XLOC_013246 (gene) - C. hemisphaerica

Overview
NameXLOC_013246
Unique NameXLOC_013246
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000456:210232..220307+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_013246 ID=XLOC_013246|Name=XLOC_013246|organism=Clytia hemisphaerica|type=gene|length=10076bp|location=Sequence derived from alignment at sc0000456:210232..220307+ (Clytia hemisphaerica)
ttaaaatgttctcaaacgGCTcgggaataaaaaaataaatattctttaaa aaagatGGCGGAGGCAACAGcgttttcaacaaaattttcttctgaaatcg aaagtgacgaaagaaatatttctaaaatggACGAGGATTCTGACAAAGTC ACAACAATTGAAGAAACAATGACAaaaggtttcatttttattcttgTTAA AGCCAACCTATACATCTTGCAGAACGTCCACGAGCTCCTGCCTCGTGCCT CGGAccacgctaaaaatggtagacctATCGATATCTGAgacaattcaatt caattttttttttcaattcaaaacatatatttacccgAAGGAAGGGACAC CAAGTTTAGAAACCTAATTACAAATGGTGCAACCTAAGACAGACATTTGG CTAaagcttcagatgcatccggctggacttagaatttttttcaagttgaa taGTGACCAAAAAGGGGGTCTCGAACCGGGAACCTATAGGTTTCGAAACC AATGCCCTATCCACTAGGCCAAGCCGGCTGCCGAAAATTCGTTATTTAGG GTTACTTATACGAAGGTCTTTGTACTATATATAAATAAGTCTGACTTACa agttaggctaactgttatgatTGCCATTACTCtgatagcaactccagaag atttttcaaattttaatttttttttcaaaatctatcatatcttgtagagc tttgaaaaagaaagaaaatgaggggtcataggcctccagaggataagtgg ttgtaaagatattcaaattttagtgtcaaaaaNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNTAGCATACATAGAAGAAAAgttagaagggttc aaagttcacggaaaaatgaaacatttggtttgacgtcaacgatagttgcg tgacttctggagtcgctaactCTGAAGAAGCCACCACACGTGTGCACCGC CGGGTGGGTGCACCGCCGGCCGGGTGAGGGGTTAGGGATGTGCACGGCAA AGCCACCCTGGTGCAAATCCCTAACTCTACCCTATGCTACGCGCTATGCG CGTCGCGTGGTATATGCGCGTGCTCCgccggatgcatctgaagcatTAGC CGATTCTTGAGACAGATTATTTCCAGacgacaatctcaatcgaacggaat cgacgattgaaccagtcaaaccaaattgaacgcaatcgaccgattgaaat tcgattgtcaaacgtcTAAATACATGCGTTTCCTGTAACTTTATATGAAC AGTTAGGGCTATACTGTTTAGGCAAACACGACGGTCTATTGCATTactaa ttactccacacttCAGTGGATGCAAGTAAAACAAGCAGGAAATTGCCTAT AAAAAAGTTCTGTTTTGTGCGAAACTTAACACGCAACGTCTTATAAAGTA TTACCTCAAGTATTAGGGTTTTATATCTGTAATACGGAGCAGATAATTTC CTGCCTGAATGGATGGAGTAATTTAATATGTGGAACTGAGTCAATAGGTT GTCACCTTCTCCCAAACGACTATTTCACACTGCCCTTCTTTTCGGCCCAA ATGGCATTTCAGTGCATTGCATGAGGGGCAACTGTCAAATCTCATCCTTT ATAATacctcttttctttttatattgaTCCGTAATCATAAGGCATAGGCT