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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000115_pilon:442156..451509+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14053.2.p2 ID=MSTRG.14053.2.p2|Name=MSTRG.14053.2.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=9354bp|location=Sequence derived from alignment at sc0000115_pilon:442156..451509+ (Clytia hemisphaerica_ch_hm2_pilon)
TAATTGTCGAACTTATCTTTTTTAAACCTAATGCTAACATAGGAATAAAT
TATTATGAGTCAAGAAGAAGAGGAAAAGGAATGGGTTGAACAGCTTGTTG
CAGTTGAACTTGTTGGCATGATTGATCCTGATAAGTTGAATATGATTGAC
AAATCCAATAGCGCAATTTTGGTATGTATATAGTACCCTCCATTTGGCTT
ACTTTCATAAAGAAAGGGTAATAAATAGAGCCAATCTGCGATATGAACAT
TTAAAGCtttgacaacaaaaaagttGTGTCATTGAATTGAGTCGTGATAC
aatgttgaatttttatttGGTTGATAAGAACTTGTAACTTCCCTCCATAT
TATAGTGTGAAATatgtatttttaatttcataatAACATTTCGTATTTCA
TTCTATGACACTTGTAAATCTGTTTTATACAGTTTTATATTGTATTCCCA
GCAATCTTGTAACAAAATGTTTGAATCAAAGAATaatgttgaattttgat
ttgataggGCATTTCATCAGATGAATCAACAATTTTAAAGCTTGGAGGAT
ATGCTTTCAGTGGGAAAAATGAAGATGCAATAGGATCAATTGTTGCTTTT
GAGGATGTCAGCGATGAAGGGGAAGAGCCCAAGTTGAAATATGTTGGACA
TACAACCAAAGTGATTAAAGCAAATcggatttttttgaaagagaagaaaa
aggaaaacagCGAAGAAGGGGATGTAAATGGCCAAGATCAAGagaatgat
gaaaatgaagaatagCTAAAGGTGTTTTTGAGGGCTAAGATATCTGCTTT
GAGACATACATTGTGATAGTTCAACTTCCTGGTGTACATTTGCAAATTTG
ACTCTTCAAAAAAGATTATATTGATCTTTGGTTAATCACCCACAAATACC
AAATAATCAGTGTGATTAGGCTGTAAATCAAGAAATAAACTCATTCCTAT
AATAAGTTATTATAACTAGTATTTTGAACCTGTACGTATATATTATTAGT
ACCATCGATGGCAAGTTTTATAACATTTGAGCATATAGTTATTGCCTGGA
ATAGTTTACAAAACtttagaaataaaattattaacaCCATAAAACGAATG
AAAATTCTtgaccaaaaatgtttttctgacTCAATATTTCAATATATGAT
ATATTATAACTGTATATTTATgtgttcaatttctttttatagaCAATCTT
AAATATAAACGAAGAAAAGAAGTATGAACGGTAAAAAAGTAAATGCTGTT
TTGCCAGCTGCTGGTATTGGCACAAGATTTGGTGCTCAAAAGCCTAAACA
GgtaattttgaattgtttttagaCAAAGAAAAATCCCCTTTATACCTAAG
GAACACATTTTGGCGGGCATTAAATATCctgaaataaattaattttggtg
ggaacttattttggcgaatggcgaaatttttaaattttggcgggaactaa
ttttggcgaatgacagcgtaaatttgttctattttgccttattttgagca
actttgatgaatttcagggttctttaggcaaaaaaataaaaaaataaatt
ttggcgggaactgattttggctaatttcgtctaaattcgtctaaattcgc
caaatccgccaaaattagttcccgccaaaattagttcctacCCCGATTGC
GATTGCCATTTTCtggctccaggcttttaggccttactcttggtctatag
gcactgctatgggcgaccactagtgacccccaccggcaAATCGCTTTTTT
ATAGGTTTCTaaggtgtgaaaaagggacccttagaTCTCCCACATACCCG
GTACCCATTTTGCTTAAGTACCCCCTCCTCGGgagttaaaatattttcat
aagaaCTCTCTGCTTtcattttataaatattttcaactgaCAGTAAATTC
AATCTTTCAAAGTTTTGTAAACTGAGGTTCGAAttatgtatattttttga
ataatttgagcCAAACGTGATGATTATAAAGatacacttttctttttcta
gttTACTGAAGTAGATGGAAAGCCTATCATTTGTTACACAATAGAAGCAT
TCCAAAGGTTTggttcaaaacaaaatatttttggttgttTAATTCATTGC
GAATCATTCAATCTGCTAATTTTCGAAGAAGATAAATTGTATCACGGACT
TTATTATacaaagtttctcaatcccggccaagcaaaatctttgatcggag
tttctTTTAAAGCCTCGATGCAATGCACCACTCACCACCACTATTGAGTG
