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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000116_pilon:442285..445052+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14108.2.p1 ID=MSTRG.14108.2.p1|Name=MSTRG.14108.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2768bp|location=Sequence derived from alignment at sc0000116_pilon:442285..445052+ (Clytia hemisphaerica_ch_hm2_pilon)
TTTTATAGGCTGTGCGTATCACCTCCGGATATGTTTTTACATAGGAGATG
CGTAACATGTATAAAATTCCCATATAAAGAGTACGTTGTAAGCCCAGTTT
AAATAATGGAATCTAATCTGGActtgaaataagattaaaattctCTGCTC
AGTCAATGGGTATTCAATGCCTGAATAgctttttgagattgaaatattta
atatagaagtcataaaatttgacataatttatgaaaatttgactTAACCT
AAACATTTATCCGCCTTTTTGGAACACGCTGTATACAAGAAAGTTTTGTT
TCTTATAGATCCTCATAGAACAAGCAAGAACATTTTTCACCAAAGATGAC
TTCAACAACAGCTTCACAAATGATGAAAACTGTCTCCATTACCATCGCAT
TGACATGTCTAATACTATCAACAGACATTAATGCAGCGTCCATCAACAGG
AACAAAATCATCCAACATGAGCAATGTTTATCAGTGTGTAAAACCAATTT
TCTAAACTGTGGAACGAACCttcaagaacaatttgaggtttgttattcat
tttattattttcttttctttgcttacttattttctaaagaattttccatc
gaaatttcttcCTATAAGGTTATTTACTTATACAGGCAGGGataacttca
aattagcctatcataggctgattagcctatcataggctatttagcctaTT
TCATACAGGCTAATTAGCccataatgaagaaaaattagatttttgagcca
aatactAATAGTCGCAtTCTATAAATCCTCAGATTAATCTCTAATCACTC
AATTAATGTATATTCCAAATATCATCCCTTAATCAGCTCCAGAATAGGAG
ATATTCAATTTTTTCTGACTGCGCATGCGCCGAGCATGCGCAGTATAAAA
ACTTCGACATTTTTCGCGGAAAAATTTGTTAAATTTGTTTTTTTTTTTTT
TTGCACACGGTACAAGATCAGAAAATTAGCCTATTATCAGTTATTTAGCC
TATCAGCTAGTTTTTTTTAAATACATCTTTTCTGGGAGCTGAACACAAAA
GATTTTTAAGTGGAGAATGTTCTTTGAAACATATAAGATTTGTTTTTAGT
GAAAAAAAGATGCGACTATTagtatttggctcaaaaatctaatttttctt
cattatggGCTAATTAGCCTGTATGAAAtaggctaaatagcctatgatag
gctaatcagctGATATTCCgagatgataggctaatttgaagctATCCCTG
CCTGTTATATTACTACTTTATGGGAGGAAATTTGGGCAGAAAActttttt
ctcagatttttcGGATGTTGctgaaatccgcaaaattaagtttccgccaa
aattaatcttttttttatccACCTTATTATCCAATCGCCGCAAAATCTGA
ATTATTATgttcaatctcaaaatgttttttattcaggccctgaaaacaag
ttttttttctcatattCAATATCGTTTTTGGGACAAAATAATCTTCATCC
GCCAACTTACTTATGACATCTCCAAAGGACCTAAATTTGTCgtcaattat
gacgtcattacgTAGTTTTTccctaatttctcaaaaatgacaaaacattt
tctttcattgATTATGTTCTTACATTGATTACGATCAATGGCTTGGTGGC
Aggggggcagggggccaggccccccccagcggagcccttttgagaagggg
cgcccaaaaataagggacgttaagaaggatttttcaggcgcccatatcga
aagattgataaatgaaaaaacaaaaatggcgcccctcatcacctcaaaaa
ctcaacattttctggctcgcttcgctcgcacactttcttttttgtgttca
taatgagcgtatagagaggggcgccaaaaacaaaaagtctttaaaaaggc
cgccatatttgccttggccaccccagagaaattttcccaccacgccactg
attACGATTATGTCTGGATCCTGAAACCTTGAGGAAAAAATCCATAAAGG
AATCCCTGAGATTAGGTGCCATTGAACTCAAATTTGGGATTTGTGCATCT
AAAAAATATACACGCCCCAACTCATACTTGAGATGGTAGGATGAGGCAGT
AACACAAGTCTTCAGTTTTAAAGAAGAGTGGACTCCACTCTGGGTATTAG
TggctctctgcttgatgctcagcagcTAAAGAGACAAATTCGAGAGGTTA
GTGGAGAAATCTTGGGAAAGGGGTGGTTCACtttcctaccttcgggtaga
tagctagagaaaagggagctTTAGGGccccccccTCGACTGTGGTTTCAA
ACTTTCTAACCTATTATGTAAAAATATTCATCTTCCAAACCCTTTTTCAA
ACCTTCTTTCGGTGTATGCAAAAACGAAATACATTTTTGATGTCTGTGAT
TGAAAGGATTATGAAGAAACTTCTGTGTTTTAAACAAATTCTTCACATTT
GTTTTTTCAGTGTATGCAAAAACGAAATAAATGTTTCGATGTCTGTGATG
GGAACGACGATGATGCGAAACGTGACGTCATAACAACAGGggaggaagaa
agtgaaagtgaattgGATTTACTTCGCACACTTTACCAAATCAAACGGCA
GTTGATGGCCCAAGAAGAATGGTAACGAGTACACGCATGTGCATATGACA
CAATAGACACAAAAGAccaataatttaaattttttaaatacgttattcca
tgatatgcaccattgtaatgtcttccacggaccaaAACATCTtgttggtt
gaaagtgacgtattgatt Coding sequence (CDS) from alignment at sc0000116_pilon:442285..445052+ >MSTRG.14108.2.p1 ID=MSTRG.14108.2.p1|Name=MSTRG.14108.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=714bp|location=Sequence derived from alignment at sc0000116_pilon:442285..445052+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACTTCAACAACAGCTTCACAAATGATGAAAACTGTCTCCATTACCAT
CGCATTGACATGTCTAATACTATCAACAGACATTAATGCAGCGTCCATCA
ACAGGAACAAAATCATCCAACATGAGCAATGTTTATCAGTGTGTAAAACC
AATTTTCTAAACTGTGGAACGAACCttcaagaacaatttgagTGTATGCA
AAAACGAAATAAATGTTTCGATGTCTGTGATGGGAACGACGATGATGCGA
AACGTGACGTCATAACAACAGGggaggaagaaagtgaaagtgaattgGAT
TTACTTCGCACACTTTACCAAATCAAACGGCAGTTGATGGCCCAAGAAGA
ATGGTAAATGACTTCAACAACAGCTTCACAAATGATGAAAACTGTCTCCA
TTACCATCGCATTGACATGTCTAATACTATCAACAGACATTAATGCAGCG
TCCATCAACAGGAACAAAATCATCCAACATGAGCAATGTTTATCAGTGTG
TAAAACCAATTTTCTAAACTGTGGAACGAACCttcaagaacaatttgagT
GTATGCAAAAACGAAATAAATGTTTCGATGTCTGTGATGGGAACGACGAT
GATGCGAAACGTGACGTCATAACAACAGGggaggaagaaagtgaaagtga
attgGATTTACTTCGCACACTTTACCAAATCAAACGGCAGTTGATGGCCC
AAGAAGAATGGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000116_pilon | genome | sc0000116_pilon:442285..445052 + |
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