TTTTTCTCATCTACAGTTTTCTGACGAAGGAAGGATTTCAATGAGAGTTA GGCTGGGATCACAATAACTTGGGTTGGCTTTGTCCAACTGACTGataatt tttcttacttttctgAATCGTTTGAGTCAAGAAATCCAAAATTGTCAGAT TTTTATCCAATTTCATACTGTGCTTCACCGATCATCTTTAATTTGTATAT TGATTGCACAAGAATTCCTCCCAttgaagaattatattttgacttttaaa attgcaaaatataaATTATAAAAGCTCCCAGCCATCAGTTATTTAGTTTA TAAATGAGCTTgtgctttcattttcatttgcctTCCTTTTTCACAGTATC AGCCTTTTCCATAAATTATAGCCTGCACATTGAAAAAAGTTGACTTTAAA CCAGAAACAGTGAAATCTTTTATgatctggatatccaggctctTTCTGTC ATACTGATCTCACTTTTCATAAATCAGAGTTGGAAGACAATGATTGTTAA ATGTCCTAATATTATCCATGTATAAACACCAATATAAGCGAAGAAGATAT TCTTTACAGTCACTGTGCCAGACTTCCCAAGTAATTTGGAAGCATTTTTT GCACTTCAAATCACTGGTCAATAAGTTGAAATTTGACACTTtcaaaatta ttacttttaGCATTATTATGTATCCATGGAAAAGCTTCACTAATGagaaa gcttcaaaaaatatgatatattcttttgtttatttatttttgtgaaaaat tatcaGGTCGattcactttctttttttttctattgtaaTTTCAGCTCCTT TGGCTTGGATTCATAATCAAATTGCAAATAATGCCAACCCTCGAGATATA CTCAGTCAGCTAGTGCCTGAGTTGAACATTGTGAGTTAAAGATTTATTTG AATCAGCTAAGATCTATATTATGAATTCtaatgtcaattttagacttttt gatttaaagaatttttttctctcaaaatgtaACTTAGATTTAGTGTCCTA CATTTCCATCTTCAAAAAGTATTCTCAGCTTTCTTGAATGCATACGGTTT TAATTTTGTTGTACGAATGCTTCTTCCAGCCGGACCATGTAGACGACCTT TCATTGTGGAGACTGGCTTTGGAAATTTTATCAGAACCTGCACCACGTCA ACGTCTTCAAGAAGTCAACTCTTTGGAACATGTCAAGAACCTTTTACAAA CATGCAAAAAGATTGTTGTTCTAACAGGGGCTGGGGTATGATAGTTTTAT TTAAGTTTTCTGTACTAAAAATAGTGACCatgtttatttcaaaataaaac aatctgCTTTAAAATGTAGATTTCTCATAACAAatatcgccgtgtcaatt caagacagacttaaccccctatttcagcatgcacgctttccaaaaacggc cttaagtccacagaattctaatgggaaagaggtgtattttgcaattcaaa aaaaataagaatttataATGTCCCATAAtatatcaaccataaacagcctt aagtccCAAACTTAAgggcaaattttattttttatgaagcATTGGAATGA AATgtgtagccttaagtccaacacatctcaacctttaaagtcaattatct caaaatggaaaaaatggacttaaggctgtcttgaattgacacggcgatat ATTCATCCTCTGGCATAGGGTCCTCCAGGCTTCAGGTACCCCCAATAaaa ttaggtacccccaaaattGTTTGTATTCCTAGGTAGCCCCCAGGATTTGG TACCCCATTGAATTATGTTTTTAGGTACCCCCTTTTTATCACGTAGCCGA TGATAATTTTGTGTCAGTTGTTGAAAGTATTAAAGAACACATAAGAGTAA GACATGTCTTTTCCCACAAGTCCATGtgaagaaatattcaaaataggTGA AAATTATTAGGAAAACAGGTCCACTTAAGTGGGGAGGGGGGTGGACGCCA TGGTCTGGTGACATAAAACACAATGTAATATTGGGCATAATTGTGGTGTT ATTTTCATTCATAATTTCCTTATGCTCTTCTACATTCTGATAATTCCAGG