AGTGCACTCAATAGTGCTGCATTGCATCGaggcgctagatctacttttcc
tgggatacttttgatgatgtagcgctgtTAAACCTTACTTTTTAATatta
caatggcttctttatgGTCAGTGCATTGTATCTATCTTTTTATGATGAAT
cacaaatttttggtttttatctTCATTCGAAGTGCCATCAATATAAAGTT
TCAAGTTCAAAAACCTTGGCTTATTAAGGcttaaaaccaaacaaaaaaaa
ccttgactaaaagtttcatttcagtcaaaaaatttaatgaagatCAATGC
AAAAGGAATTTTATGTATTcacattgtttttatttagtttagtATACCGT
GGATAGAAAAAGTGGTTGTTGTCATTTCTGAAGATTGGATGGAATTTACT
CAAGAAGtattttacttttcatcatcACAACACCTTTGATCTGAGTCCGA
ATAacaatagcgagattatgtatctggaattctctacggctacgttTAAA
GCGGtgagggaaatggcgagtaaggcaagtaatggcgggtgaaagcaagt
tcgatatttgacgtacggcattatgtcgactttgcttatacggtgtattg
gtgtttttcccgtatagagcaaagtagacaacgacatgtcgcctttggtg
acgacccgcatgggcagccccgcaaccccgtagccgtagaatatctccaa
tacataatctcgctaataaACCTTCCATTTATAGTTCTTGATCTGTCATT
GGcgagttttcttttttgaagacaGGGGAAGGACTTAAGTGATTTGGAAA
AATCTGCAGTTTTGACCTGCAAATTCGAGGGCGGTTAAATTGCTGATTTA
TCGTCGTGTTCAGTCAGTCAGGTCTAGGCAAATTAGAACAGACGTTTACG
TCCTCGTTGTCAAACTCACACGTACAGAAACTCGCTATTACAGTACCCAG
TTCCTTTATCTCCAGGCCTGTTTCCCATCTCGGTTACATTATATTATACT
GGTCACGTTACGTAAATGTCACAGTAACATTAATTTTCGTTGTAACTAAT
TTTCGTGGAAAACAACTTTCTGAAATCAATTTTTGTCTTTTAGATCATTG
ACATCAACAAATATGATAAAGTTAAATTAGTTATTGGCAAAGACACAAGG
TAGTAAAACTTGACTCGTTGTCTGTAAGTGGCTGTCTTTTCGAATTGTGC
TCTGAAGTGGAGATTTTTTAGGGAAAACATactaaaagataaatttttCG
CAACTTGGATTTTCGTAACTCGAGTTTTCCAGGCCTCCACTTTGAGGAAA
TACGTATcataataaatttcaaaagctgTCAAAAGTATTTCAAGATTCGA
CATACATATTTTTCATTAGACATCGAAGCATAAATGTTGGTGTCAACTCA
ATAGAGAGTTCTGCAGATGATATTGTGAGTTTTTCTATAGCTGCCTGTGT
TTGAATAATTGAatgaggcgaaaataaaaaaatgtagtgtttccggaaac
cggccgggtgaaaagaatattttttctaacccggccgcagactatgggtt
catctattatggttcatcataaagaaaatcaaaacgaccgttcaagctat
caaacgtcgtttggttagatattcctgcttgtaaatcaagttttgttcgt
tagtagttgatgcattagtattcagggcttacttcatactgtttgtacat
aaaagttatgtttttaaagttctatttcaatgatcttaagttatcaaaaa
tagaaaaaaaaaattttccggccggctgCATGAGAGTTTTATttcttcac
ccgcattccggaaacactacatttttttatttttgccttatAATAAGATT
TTTCCATATTTACAACCTGGTCTCGATTTCTGGTGGAATAGAACcagcta
ccttaaaggaagaaattttggcggaaagaaaatttggcggatttggcgga
tttgactgaaatccgccaaattaagttcctgccaaaatttcttttttccg
ccatccgccaaattgtctgtacacaaacccaatatctacggctaatttca
aaattcattgccgtagaactacgctacgataatcgtgagatacactctgg
tacagagtatccgccaaattaaattcccgccaaattaaatattttgaaaa
tataatctcttttaaggtgtttttgctattttttcgctgttttgacgcca
tcttaaggttaaatttttaagcgaccgccaaattaaattcccgccaaatt
tagtttttccctccatccgccaaattaaattccctctgaaaaaacttttt
tggccatccgccaaattaaattcccgccaaaatttcttcctttaaggtag
aacAAATTCATAGGACTCCATTTCCAATAGGAACCACAATGGGAGTGATA
CAATTTCTCTATTTCATTACGATAATTAAAGGAGTGATTATAGGGAGGCG
GGCCGCTAGCTGAGGTGGGTGGATTTTCGAACGTTACGTCACAGTTTTTA
ACGAATCAAATGGCTAAGAATAGATCATACCTTGCTTATAAAGAGCCCCT
TAATAGGGTTGCCAGGAGGAAACCAGGTTATTTAGAGCAGGATAAAATGA
GACACTTTTCTTTCCACAACCAAATATTTGTTGAATAAAACTCGAAAAAA
