XLOC_012464 (gene) - C. hemisphaerica

Overview
NameXLOC_012464
Unique NameXLOC_012464
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000408:210350..216107-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012464 ID=XLOC_012464|Name=XLOC_012464|organism=Clytia hemisphaerica|type=gene|length=5758bp|location=Sequence derived from alignment at sc0000408:210350..216107- (Clytia hemisphaerica)
GTTTTTCGTCCGGCCAAATTTGTAAACAAATATGGTAGCCCTAATTCGGC AAATTTCATCAGAGAGGCTGGATCGTCCCATATTTTTTGAGCATATTTCT TTTGATAAAAGTTCAGGACATTTATTGCTGGCAAGAAAAGTTTTTTTTAA CTTATTTTGATATTTTAGATCATTAATATCGTATTGAAAGCAGAAACAAC TGGAAACGTATATCAATAAAGCGAATTTCATACTAAAGCTTTAAACAACA TCCATCCCGTTTGTTCTTGCATTGCTTGCTCTTTTTGTAGCTAGCAACAA ACTCAAAATGAAGCTCTACATGTTCTTAGTAAGCATGTTCAACTGGGCAT TGGGCTACTGCTATAAACCAGTTGTTATTGTACATGGTGTCATGAGTGAG GCAGATCATCTTGAAGATATGAAACAAATGATTGAAAAACATCACCCAGG AACAAACGTCACCCTTGTTCATCTCTATCCTGATATTGAAAGCTTCACAC CACTTCAACGGCAGTTGAAATACTGGAAACAAAAGATTGAACCTCTGATG AAAGAAGCTATTGATGGAATTCACTTTATTTGTCATTCTCAAGGTATTTT TAGTTAATCAAAGTTCTAGATTTTTTGGTCTTTTTAATGGATTGCATATA ATTTGTTAAGACACCCCCCCCCCCCACTNNNNNNNNNGTATAACTGCTCT AACTTGGGACTATGATATGGAAAAAAAATATGTAGTGGAGCACACACGAG TGTCTTTGCACTCTAAGAGGAACAAAGAAGTATGATTGATAAACTTGGTG GAGTTATCAAAAAAAGTTTGTTGTCAAAGAGATTTAACAGTAAGTGAAAA TACAGGCCAGATATCCCAAGTTAGAGTAGTCGACGGTAAGTTGATAAAGC CATTCTAAACATTCAAAATTTTCATCAAAATTCATACAGTTACATCAAAA TGCCTCGAAAATGTCAATATGAAAATTGCGTAATCAGAGAACGTATGTCT CGCTCATTATAAAAAGGCAGAGACAAACTTTNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNTCTATTCAGGTTGATTTTTTATGACTTCTAATGGTACTT TTTCTAACGAGTTTGATTACTCTGTTCTCACACTTATGTCTTTTTTTTTC GAGTCCTTTTCCGTGATTACTTTTATTTATATTTTTAAAGACAGGTAAGA AGGCATATTGATGTAACTGTCATAGCAAGCTTGCATGCATCATCATGACC AACCATGTTTTCTTTGAGACTGAACTCTTGTTTTTCTTTTTCATTATTCA TGTTGTTAAAAACCTTATCTACACTAAAAGTAGAGAATTACCCTTTTTTT GTTATGGAATTTCTCAACATCGTGTAAACCAGACTTTATGGCTGTAACGA AGTGCGCGCATGCGAGAATGTAGCGAGAATGGGACTTTGGGCCTGATGTT ACTTAAATTTATAGAAATATATAAATAGAGGGGCCTAGGTATTATGATTT GAGAATGCAAATGGCTTTAGGAAGAACAGGTAGTTAACCAAAACATAAGA TCTCAAAAACTAGACTGTGAAATAGTTTACAGCCTGGATATCCAGGCTAC GTTGATATTAGAATGACTTGAAAAACTTTCAAAGTTTCGTATATTTTTAA