XLOC_013236 (gene) - C. hemisphaerica

Overview
NameXLOC_013236
Unique NameXLOC_013236
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000456:43937..50617+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_013236 ID=XLOC_013236|Name=XLOC_013236|organism=Clytia hemisphaerica|type=gene|length=6681bp|location=Sequence derived from alignment at sc0000456:43937..50617+ (Clytia hemisphaerica)
ctttagagtctaaaaagaaaaacaatgtaaTAACTATACAATCATCTTAA CTTCTGTTCGATGCAATGTGAAAATGGGGCAATTAATGTGTTGTCAGTAT GTTGGCAAATCAGTCACCGTCAATGGGACAACATATTCAGTTGATAAAAC CATCGGAGAAGGAGGTACTAAGATTCCAAAGTTTGTTTATCGAGCCACAa tgaaaagagaattttttccaTCTTTGGAGATTGATTTGTATTTGTTATGA TCattgtgaaaaacttttttttatatataataatcCTTTCGTAATATTGA TTTCTCTCATTTCACTTCAGCTTTCTCATTTGTTCAGCTAATGTCCAAAG GCTCCAAAAAGTACGCTTTGGTAAGTTCTTCCGTTAAACGGCTTACAATG GTGTGAATTTTGAATTCTAATGCTGTTCATTCTCATTTATCAACATATAA ATCCAAATTGCTATACTAATACCCTGTTCCATATCTTGGATACTCCAGTT AGGTCTCtaatacaattttttgtttgtttttagaaaCGTGTTTTGATTCA ACTACCGGAACACAATGANccacgtgataggcattgataatacaaattta aaaaatctaaagaaaatttttgaaaatgatgacgtcatttatgacgtcat caaattttgaaaattttactcatcttcagcatagattttaagaaaaaatc ttcatggaaattgcaaaacaggcaattatgttaaagaacagtcttttacc tttcagaatcttcaaacagaatcgaaatatctttattggttcgactgtat ataatagacatttttggtaaaccatatatttgggcttttttccgacaggt ggaaattttgtgatgacgtcatcagtttttgaatgacgtcatcaattttt ttttcttcctggaaaattgtatcatgatggagaacatctgtaccaaattt catggccatagctcttctagatcgaaaataatcgagtgtggtagattcta ccccccccctggggatacaaaagtcaaaaaagcttgaggctaatagggtt aaaggaAGATTCGTGGAAACATAAGCCATTTATATTTAAATCCTGTCCTA ATGCCATTTTTCTTCCATCTTCAGATGGTTGGTAGAGAAACCAAAGCTCA CAGAGCAATCAACAATCGCTATGTGATGCCATTAATTGACTCAGAAGTTG TAACCAAGAGTAACATGAAAGAAGCAAGGCTCCTCTTCCCATACCATCGA GTAAGAAAAGTGTACAAAGATATTAGTAGCCCCATCGTTTAGTCTTACTA CGGGTCTTGAATATTTGAATAAATAgaacttttattttgatttgtgcTTG ATAATCTATTTTACTGGCCAAATAAAGTTTATTTCTTATTGATACAGTAG AGTCcttataactcgaatgtcttcttaactcgaacaagttttcttgtccc ttcagttaagaatgccttataaaccttacttcataattcgaaatttaatt aactcgaacaaatttgtgttcaagttatggagactcttCCACTGTATATC AATATCTTTAATCCTTAAATTCTAGGTTTCCAGTATTATTAAATGTCCCT CATTATCCTCTTTTCAGTTAGGATCAGTTCAAGAAATGATTGAGGTTGCC CAGATCTCTAAGAATCCAATTgcagaaaaagaaattcttcaaatttttaa aacgcTGTGCGAGGGTGTTTTAGCCTTTCACAAACTTGACCCTCCTCTTG CGCATCGTGATATCAAGGTAGGTTTTTTATGACTTTGATTAGTGTAagct tttttggacctacctaaggtagtcctttaaattaacccttgtccgttcgt tcgtccgttcgttcgttcgttcgtctgttgccagcttttctcgNAAGTAA CTTTGATTAGTGTaagcttttttttctttatattgacctaccttaagtgg ataaattttggcgtggatttaatttggcgaatgaccaaaatacgattttc tgtggggatttaatttggcgatcgatcaatttcgtaaaatttggcgggga tttaattcggcgaattggaaattttgtcacaccgaaatgggtgaaaatta ctcaaaaatatactaaaaagttgtgatttttcacataattttccttttgt