TATCAGTTTCATGTGGTATTCCAGATTTCCGGTCACGTGATGGTATATAT GCCAGGCTCAGTAAAGATTATCCTGATTTACCAAACCCTCAAGCCATGTT TGACATTCACTACTTCAAGTCAAATCAGTggccatttttcaaatttgcta AGGTTGGTTAGAGGTTAATGGATGCTTTTTAAGAtttgagacaaaatgac aaaatgtaAATTTAACGACTTATATCAGAGGGAGACCGTtccaaattttc ttaaaatcttcttTATTCTTTTATTAACTTTTACTGATGACTTTTTGTTT GTCAATAGGAGATATACCCTGGTCAATTCACACCCTCCCTGTGTCACAGG TTCATATCTTTCCTTGATCGAACTGGTCGTCTATTGAgaaattattcaca aaatattGATACTCTTGAACAAGTTGCTGGCATCAAAAATGTGGTGCAAT GCCATGGTAAGTAGTTTTATACAatgtttaaaagttattttgtcTCAAAG GTATTTTTGATTCAGTGAATTTTGAAAAGGGTGATTTTCGTctcaaaatt aagtaaaatatcaagaatctgggctgtattttttgtttaattccATTTTC GTCTTGCACGGAAAGCTTTACTTTGTACACTTATACTTATACAATATGTA GTGCAAACTTACTTACGTTATTGTTCAATCACAGGATCTACGTACGGTTA TTCTCATTATTCGTCATTTTCTCCTCTACATTTTACCTTATAGGTTCTTT TGCGACAGCTACCTGCATGAATTGCAAATTCACTGTCAGTTGTGAAGAAA ttaaagatgaaattttcaaccAGGTTTGCAtttctttctttgtatttttg aattttcaatatCTCTGCTCAGctcatttattattttattatccTTTTCA GTGCACCTTTtcgaatttagcatgaaaattaCGGGGATTACAATTTCCTC AAAGAAACCCAAAAAAGAGTTGGTCTACTAGAATAAAGTAAAGCGAATGC CTGGTTCGAAAATGATTTAACTTTATTTATTACTTTTAGAAAATTCCACA TTGCAAGAAATGTAGCGTGAATACAGTAGAGGATGGACGAATTAACGTAA TTAAGCCAGGTAAGTGTATATTATAGGTATCAATAGACAGCACTTAGTTT AATATtagttattttgaaaaacttcaactTTGTTCGGTTGTACAAAAGTT TACTTTTATCCTGTCGCTTAATTTAGGAAGATTTTATGACCGGTTTACAA TAAAGAGTTTCCAAAATCACAACGAAAACAACGACGGCTATTTGAGATTA GTCTTCGCCGTCGTCGTTGCCGGCAGCAGTCTTTTACAATCCGATTTCGC TTTTTTCTCTCACGTCACGTATGGTATAATTCATTCTCAAGATAACAAAA CATCTTTTCTGTAGAGATAGCTTTTAATGGAATTCAATAATATTGGCGGG AAAAATTAAAgcatttgattttctttctttcttttaaaacaCTGAGAGTT gagaaaacaacatttttttctttcaaaattctcaGTGCAATAAGTGTGGA GAGCTGTCTTTGTAGTCGAGTGTATTATTTGGATTTATATTACTAGCCAT CTTGTCTtgtttgttgttatttttgtcTGATTTGGGTTCACGTTTGTTAC AACGTTACACAAGAGTTGAAGTCCCGCGCGGGAGAATAGAACGTTTCAAG GGGTTTCCTCGGAGGTTCAAGCATGCGCAGAAGTATTAAAACAAAGATTC AAGTCTTCGTCGCTGTTCTAAAAAGTCTAAATCGTGGTATTTCATTGTGT TACTTTACCACACGGTAATAAAATCTTTCATTATAAAAACGTCTGATGAT CTTTGTATACCTTATTATTAAatcaaattgaaataattttccaTCCATCT TTTTTGTTTGCAGATATTGttttctttggtgaaagtttacCAGAATCATT CCATCGTCAAATACAAGATGACAAAGATAAAGTAAGAAGCTCTTTCAAAA AGAATAACGCCCTAGAGAAATGAAATAGATGAATGGCCCATAATGATTTG