GGCCTTGTTTTTGGTTTGGGAAGAAATGGAAAATGTTGAATTCATTTGCA CTAAAATGAGAAGAACGATTCAACTGATATAATCTATAAATCTAGTGCAG CATAAAAATCACAAAATTGATTCCAATATTTTTCCAATTTTAGGTGGTCT CATTTGCCAAGGATTAATTGAAGAAACTGAAAAACACAATGTTCACACCT TCATTGCATTGAGTTCTCCCTTGAATGGCCAATTTGGTGTACCTAAATTT GTTTCCAGCTACATTCCCTGGCTGAAAGGAGAAAGAGAAAAATTATCTGG GTATGCCTTTTTTCCGTTAAAAAACAGATGTAGTTTCTGTAACAGATTAA TCCAATTTTGTCAATATTCAAAATGATGACTGAATTTGGAAAATTATCAA AGTCTGCCTGGGGAAAAAAGCATTTTGGTCCGACTGATAGAATGAATGAG TTTATTTTCTTGTTTAGGTTCATGTATTCGACGTTCACACAAGACACATT TGCTATCAGTAATTATTGGAAAGGTATAAAGCTTCTTGTGATCTTTTTTG ATGTTCTACTTCTTTTCCTCTCCAAACCTTTTTAAGAAACAGCATTCAAT CAGTAATATGTAAAAAACCTAATTGATAGAGTGATTGAATTTCTCTTTAG ATCCTAGAGAAGAGTATTATGAATCTTACTTAGATGAATCACGATATTTA CCAATCCTTCATAATAATCCACAATCTCCACGAGCCGATGGTATGTAAAA TAATCAGAAAAATTATTTTTGAAATTTTGACATTCCAAAAGTTAAATTTA AAGAAAAACAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATCTGGGTATGCCTTTTTT CCGTTAAAAAACAGATGTAGTTTCTGTAACAGATTAATCCAATTTTGTCA ATATTCAAAATGATGACTGAATTTGGAAAATTATCAAAGTCTGCCTGGGG AAAATAGCATTTTGGTCCGACTGATAGAATGAATGAGTTTATTTTCTTGT TTAGGTTCATGTATTCGACGTTCACACAAGACACATTTGCTATCAGTAAT TATTGGAAAGGTATAAAGCTTCTTGTGATCTTTTTTGATGTTCTACTTCT TTTCCTCTCCAAACCTTTTTAAGAAACAGCATTCAATCAGTAATATGTAA AAAACCTAATTGATAGAGTGATTGAATTTCTCTTTAGATCCTAGAGAAGA GTATTATGAATCTTACTTAGATGAATCACGATATTTACCGATCCTTCATA ATAATCCACAATCTCCACGAGCCGATGGTATGTAAAATAATCAGAAAAAT TATTTTTGAAATTTTGCCATTCCAAAAGTTAAATTTAAAGAAAAACAAAG TTTTATTTTAAAATTTAGCAAAAGCTTTTCGATTAAAAAAACGTCTTCAG TGCTACAAGCGATGTTAAATTTTAAAATAAAACTTGTTGTTTTTCTTTAA ATTTAATTATTTTGAGTTTTATAAAAAGTACACAAGTATTTGAAAGCACT GGAAATCAGTATAAGTCGATCATAATGATATAGTAACATATATTTTAAAG TGGCATGAGAAATTGTTTCCACGAAGGGCTATTCTTAGATATTTGGTTTC TTCCTTGAAAACAGTATTACAAAAATGTTATTGAGAACAACTCTACAAGT ACCTAAATGAGTTTAGAATATCAAAAATGACATTTCTTTCATTTAAGGAA ACTAATTGAATGACACTTCAACTTTCTTTCTATCAAACTTTAGATATGGC GAAAAGAAAGAAGAATTTTTTAGAATTGAAGAAGCTTGTTTTGATTGGTG GACCTGATGATGGAGTCATTACACCTTGGCAATCTAGGTTTGTTAAATGA ATAGTCTGTTTCCCATATTATCGAGGGTCTTGTCCTTATTTCATCCTGAT AAAGTTTAAAAGGTAGAATTTGGATTACTCTACACTATTCAAAAATGGTC AGTCTACTTTGAACTTATAATCACTTTTCATTTCAGCTTATACGGATTTT