MSTRG.14799.1.p2 (mRNA) -

Overview
NameMSTRG.14799.1.p2
Unique NameMSTRG.14799.1.p2
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000125_pilon:865899..870724-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.14799.1.p2 ID=MSTRG.14799.1.p2|Name=MSTRG.14799.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4826bp|location=Sequence derived from alignment at sc0000125_pilon:865899..870724- (Clytia hemisphaerica_ch_hm2_pilon)
AAAAGATTTTTGATAATTTAACTAAGGAAAAGTTTAAGGAAAAGTCAAAC
CTTTTGAAACCACTTAGAAAAAGAAGATTATATGGCAAAAATATCCAGAA
CATTTAATAACAAAACAGAACGTACATCTTCTACAGGAATAAAAAAATTA
AAAGGGAATTATAATTTTAATAGGGTTTCTTCAAACTCTTCTTTGGCCTT
CTTTAGTTGACTTTTGGACCAGTAGGAAAAAATTTAGTAATAATGGATGA
CCGTTTTGATAATTTAAACAATCATTTTGATTATGAAGAACACGACAATG
AAAGTGATGACGATGGCCCTGCTGTCAGGTAATTTCGTTATTTGAATTGG
GAGTTTTGTGGTTGATAAACATCAATACATCTGATTCTTTAATATGTGTA
AGTGAAAGGATATATAGATAGCGTTTACTTTTGAATACCATCCAAGAGCT
CTAAGAACTAACCTTTAGCAAAGATTTTTCTCTGGGAATTTTATAAGTAA
GGACTTCTTGATTTTCTTATTTTCTGCTTTTAGCTCAGACGAGGAACAAA
ATGCAGATATTGATTATTTTTTAACCATTGAAGCTGGTAAAGATATCATC
AAAGAAAAAGGTGCATATCTTGTATAATTCTTTTTTGATTATCTTATTAG
TAAATTTCTGAGGTGGGTTCATTGGTTTTTTCGCTCTCAAAATAGATCAC
CCCAATAGGTTCGATAAAAATCAAGATTGCTAATCATATTCTTGTAATAT
TCTTTCTTACAATAGATTTTCAAGGTTTTTGAATTTTGAAGTTTGTGCGT
AATTTTTCAGGAAATTTTCCATCATCTTCAGCAAGTGGTTCACAACTGGA
CGAGAAGATAGTGTTGGGTCAAACAGTAAAAAAAGATGATCTTTTTTATG
ATGCAGATATAGATAAACAAAATCAAGAATGGATGGATAGAAAGAGAAAG
AAAAATTCTTCATCAGGTCTGTTTTTATTAGACATTCAAACTGATTCATA
TAAAGGTTTTGGCTTGTTCATTTATGCTTATAATTATACAAGTGGAAATT
CTCAAATTTCCCCATCATAGAATCGATTGAATTGTTTGTTTTGCAATGAT
GCGCTGACCATTATTGTTTGCAATTAATTTTGTTTAATTTTGTTAGTTTT
GTTAGATTAATCTTTTTCACAAACATTATACTGAGATTTATTTGATTGAT
TTCCTGACAGGTGTTGAGACCTCCTCTGCTCATAAAGCTCCAAAAAGTGA
CGCCATTTTAAGTTGTCCTGGATGTATGGTAACCGTTTGTATTGATTGCC
AGAGGTATGTTCATTATAATATCTTACTTAGTTTGTTTAGATTATATCAA
AATTTTTCTATAATAAGTTTTTCAATTTAGGCTTTCTACTTCAGGCAATT
TAAAAAGACCAACAAGTAAAAGCTAAAGAATCAATCTCTATTTTCGAAAA
TTCAGAAAATGTCCAACCTATTGGGAAATAGACTTACAGGCCAACAGTTA
CCACTTACTATACAATTGTTTTTTAAGGCATGACATCTACAAGACACAAT