ATTTCACGTTGCCTTTTGATAGTttttaatagacgatatcggcttaacga attctccccgaatgattacccatgatgcattgcgcaaaaaaattcacgga ctatattgacttactgaatttttttgcgcaatgcatcatgggtaatcatt cggggagaatttcgttaagccgatatcgtctattacggATTTATTTCAAC TCTTGGACCTAATTAGGTCCGCTAGTTTGTTTGAATGTGTGAAtacttga aaatcgaaaaaaaaaacggatTCTTCTTTACTGTACCTAAGACTAAGAGT ACAGGCTATGTTAAGTGTTTCATAAgataataatttaattttctcaggct GATTTGTTGATTGTTATCGGTTCATCGTTGAAAGTGCGTCCTGTGTCTCT CATTCCAAGTAAGATTTTTGTATTCAAGCATTTGTTGACAATTTATCCCT TGGTCCTGATTCGATTCTAAAGGTTCTAAAAGATTCAACTTGTTGGTTGC ACGGCATCTCGTACTCTCTGCTACCAAGAAAAATACGTATACCTTAATCC CATTAATTTCTGCGCACTCGCCTGTGCGAAAATTAAAGGGCGTGCAAATA TACCTCTGGAATGTAAGATCTGGTTAAAATGCGTACTAAAAATGAGTGAT TCTTTTGATTTCATGCCTCTCCCTCTTTACgtatattttttaacaaaaca cTCAAACATACCTCAGAAATTACAAGATGCGccaggggggggtcagtgta ctagaaggcggcatgtatgtgtactacaaggtatttttcaaaacttgaca cccacccacccctgaagtacaccatactacatggaaaaatcccaaaacca ccccataccccctatttactaccgggtagtacctggaaaaatcctaaaac caccccatacccccctatttactaccgggtagtacctggaaaaatcctaa aaccaccccataccccctatttactaccgggtagtacctggaaaaatcct aaaaccaccccataccccccatTTACTACCGGACACTACCTAGAAAAATC CGGAAAATAAAGAatcttttttccgaaaatcggaaaatcgggtaaacatt tttccgaaaatcgggaaaacatttttccgaaaatcgggaaatcgggaaaa ctttttttcggaaaattaggaaatcgggaaattgggaaaacttttttccg aaaatcggaaaaacaggaaaaattttctcaaaaatccaaaatgcgtgaga aatcaaacttttcaaaaattacgcgagaccatgtggaaatgcATGAGTCT CACACCCAATGCGTAAGAGTTGGCACCaatgttgaatgtttgaattcaaa tgttCGAATGCTTACATTGACTCGATAAACCTTCATTTCAGTGGGATCTA GTAGGATTTGaattcattccaagaagtttggaagaatgatcttgaacaaa cttggcttgatcaatttataatagaacaattttacgtttctattttagca gataatttctgaacctttttgtttccacactcttaacatcgattttggac ccaaaacccctattttggtacacaggtactaaaaatcaaattcgattttg gacccaacaccccaattatagtacacaggtagtacatgacaaattttttt ctcaaacacccacccaccccaggatacatgccACCTTCTGGTTTACGAAT ACCCTATTTCATGAGGTTCACGTTTATCGACCTTCTTTGTTTAGATTTGA TTCGACCTGACGTACCACAAATTCTAATCAACCGCGAGCCCTTATCTCAC ATGAGTTTCGACGTCGAGTTGTATGGCAATTGTGACGACGTCATCGCCGA GTTATGTACTCAACTTGGATCGGAATGGACAAACGTCTTACAAGGATTTC AACATAGCACGTTAGACCCTGAAAGATGGAAAATGTTTTATGACTATTGC AATGGTAGTGTGACAACGAGTGCAGATGAAAGCGAGAGTGAAGTCGTAAT AGAACAAAGtgaaagtgacgtcacaagCCCAAACAAGGACCACCCTATAA