ATGATGAAGAATACAAAATCCAAGACATGAAACAACAAAAAGTAAGATTA CTTTTCTTTTAGATGTTCCCATTGCCTACACAAGGTGATTTTACTGAATT CGGGTCGACTGTTAAAATTGTTTTAAATTTAAAAGAAACTGCTGCATGCA TCTCATTCGCCTTATTCCAATTTCAAATCAAATCAGAAGGTAGATGAGGA AGCTATTCAGCTCTTACATTTCTCAATCACCGCTCGAGTATTCTGATACC TAAAGACCGGTCTCCACTTGCGCGCGCTTCGATCGCACTTATTTGTGCAA AGCTTCCACACTATTGGTCAAAAGAAAAATGAAGCAATTCCATTGAAAAA CAAACAAAAAAGTTGAAATGTGCTCAATTTTTTTTTCGAGCGTGCGCTAC ATTTTTATGACGTAATCTTTTTTCCAAGCAAAAATGATTGAAGCCGAAAA GTGCGATCGCAGCGCGCGCAAGTGGAGGCCGGCCCTAACAATTTCCATTT TTTCGTCAGCTCTACCAAGAAGATTGGTTTGGATTGAGAACACTTTTTGA AAGAGGAGATGTAGTGATGAGTTCCATCCTCGGTGTCAAACATATCGAAT GGCATGGCAACCAAAATGTTTTCAAAAGCTTCATCGAGCCATGGCTTATC TAGAAAATATCATCCTTCACATCTAGATTTCCCCCTTATTTTTGAAACTT GGATTTGTCGTTATTTGGTGTTCCTGTTTATTTGTTTGGTGTAGTGATGT AAAAATGGGTCTGGCGCTTGTATTGTGAACATATTCTATAAAATTTCATG TTATTTACATATCATTGCTTATTATTGTCGTATATATAACCTTATAATAT ACTCTGTCGTAACGTATAACGTAAAACTTTCTATAACACTCGTAGAGATT TTTGTACGCTTTTTTATAATCGCTAGAATTAGAATTGTCAAATTTTGGCT AAGAAAATATTTTGTATGGTTTTGTTATTGGATTTTGATTTACGAAATTC TTAATTGCAAAAAATATCAAAAAAGGAACAAAAACTTATAAATTATTATG CAGCTATTGATCTTGCCCCTAATACTGTCCCCATGTATCAAACGGTCCAA CATTAACTCCAAGTCAATAAAAAAAATATATCTACAAATCAAAACTATAA ATCATCAATTTATCTACAGTTAAAAAACAATCATCAAAGATTCTTCTCTT AAGTCAGCCAAGGATATACAGCTAACTTAAGCACAAAATCGGAGCCAGGC CAAGAGTCATGGTCGATTCCAGGGATGACATATGACGTCACTCGCCCTTG GTCGTTTTGTGTTTTTAAGCCGAACCAATCGTCTTGGTACATCTATGATC GAATGAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00022238TCONS_00022238Clytia hemisphaericatranscript
TCONS_00022237TCONS_00022237Clytia hemisphaericatranscript
TCONS_00022236TCONS_00022236Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00022237-proteinTCONS_00022237-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000408supercontigsc0000408:210350..216107 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
PPT2lysosomal thioesterase PPT2 isoform b precursor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
102.48 97.8 46.44 35.84 24.44 18.52 27.06 28.51 36.53 30.86 29.06 30 23.14 22.58 45.22 52.94 27.1 34.33 20.93 19.6 70.96 71.82 60.33 63.67 90.93 78.15 21.49 26 53.22 75.75