA
TAGTCTTGCACGATATGCAGTCGGAACATCAGTTTCTAGCCTGACGATCT
TACTTCCATTAAAGTACCATTGGTCATTGAATGACATGTTGGTTTTACTC
ATGTGTACAAATTGTGCAACGTCATTGACCATTATAGCTCTGGTAAAAAT
TGGCCTCCTCAAGAATCAAACTCGAAGTTTTTATTTGTACATCTTATCAA
TGGTTTTATGCTCGGTAATTGTAACATCGCTGATGCTCACAGAAATTGGA
TTGTTAACAAGTTTCGCCAAACAAGCTGTGTTTTTTGCTTTTTTAACTGC
TTCAAAGAACTTTTTAGCCAGTCTAACTAAAATAACTAACACTGTATTGT
TGCTTCAATTAGTAAAACCCCAAGATAGTGGTTTTATATTGGGAGTAAGA
ACAGTTGCTGGTACTTCATTCAAAGGGTTGGCTTTTCTGTTATCATCAAT
TTCTTCTAAATATCCCGATTATCACTCACCCGGATTGGCGCTTGTCATCC
TGTTGACTGTTGTCCTCATCCTTTATAGAAGGAACGTACATCTTAAAAAT
TATAAAAATGAATAAATGATGAAATACGATAAAGAGATGTATTTGAGCAA
AGAGTATCAACATTGGATCAAAAGTAGAACCATTTTTACATGGCTTGCAT
TCAGTATGATACTTCTCTACGCAATGGAGCAACAATGTACCAAGTACTTT
TTAATGTACTACATTCAAGATCGATTTGGATTGACTGAACACAATGCTGT
CATCTTTTACAGTATTTCGGAAGCTATCTATGCTATTGCACAAATCACTG
GTGGTATTGTATTAGGCAGATATTCAGATCGCACTCGTAATATGAAAAAA
GTCGTTCTTATTGCAATGCTTGTTTCCTTTGTTGGTAATACCTTTTACGT
GTGGCATGTTAACCTTTTTCTTGTGGTTATTGGAAGGGCTTTGATGGGAT
TTACTGAATGTGTGAACACAGCTGTCGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000103_pilon | genome | sc0000103_pilon:877537..883641 - |
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