AACAATCACCCGAAACGGTAGAAAATGATACTGACGATTCAGATTGTAAA TGTGGAAGTGAGATGGATACGGATAAGGAAGACAGCGGAAAACCTGGAAA CAAGCGGAAATCACCAACGGCTTGCGAGTGTGCACCAGAGTCCACTTCAA CCAGTGAAAATGGATCTAGTCCAAATAAGAAAACGAAATCAAATATTCAT ATGGATAGTGAGCAAGGTATATCgtttatcattttcaaaaagtattaGTA TGGCGATGCTCTAAATTTTAACGACAATGATTTTTTGGTCTTCGGTTTCA ATCTGATTTCTTTCACCTACAGAGCTGTCTTGAAAATCTTTATTATTGAT TACAAATTCTTGATAAACGTAAGAAACAACCCAATAAGCCGGAATTTGAC CCGTTTTGTGGCTAAAAAAAGGTATATAGGAATCAAGTCGGCTGTTTCTG ATAGGAAAATGGCTTATGATGCACATCAGTAATTATTTCAATTCTCTTCT CTTGTAGAAATGTACTATTTATCTCTGCCACCCAATCGTTATTTATTTCA TGGTGCTGAACTGAGCTTCGGTGATGATTCCGATTCCGATAGTGATACAG AAGGTCCATTTCCAGAGCAAGACACTTCATCGCAAGACGAAGGTAGTTTG ACCGAAGCTGATGATTCCACAGCTAGTAACACGTTCGAGGAAGTAGATAG CGGAAGTAAACAGGACCAAAAAAGCACTTATATGAATACTAGGGATAATA ATCTCTCTGGAACTCTTAATGAGACTGAACATAAGGAATATGAAATCGCA ACTCGGAATAATCTTTCAACGGATATATCTGACATTAAAGATGACATTAA CCGACTTGAAACTGAAGGGAAGACTCGTGAAACTGATATTACAAGTAGTC AAATGTCCTGTACCTCTTCCTCCTCGAAGATGTTAAGTATGCAAGAACCA ATAGAGAATCAACTTCAAGTTAAAGAATCTTGCGAAAAAGATAAGGACTG TGAAAGGCGGGAAAGAAAATATTCACACGATGAAACTCTTTGTTCAACTT CGAGTGACGTCGAGAAGAAGATATTAAATCTCTCTACTTCTCATCTCTGC CAagatgataaaaagaaaaacgacgATAAAGCAGAGATAACAATtcataa agaaaagaacaataaAACTCTTGATGAAGGATGCGAAGGAAAATCTGAGA TACAAAATATgaaggaagaagaaaaatgagaatTATTTTGGTCGTTATAG TATGGACTGTTTTATATTATAGCAAAATTATTATCGCAAACCAGTGACTA AGTTGGTATTTTACATGCaggaaaattaaaagaaaataactATTTTAACA GATTTAAAAACTTATTGATGTAATgaactttcacaaaaaaataattgcGT CACATGTCAGAAGATTGAGCGTTATCTTATACATACAAATTGCTTTTAAA ATTATAGCTAAGAAAGTTAGGCTTACGTTTTGTGTACACTGACTTttata cacgtctttttttttttaagaaactagttttaccaagcagcctcaatgtt tcttaagaaatcggccttttgagcct
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00023571TCONS_00023571Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00023571-proteinTCONS_00023571-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000456supercontigsc0000456:210232..220307 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
14.15 13.34 5.97 4.87 15.97 12.1 11.08 11.97 6.92 10.24 9.14 5.6 7.25 7.09 6.79 8.12 8.61 7.82 4.88 5.27 6.46 6.33 33.31 29.12 11.34 12.2 8.43 7.63 24.94 28.63