XLOC_013454 (gene) - C. hemisphaerica

Overview
NameXLOC_013454
Unique NameXLOC_013454
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000465:129118..133387-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_013454 ID=XLOC_013454|Name=XLOC_013454|organism=Clytia hemisphaerica|type=gene|length=4270bp|location=Sequence derived from alignment at sc0000465:129118..133387- (Clytia hemisphaerica)
ATTTAGAGAAATTAAAATAAAGATGACTTCCATTAACGAAACAGTCAAGC
TAGGAGATGGAAACAAAATTCCATTGCTTGGTTTTGGATGCCTTGATATT
GGCGAAAGAGGTGAAGAAACAGGCTATAATGCAGTTTTAACAGCACTTAA
AGCAGGCTATCGGCTCGTTGATACTGCTGCAGCGTATGGCAATGAAGAGT
CTGTCGGCAAAGCTTTGAAAGACGGTTCTATAAAACGTGAAGAGATGTTC
GTTGTCACTAAACTTCATCCTGGCAAACATGGTTTTGAATCTGCCAAGGA
GAGTTTGGAGGATAGCCTGCGAAAACTTGGTTTAGAATATGTTGATTTAT
TCTTGATACATACTCCAGTCNGCAAACATGGTTTTGAATCTGTCAAGGAG
AGTTTGGAGGATAGCCTGCGAAAACTTGGTTTAGAATATGTTGATTTATT
CTTGATACATACTCCAGTCCCAGGGAGGGTTTTGGAGTCCTGGAAAAGTC
TGATTGAATTGAAGAAAGAAGGCAAAACTAAAAGCATTGGAGTGTCCAAT
TTTAATGGCGATCATATTCAGGCCATTTTGGATGCTGGTTTGGAAAAACC
TGCAATCAACCAGTTTGAACTTCACCCAGTGTTTAGAAGGGTAAGAGAAT
CGTATTATTTATGTACTTATTCAAATAAACAATTTTTTTTCAAGTTAGTT
GAGTTGAATTTGAAGAACAATCAACAACGAGTTAAAACCTTTAACTTGAA
CTTCAAAATCAACTTAAAATATTTCTAAAAAATTGGTATTATTATTAAAC
AAAAGTTGACGCTCTCTTATTCGAATCAGATTTCCATCGGATAAGGGAGC
GTATCGATTAGTAGAGCGTTGTTTACAACGACTTCCAAATATCGTAACTT
GGTCTAATGTCGACATCCCCGGTCTAATTTTGACATCCTTCTTTAAAGAT
AAGAATAATTGGAAGGTCAGAATCGCTGATGGAAACTTTTTTCTTTGCTT
AGTGATCAGAGAGGAAAATATGTTTTGTCTATAAGTAATCTCGACTTTCC
TATTACTCCTATCTCTAAAGAAGGGTGTCGGAATTAGAAGAGGGATGTCG
ACATTAGACCAACTTACGCTACGGTAATGGAGCGCCTACTGTATATAGAG
TTTGAAATTGTTTACCAATAACCAAATGAATTACGACATGGAAATGTTTT
TGTTCCAGGATGAAGTGGTGAAATATTGCCGTGATAACGGAATCACCATA
ATGGCATACTGTCCATTAGCCCGTGGACGTTTCTTGAAGCCTGGAGATTG
CCCGTTAATCGAAGAAATTGCTACAAAATTGAACAAGAGTGTTTCCAAGA
TTTTCTTACACTGGGCTTTGCAGAACCAATTTGTGATTATACCAAAATCG
GCAAATGTGGGTCGCATAAGGGATAATTCTGAACTCTTCGACTTTGAGAT
TTCTAAGAAGGATATGACCCGCATTGCAAACATGGATATGGATATTTCGG
TATGCGAGGCCAGTGCTGTTATGAAATTTCCGTGGAATCATATTAAGGAC
TTTGATAAACCAGGAGAAGTTGATATTTAAGATTTTATGATGAATTTTGT
GTTCTTGACCCAGAGGCCATCTAGAAATCATATTCAGGACTTTGATAAAC
CAGGAGAATACATAATGGTTTGAATAGTAATATTGTAAAATTTACAGGAT
AAGAAAGAAGTTTTATTATGAATTTTTAGTTTGAGGGCTACTTAGACTAC
ACAATATATTGGCGAACAATATTCGACAATATGGTTTGCGGACCGTAATG
TACGTTCTGGGTGATACAGTAAACTGTTATCAGATATAATAACATCTTAC
TTCGGCTGATTCATCGTCTATGTATTCATCAGATTCCTTTTCTTAAAAGT
GATTATTGGTCGTAAAAACAGTTTCTCAAAATCTGAAGCGTGGATAAAAA
TATCTTTATAAGGGTATATTTTCAGTCTGCCAAAGAAGACTCTGTGATTG
TCATTTCATCTATTGTTTTTGTTTTGTGTATACATGTTACCTTGGTATGC
TTGATTCATTTTTCCTACATTGCAAGAAAGTCTCGATATTCTATTTAAAT