taaatttggcggggatttaatttggcggattgccgaatttggaaattttg gcgaggatttaatttggcgaattttgccaaaatttgccaaactcgccaaa tttaatccccgccaaaatttatccacttaggTATTCCAAGGAGTTTTCTC CTTATTGATGACGATACTATAATCTTTTTAGCGCTAATATACCAATATAG GTTCAAAGTACAGGCGCCCtccaatttaaaaatatttgaaatggtAATTT GCTCGGAAAACCTTACCTTGAAAACATTGAAGCATGAATCTCATAGCGTG TGATAGCGTCCATTTTAGAGTTTGGTTAAAATAATTCACTTAGGACTATT TCTCTTTAGCCACATAACATGTTGATCATTGAGCGTGGTGCCATTCTGAT GGATCTGGGAAGCGTTCGTCCCGCTCGTGTGCCAATTTCATCAAGGTATA CAATCGCATTACCTCTCATTTGCCACTTCGAGATGCTTCGAATTaatctt caaatttcttttgtgtACTTTTATTGTGGAAGACATGTTTCGTACTCGCC CTCCTGGCTCAGACTGGTACTCTTACAAGGAAGATTTAGCTATTAATCCC TcgcttttcattctttttagaAAAGAAGCATTGGCTTTGCAAGAGTCGGC TGCTCAAGAATGTACAGCTGCTTTCAGGTATTCTCAAAAGAAATGACAAT TAAAGGAAAGATTTGCAATATCTTCTCCTCGAATGAAAAAAATCGTCCCC CTCCAAGTTTTGTCTTGCCTCGAGGATGCTTAACTAGCTGTAGTACGCAT AAAATTTACGCGTAAATGACCACGCTGACCGAATGCTGAAGGTACATTTT TTACGCGTAATTTATGCATATTGGCCAATACGCATAAATTACCTTTCTAT AGCAAGTCCTGTCCTTTAAAATCGTAGTACAGCTTTTCGTGTTACATTTG GCTACATACTTGTAACAAGTTCTACATGGCTCCTTATTTCATCACTTGAC TGCCATAGATCCTTTCCAGCGAGTGCACAAACTCCGAGAAAAAATTCTTC CTTTCCATACAGTATTATAGCTGTTATTTCATGATGAGATAACTGATATG TGATAATGTTAGCATCTGTAAACTAACGTTCTTCAGTTTTTCTCTTCTAA CCTCACATTCGCTTAAATATATTAATCCATTCAATTGTTTCTTCATTCAG ATTAATGATTCTTGTTGTTGTAGAGCACCGGAGTTGTTCGAAGTTCCCTC CGAATGTATGATCAACGAGAAGACAGATGTGTGGTCTTTAGGGTGTACCT TGTTTGCTTTGTGTTATGGTGAGAGTCCGTGTGATGGAAGTGCATTGTCC GCTGTCAATCCTCAAATCAAAGTCATCGAAGGAAAGTAAGTCCACTTTAC ATTATTTGTTTCGAAGCTTAGATTACATGTTTACTTATTGAATTTGttat ctattcatgatatgcaccactggagagttcttctgagaacttttaaaatt ttccacccaatacgtcacttaaaaaatagaaaatgacgtattgctgaaac aaaaacagaaaagttgcataatttcgtgaagtcattgcagtggtgcatat catgaataacttacaaagtttttctttaatattcatgatatgcaccattg caatgtcttctggcattacatcacggacccaatagctgattggttgtaag tgacgtaaagtcAGTCAacacgtcactttcaaccaatcagctgttgggtc cgtggaagacattgcaatggtgcatatcgtgAATTGCCAAGTGGTCTTTG ATGCTAGAATGAACAGCATAATCTTTTTTTGGTTGTGTAGTTTACATTGA ATCGGTCTAAATTTATGATTGTTGAGCGAAGAGTGAAACGGAAACAGGTT TAATAGAGAAAGCGAGTCACCAAGAGTCACAAAGTCTGAAGTATTTTAAT GATGTTCAAGATAGTAAAGACTGCAGCAAAGATTTCTCGGTGGCAGAAAA TTCCTAGGTTAGTAAGTTATATCATATTTTGTTTAGATTTGTGCGTTTGT TTTGTTCATTGCGTGGTAATTTCTCTTTATATCATCAACAATACAAAGTA GTAGGGTATGGTACAGCCTACACTTAAAATTACCTTAATTACGATAATTA GATAACGCGAAATGTGGATGatgaattttacattttaattttttcagata ttcGATGGACTTGCACAAGTTGATTTTCGCCATGCTCAAAGTAGAACCAG AAGAACGACCTTACGTAGAAGATGTATTATCAATTTTGAATGAGATACAG CCAAACCTATAANCTCTTTATATCATCAACAATACAAAGTAGTAGGGTAT GGTACAGCCTACACTTAAAATTACCTTAATTACGATAATTAGATAACGCG AAATGTGGATGatgaattttacattttaattttttcagatattcGATGGA CTTGCACAAGTTGATTTTCGCCATGCTCAAAGTAGAACCAGAAGAACGAC CTTACGTAGAAGATGTATTATCAATTTTGAATGAGATGCAGCCAAACCTA TAAAGACATTAGCCCGGAGTAGAGAAAAATGTTATCTTGGAAATACCATT