TTCGAGCCATGTTTGTTATGAACTGTTTTGTGGTCATTGATGAAGTACTC
AAATACGAAACTAAAAATAAATCTAAAAAGAGAAGGAAAAAAGAAGGGCC
AGGGAAGTTGGTCCCAGTTGAAAAAGACAGTGAAGAAATTTTAAATAAGG
ACCTTGAGATTTATAATCCCGTGAAATGTGATTGTTGTCAGACTGAAGTT
GCTGTTTACGATAAAAATGAAATCTATCATTTCCACAATGTTCTTGAAAG
CTTGTCTTGACACTTTAGAAGATCTTGTCGAATTTGAAACTTATCGACCT
CATGGAGAATTTTGATGGATAGATTTTTGTCAATTTTTTATAGTTCATAA
ATTATTTTGTTTTCACTTTAAGATGTAAATATTTATTTAGAGATAAACAT
AAAAGATGAATTAAATAACCAAGGTTTTGTTGAAAACTTTCTTTTTGTCC
TTATATACACTGATGTTTCTTTTCTTTATAGTAAATAAATCACTAAAAAA
GGATCCAGCTACTTATTTTTGAGGAATGCACCAGCAAGTTCTTCCTGACA
CTAAAGCAAATGCAGGTATAGATATTGTTCATTATTTTTTCAAGGCCACT
GCTCAATTGACAGCCTTTTTTATGTGAACCAAATGTTTGACATCCCTTTT
TATGTGAACCAAAACATTAGAATCAAAAATTTATATGTCAAATTTTAAGT
TTGCCTTTTAGTCATAGCTTCACTAAAATACCACTGTCCTAATAGCCTTT
TATGAATTGATATACTGATATTGTACGCAATCCCTTGTTTACTCTGTAAG
AATCGTGCTTACTGTCCATTATCTTGTGTGATGCTATGGGTGCTTGCCGT
TTGCAATTAAATAATGAAAAAAAACTTTTCACTTGATTGAAGACACAGTT
TGTAATTAAAGCTCTTATGCCTTTTCTGTTGCTAACCTGCTTTCACCTCA
ATTTCATTATTCTTTCTAATTCCAGTTGATTATTTTTCTCTAGTGCAAAA
CCCTGTATCCATTCTCCCTGCAAATGGGCATAACAAACGTACTGAATATA
AAATTGCAACCAAACTGAAAGTGGCAGAAAAGCTAATCTCAACTGAAACA
TTACCTCAATCAATGAAAGACAATCTTGATCTAGTACGTAATGTTGAAGT
CCAATCAACTGAAAAGATTTCGTTCATCCATAAAGCACCCAAAAGAAGAA
CACCAAAGCCGCAAAAAGAAATAGTAGTAGTGTCTGAACTCACTAGCAAG
GATAGACATCGTTACAAGGAAGCTGATCGCAGAATCAAAGAAAAGTCAGA
TTTTGACAGTTTAATGACTGTTCTTGAGCTGGACAATAAAATTAACAAGG
TGAATGCACAAAGTTTTTTTTCTTGATGAAAGGCCTGATATAACATAATA
AGTATACTCTAGTTTTATTTCTACATTTCATTCAGAATGTTGTTATGAAA
ATATCTTATTGTACTTTTCCTTATTTGATTTCTCCCAACTGCTGAAAAAT
ATCTTTTTAGAAATTACTCCTTTCTCATTTTTAGAGTGATGTATTGAATG
TAGCCAGAAACGTGATCAACACCGAAACATCACATCGCAATTTCTTGGTG
ACTGAACTGAGAAAACTAATAGACTTTAATATTCTTCCTAAATTACAAAA
ACTTGCTGTTAGCAAGTCAGGGGATGGCACATCATGCCATTGTCATGATA
ATGCAAATGGTTATTTAAAAGATGTTTTAAAGCATTTTAATGAGAAGTTC
AATAAACAAATTGATTCAGCGTTAGTAAATGCATTACTAAAATGCATTAC
TAATACTGTTACGAGATTTGTGCTATCAGTGCTTACGCTTAAAATCAATG
AGTCTACAGCATTATATTATCAAAACCCAAGTTTTAAAATACACGTCTGC
ACCAGAAAGTGTTTCAGCCGTTATGCTCTCACCAGATGACAATCCAACCA