TAATAAATTCTAGTATTTTCTAAGAAAACACTTGTTTGCTACAAAAGTGC
AAAGTATGCATCATGGAAATATTATTGCAAAATTCTATCTTTCTCAATTC
AAGTGAGCATCGTGCCCTTGTATTTGTAAGCAAGACCTCAAAAATTTTTT
GCGGATCATTTTTCAAGATTAGACAATTAAATCACGAGTTTTTAAGAAAG
TAAAAGAACAATAAGAATTGGAGCGTGAAAAAGATTTCAATAGTAAGGAT
TTAGGACAAAGCATTTCGAGGTTCACTAAGCTCTGTAGATTTAATCTGTA
GACAAAATACCTGAAATCATCAGACTATTAACTACTTTTGAATCTTAAAT
TTAGAGAAAATAAAATAAAGATGACTTCAGTAAACGATACAATCGATTTA
GGAGATGGAAATAAAATTCCATTGCTTGGTTTTGGATGCTTTGATATTGG
CAAAGCAGATGAAGAAACAGGCTACAATGCAGTTTTAACAGCACTCAAAG
CAGGCTATCGACTCTTTGATACTGCTGCTGTGTATGGAAATGAAGAGTCT
GTCGGCAAAGCTTTGAAAGACGGTTCTATAAAACGTGAAGAGATGTTTGT
TGTAACTAAACTTCATTCTGGCAAACATGGTTTTGAATCTGCCAAGGAGA
GTTTGGAGGATAGCTTGAGAAAACTTGGTTTAGAATATGTTGATTTATTC
TTGATACATACTCCGGTGCCAGGGAAAGTTTTGGAGTCCTGGAAAAGTCT
GATTGAATTGAAGAAAGAAGGCAAAACGAAAAGTATTGGAGTTTCCAATT
TTAATGGTGATCATATTCAGGCCATTTTGGATGCTGGTTTGGAAAAACCT
GCAATCAACCAGTTTGAACTTCACCCAGTCTTTAGAAGGGTAAGAGAATC
GTCTTATTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCGTTTATTCCAAGTTAGTCG
AGTTGAATTTGAAGAACAATCAACAACAAGTTAAAACTTTTTGACTTGAA
CTTCACAAAACCAATTTGAAACATTATTGGTATCATTATCAAACTACAGT
TGACGCTCTCTATTTCGATTTTCAGTAAAAATTAGATTTCCATCGAATAA
GGGAGCGTACTGATTAGTAGAGCGTTGTTTATGAGAGTTTCTTACTGACG
GTGGCTTTCATTATTACCGAGTTCATGTATGTGTGTTTTCCTGTGACGGA
GACGGTAAGGTTCTAATTTGACTAGATCCTGATCAGCTGAACACGACGGT
AAATCAGCACTTTTACTGTCCTTAATTCTGCGGGTCAGAAGTGCGGGTCA
TTCCTCTCTACCGTCCTCAAAAGAGCAAATACATAAACGCACTATTATTG
AATAATGGAGTGCCTACTGAATCTAGAGTTTGAAATTGTTTACCAATAAC
CAAATAAATTACCAAATGGGAATGTTTTTGTTTCAGGATGAAGTGGTGAA
ATATTGCCGTGATAACGGAATCACAATAATGGCGTACTGTCCGTTAGCCC
GTGGACGTTTCTTGAAGTCTGGAGATTGCCCATTAATCGAAGAAATTGCT
ACAAAATTGAACAAGAGTGTTTCCAAGATTTTCTTACGCTGGGCTTTGCA
GAACCAATTTGTGATTATACCAAAATCGGCAAATGCGGGTCGCATACGGG
ATAATTATGAACTGTTCGACTTTGAGATTTCTGAAGAGGATATGACCCGC
ATTTCAACCATGGATATGGATATTTCGGTATGTAAGGCCAGTGATGTTAT
GAAATTTCCGTGGAATCATATTAAGGACTTTGATAAACCAGGAGAATATA
AAATGGTTTGATTAGTTGTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00023947TCONS_00023947Clytia hemisphaericatranscript
TCONS_00023946TCONS_00023946Clytia hemisphaericatranscript
TCONS_00023945TCONS_00023945Clytia hemisphaericatranscript
TCONS_00023944TCONS_00023944Clytia hemisphaericatranscript
TCONS_00023943TCONS_00023943Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00023946-proteinTCONS_00023946-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000465supercontigsc0000465:129118..133387 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.42	4.76	3.62	3.85	0.61	0.64	2.63	2.44	4.65	7.01	3.29	2.61	18.13	15.6	19.91	38.67	25.39	11.23	0.25	0.53	7.73	8.96	11	10.79	2.21	2.81	50.23	30.24	104.5	66.01