CAGATTATAGGCTGATTTTTTGCGTACTGAGACTGCATCATGATGAAACT ATTGATACGTCTAGATCTAAAGACAATTCAGCTAGGAATTATCACGTCGA CGCCTTTTAATTTTAAAGACTTTGAATTTGATGCGTACATCGCATTcaat tttaggattttttaaattttgttctcagctagatttttattttattgcta TTTGTCAAGATCTATCATATTGACTCTTTTCCGTCATACCCTCTGCGATA CACcttcttctcacagacccggtaggattttttttacCCTGGGGGTAAAG ATAATGGACTGATTCTCGACGGGAATTAATCCACATGTTTTATATGGCTG TTGATTTGAATTCAATTGTTTaatagtcagaaaattcagtggaaatggaa aaaatgacacaatattttgcagtgaggattttttTATTGAGGAACATTGA AACGTCATTTTCCACTGatattttagtcaatttttccagtgggaggggtt ccagtggatctgtgagaaggggtgttgcTAGAGAATGAGAACACAAGAAA TCTATGTGAGCAAACCTTTTTTTGAAGCCATCTTGTcaataatagtattg tgtagtTTTTCATCCATTCATTCTTAAGTTTTTCTCGCCTACTGATGGTT TCAGTGGAAAGCAGATgatgagaaattttttattctgAATCTTTGTTCAA TCGTCACCAGActtatttatttgaaaactaattttttacaaaaatttata ttattattttcaaaactttagaatatctcttttattttaaaggGGAAATA CTAATCAAATTTCTACATAAAGAATCGATCACTATCTTGATTAATCAATG AAACTGTCATTCTGTGGCATCGTCATTCCTTGTCTATAATGTGGCTTTGT TACAGTATTTAAATATGAAATCCCATGGCATTGGGCAAAGTTTAAAACAt gctataaaaatattttaagttcaagatattttattgaaattacGTAATGT TTCTTCTACTTTTTATGTAGCGAAAACTTTTGATCACGTGACAAATATTA CGCGtcattcttcattttcgaataAATTTCGTTTTGCGTATATCAATGAC ATTTTGTGTTCATGTAGCTGATCCTTCAAGTCGCCAATGTACATAAACTG TTCTTGTATCAAACccttatatttcaaaatttccatacTGATATCGTCCA TTTTGCTATCTATTGTCAACTCATGCTCAAAGTGTTGTTTCAAATCAAGG TTTAGGTTTTGTAATTTGTCTCTAAGAATTGTGTTATATTTATCTTTCGT TAAGGCTTGTTTGATTTGTCCCTGTTCTTCACCACTTGAATCCAGTAGGA AAGCACATGATTTCATTTTCTCTTGTAATTCTTTGTATTCACCTCGTAGC TCTGTAATTTTGTATTTCATTTCTTTAACTCTCTCTTCCTTCTTTTCTAT AATGATTAATTTTTCCTCAGCCATCGTCTTAAGGTCTCGGTAGTGATCAA CCTTACTCAAAGATTTCCCTTGGTCTTTATCAAATGACATTTCGAAGGTC TTTTTGGTAATGATAGCAAACGATTCTGTTGATCTATCATTCCCTATTCA ACCAGtctttttaacaaatatttcaacTTCAAGTACATTTTCTTGATATC TGCTAAAATCATTAAATAATTTCAGTTGAATTCCCTGTACAATTATCAAC CGGATTCTCTGATTACTCTTTCAAACTATagatgtttttcatattttgtt aagttacgtaactttCACCATTTCATTATGGAAGCAATCGCATGACGTAT TcttctacagggtgtccggaaaaaaagtatcaagTCGTGCTACTTcgata gaaagaaagttcttgtgtgtgtttcactaaatttacaatgtttatcaaag tttctatctgtgtcatattaattatcacgag
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00023540TCONS_00023540Clytia hemisphaericatranscript
TCONS_00023541TCONS_00023541Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00023540-proteinTCONS_00023540-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000456supercontigsc0000456:43937..50617 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
STK16serine/threonine-protein kinase 16 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
24.23 23.38 44.59 37.54 37.64 28.12 38.1 40.29 34.15 38.57 26.69 25.09 17.8 20.17 23.13 23.67 32 29.96 10.55 14.15 19.53 19.88 40.67 40.69 25.23 25.24 26.92 22.05 30.36 30.82