TAGTTTTTTTACCAGATAAAGCAACAAGCTCTCATGCTCCCATCAAAGGT
GCTGTATCGGAAAGCTCTACTAGCACGAGGGTTCCCTCAGAAGTTGCTGT
ACCTAATAACTCTCCTTCAAGAACGGGAATGTTTTTCAAAAATGCCCTTT
CCATAACACCAACAACTCCTCAAATAGCGGCAATAGCAGCACCACTCTAT
CCACAGCATTCACATCATTCACATACAAATACGATCTTACATCCTGTACA
GCCACCACCTCGGCCACAAACACATATAATTCTACAGCCTATACAACCGC
AAGCAAATATGGTACAACCTGTTACTTTTCAACCAAATAAAAGGAAACGA
ATTGATAATAAATTTTTATACGTTCCAAACCAGCAGCTCCCTTATCAAAG
AAATCCTTATTTGACGCCAAGTACATTACAAGTTTTGGAAGCTCAAGCAC
CTTCCAAGTCAGAATCCATTGAAAGATATGCAGACGAAATTGAAAATGGA
ATCAATATTGACGATGGACTTGCAGCTTTGGTTTGATCTGTTTTTATATA
TACATCAGCAATTGAATTCCTTCTTACACCAATATTGCAAACAATGTGCA
ATCAATTTAAAAAGATTTTGAGTAGGGTTCAAAACTACTTTCAACCTTGT
CTTTTTTTTGATTTTTGAAATTGGCTTGCTCATACCTAATCAGACAAGAC
GCCATAACTATAGGTACAACATGCAAGTAAATTAAAAAAAAAAATACCTA
GGCAAGACAAATTTAATTTATTGTTCTACAAGAAAACCTTTAGAAAAAAT
ATGGATCAGTCGGTCGGTGTAATAGAAATCTATTTCATAAAAGCTAGGGT
CGGAAGGTCAACGTCTGAAAAAAATTGGGACATTTTCAAAGTCCCAAATT
TTGCATAAGTGAGCTTTTTGTTTTCTCAAGGTTTGATACTTCATAATCAA
CTCTGGGGTCAATTATGGAGCATGGCTGTAAGACCGTTTCAATTATTAAA
ATTTAATTTCTCAGAATTATAATAATGACATTATGATATGATTTGTCCTG
GTCGCCCAGTACAATGCACTTGGACCAGTATTGCGTACTTAGTCTGTTGC
GCAGTATTTTTGTGGTGGGTGGGTTTTTTCAGTTTTATTCTATTTTGAGT
TTATCAAATTTTGATTCTCATGCATATTTTTTATAAATTATTTTTATTTG
AATTTTATTTATATTAGGCAAATGAATAATTAGGATTAGATTTTGAAAAT
TTAAAATTATGATCATAAAATATAAAATTAAGTATGGATTAAGAATACAT
ATAGTATAGAGTTTGTTTCTCGTCTG

Coding sequence (CDS) from alignment at sc0000125_pilon:865899..870724-

>MSTRG.14799.1.p2 ID=MSTRG.14799.1.p2|Name=MSTRG.14799.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3480bp|location=Sequence derived from alignment at sc0000125_pilon:865899..870724- (Clytia hemisphaerica_ch_hm2_pilon)
GCATGACATCTACAAGACACAATTTCGAGCCATGTTTGTTATGAACTGTT
TTGTGGTCATTGATGAAGTACTCAAATACGAAACTAAAAATAAATCTAAA
AAGAGAAGGAAAAAAGAAGGGCCAGGGAAGTTGGTCCCAGTTGAAAAAGA
CAGTGAAGAAATTTTAAATAAGGACCTTGAGATTTATAATCCCGTGAAAT
GTGATTGTTGTCAGACTGAAGTTGCTGTTTACGATAAAAATGAAATCTAT
CATTTCCACAATGTTCTTGAAAGCTTGTCTTGAGTGTTGAGACCTCCTCT
GCTCATAAAGCTCCAAAAAGTGACGCCATTTTAAGTTGTCCTGGATGTAT
GGTAACCGTTTGTATTGATTGCCAGAGGAAATTTTCCATCATCTTCAGCA
AGTGGTTCACAACTGGACGAGAAGATAGTGTTGGGTCAAACAGTAAAAAA
AGATGATCTTTTTTATGATGCAGATATAGATAAACAAAATCAAGAATGGA
TGGATAGAAAGAGAAAGAAAAATTCTTCATCAGCTCAGACGAGGAACAAA
ATGCAGATATTGATTATTTTTTAACCATTGAAGCTGGTAAAGATATCATC
AAAGAAAAAGATGGATGACCGTTTTGATAATTTAAACAATCATTTTGATT
ATGAAGAACACGACAATGAAAGTGATGACGATGGCCCTGCTGTCAGGCAT
GACATCTACAAGACACAATTTCGAGCCATGTTTGTTATGAACTGTTTTGT
GGTCATTGATGAAGTACTCAAATACGAAACTAAAAATAAATCTAAAAAGA
GAAGGAAAAAAGAAGGGCCAGGGAAGTTGGTCCCAGTTGAAAAAGACAGT
GAAGAAATTTTAAATAAGGACCTTGAGATTTATAATCCCGTGAAATGTGA
TTGTTGTCAGACTGAAGTTGCTGTTTACGATAAAAATGAAATCTATCATT
TCCACAATGTTCTTGAAAGCTTGTCTTGAGTGTTGAGACCTCCTCTGCTC
ATAAAGCTCCAAAAAGTGACGCCATTTTAAGTTGTCCTGGATGTATGGTA
ACCGTTTGTATTGATTGCCAGAGGAAATTTTCCATCATCTTCAGCAAGTG
GTTCACAACTGGACGAGAAGATAGTGTTGGGTCAAACAGTAAAAAAAGAT
GATCTTTTTTATGATGCAGATATAGATAAACAAAATCAAGAATGGATGGA
TAGAAAGAGAAAGAAAAATTCTTCATCAGCTCAGACGAGGAACAAAATGC
AGATATTGATTATTTTTTAACCATTGAAGCTGGTAAAGATATCATCAAAG
AAAAAGATGGATGACCGTTTTGATAATTTAAACAATCATTTTGATTATGA
AGAACACGACAATGAAAGTGATGACGATGGCCCTGCTGTCAGGCATGACA
TCTACAAGACACAATTTCGAGCCATGTTTGTTATGAACTGTTTTGTGGTC
ATTGATGAAGTACTCAAATACGAAACTAAAAATAAATCTAAAAAGAGAAG
GAAAAAAGAAGGGCCAGGGAAGTTGGTCCCAGTTGAAAAAGACAGTGAAG
AAATTTTAAATAAGGACCTTGAGATTTATAATCCCGTGAAATGTGATTGT
TGTCAGACTGAAGTTGCTGTTTACGATAAAAATGAAATCTATCATTTCCA
CAATGTTCTTGAAAGCTTGTCTTGAGTGTTGAGACCTCCTCTGCTCATAA
AGCTCCAAAAAGTGACGCCATTTTAAGTTGTCCTGGATGTATGGTAACCG
TTTGTATTGATTGCCAGAGGAAATTTTCCATCATCTTCAGCAAGTGGTTC
ACAACTGGACGAGAAGATAGTGTTGGGTCAAACAGTAAAAAAAGATGATC
TTTTTTATGATGCAGATATAGATAAACAAAATCAAGAATGGATGGATAGA
AAGAGAAAGAAAAATTCTTCATCAGCTCAGACGAGGAACAAAATGCAGAT
ATTGATTATTTTTTAACCATTGAAGCTGGTAAAGATATCATCAAAGAAAA
AGATGGATGACCGTTTTGATAATTTAAACAATCATTTTGATTATGAAGAA
CACGACAATGAAAGTGATGACGATGGCCCTGCTGTCAGGCATGACATCTA
CAAGACACAATTTCGAGCCATGTTTGTTATGAACTGTTTTGTGGTCATTG
ATGAAGTACTCAAATACGAAACTAAAAATAAATCTAAAAAGAGAAGGAAA
AAAGAAGGGCCAGGGAAGTTGGTCCCAGTTGAAAAAGACAGTGAAGAAAT
TTTAAATAAGGACCTTGAGATTTATAATCCCGTGAAATGTGATTGTTGTC
AGACTGAAGTTGCTGTTTACGATAAAAATGAAATCTATCATTTCCACAAT
GTTCTTGAAAGCTTGTCTTGAGTGTTGAGACCTCCTCTGCTCATAAAGCT
CCAAAAAGTGACGCCATTTTAAGTTGTCCTGGATGTATGGTAACCGTTTG
TATTGATTGCCAGAGGAAATTTTCCATCATCTTCAGCAAGTGGTTCACAA
CTGGACGAGAAGATAGTGTTGGGTCAAACAGTAAAAAAAGATGATCTTTT
TTATGATGCAGATATAGATAAACAAAATCAAGAATGGATGGATAGAAAGA
GAAAGAAAAATTCTTCATCAGCTCAGACGAGGAACAAAATGCAGATATTG
ATTATTTTTTAACCATTGAAGCTGGTAAAGATATCATCAAAGAAAAAGAT
GGATGACCGTTTTGATAATTTAAACAATCATTTTGATTATGAAGAACACG
ACAATGAAAGTGATGACGATGGCCCTGCTGTCAGGCATGACATCTACAAG
ACACAATTTCGAGCCATGTTTGTTATGAACTGTTTTGTGGTCATTGATGA
AGTACTCAAATACGAAACTAAAAATAAATCTAAAAAGAGAAGGAAAAAAG
AAGGGCCAGGGAAGTTGGTCCCAGTTGAAAAAGACAGTGAAGAAATTTTA
AATAAGGACCTTGAGATTTATAATCCCGTGAAATGTGATTGTTGTCAGAC
TGAAGTTGCTGTTTACGATAAAAATGAAATCTATCATTTCCACAATGTTC
TTGAAAGCTTGTCTTGAGTGTTGAGACCTCCTCTGCTCATAAAGCTCCAA
AAAGTGACGCCATTTTAAGTTGTCCTGGATGTATGGTAACCGTTTGTATT
GATTGCCAGAGGAAATTTTCCATCATCTTCAGCAAGTGGTTCACAACTGG
ACGAGAAGATAGTGTTGGGTCAAACAGTAAAAAAAGATGATCTTTTTTAT
GATGCAGATATAGATAAACAAAATCAAGAATGGATGGATAGAAAGAGAAA
GAAAAATTCTTCATCAGCTCAGACGAGGAACAAAATGCAGATATTGATTA
TTTTTTAACCATTGAAGCTGGTAAAGATATCATCAAAGAAAAAGATGGAT
GACCGTTTTGATAATTTAAACAATCATTTTGATTATGAAGAACACGACAA
TGAAAGTGATGACGATGGCCCTGCTGTCAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.14799MSTRG.14799Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14799.1.p2MSTRG.14799.1.p2-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14799.1.p2.exon7MSTRG.14799.1.p2.exon7Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14799.1.p2.exon6MSTRG.14799.1.p2.exon6Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14799.1.p2.exon5MSTRG.14799.1.p2.exon5Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14799.1.p2.exon4MSTRG.14799.1.p2.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14799.1.p2.exon3MSTRG.14799.1.p2.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14799.1.p2.exon2MSTRG.14799.1.p2.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14799.1.p2.exon1MSTRG.14799.1.p2.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000125_pilongenomesc0000125_pilon:865899..870724 -