CGGGGGAGGGATCCTAACGAGATCCGAAGGGGTTGTGAGTTTGTAAAAAT
GGAATACTTAAGAAATAGGGGgtgtgtttttataagaaatctgAGAGTTA
CAAATTCTTCGTTGCCGCctgaaaaaactatcagtgtagccttagcttaa
gAGTCTTAAAGGTCTTAAAGGTTAATTTCATAGCCAAAAAATATTAACTT
CTGGAATTGAAATACGGTTTTCTCTTATTAGGTTATCGTGCATGATGCTG
TTAGACCATTCCTTAAAGAAGATTTCTTGAAGCAACTTGTAGAGCAAGCT
ATCATTAACAAGGTTTGCTACAAAATATGTACAAGATGCCCTCTTCTATA
AGAACCAGTAGAATTTTCTAACTGTCAGTTCTTATCAATGATGCtatgag
cctcattgttcttataatattATTCCTCTAACAAAATACATTTTGTGatt
aaaatttagttttgaaATTGAACGATTGTCAATTTCgtttaatttcaaaa
agtatgtCTCGCgtatcttcaaattttcaaacaaatttttttcaaattta
aggaGTGAAATCGACTTTTATAATTAacgaactttttttatttccaaaag
gCAGCAGGAGCTGTTCGAGCGTTAGTTTCAACGGTCGTCAAATGTGATGT
TGATGGATTTATGGAAAGCTCTCTTGTTAGGTAACTTATTTTTCATAACA
TTTTTAATTGGTCACTATTGGAAAAGAGGATGTCtcaaaactttctgttt
acggCGTTTTAAAAATAAGCTGTTGTAGTAGAAGATCAGCTCaaacatat
aaaaaatacaGATATTTGAAGTTTAAAGTTCTGTCAATTGAGTACGATTA
agtcaaatttttattaaaacgtAAGAGATTTCACAGGATTCGAACTTCAA
ACGACGATATCTTTTTGTGTGTTTGAGTACAAGAATTTCATGCTTCATCT
GATGATAACAATCATTCTCGTTGAATTTAACTTCGTCATCTTTTACCTTA
ATTTAGCGTTAAGAGATTTTTACTGTAAGGCGAAAATAAATATATGTTTc
atttccggaatgcgggtgaaggaaaaaagttctCATGCGGGcggccggaa
aatatttttttttgctatttctgATAACTTTATATAACCGAACTTATATA
TAAATATAGTGTAAATTCAGTCAATATGTGTAACTAGCTAACTAACGAAG
CTCAAAGCTCCATTTAGAGGGCAATAACCAAATAACTTTATTGACAGATA
GGGCAGCTAACCCACATATTGGtcgaaatgttgaaaaaaatgtcTGCGGC
TGGatgaggaaaaaaaatttcacccggccgctttccggaaacaagacata
tatttattttcgcctaatgccagattttttattcataaaaacCAGGCCAA
CTTTTCGGCGcccccctctcaaaaaagtttcattaTCCTATCTGCACGTA
CGCAAAacttttccaaatatttgacatcCCTTCCCccttcattgtttttt
ttttcagatcgCAGTATCGTGAGAGTCATACTCCACAAGCTTTTCAATTC
GAAGTCTTAGAAAACGCCTATAAACAGgtacaatttttgttttattaggg
AATAAGTGTTATATACACAGAACCAGTTGGACACCCTCTTTTCTGGAAAA
GCGCGCAAAATCGTTCCTGCTGAGAAAAAGTACCCTGAAATCACAAAATC
GAAAGATACATCATTCGATTTTGTGTCCTTAtccagggtgtcccgaaaaa
ggTTTTATGTTAGACTATATCTACGATTAGAGTTGTAATAGGGACCCTGC
CCTAACAACAGTCACGTCTTTGTATCTCTTGCCTGTGCGACCTCTCCCCC
TCATGTTGAATCGTGTGGTAAAATCTGGCGGTAAACTAAAACTTATAATT
CTGTGGAGCCCATAACtggaacacgcacggggaatttaaatttgttcaag
ttaacgaaattttgagttatgtctGAACATTTATATCTgaactgaaatga
aaaaagaacgtgttcgagttaaagagtaaactctagtttagacggccgac
tttctgccctgcctattctaatttttAGGGTAGGCagaaagtgggcacaa
agttggcagttaatatctttgcttgaaaaagattgaaagaagacattgca
ttgacgtcaaaagtgggcaatgcattgactttagacagcccactttaagc
ccactttaattcacaataatTAGAATAGGTAGAGCGAAAAgggggccgtc
taaactagagctaattcGAGTTTAGGTTCGAGTTAAACACGAGTTAAAGA
TGGtcaaagagactccactgtatattaAAAGACAACCGCGTGTAACTTTT
AACTTGTTTGAATGCACTTTCAGTTTCTAGttattctctttttctttgtt
gtcAGTGTTCACAAGAAGATTTTAACCATGGTACAGAGTGTTTGGATTTA
GTTCAAAAATATTGTGGTGTTCGTCCAAAACTTGTCGATGGTCCCGAATA
TCTTTGGAAGGTGtgatttctttatttatttcttatttacaGCGAGGAAG
CTTGACAAAATAAGAAGAATTGTCCTATATTCTAATCTAGCGACTCACTC
AAATGAAATATGAGacaaatattttgcaaaaactTTTACACTTAATTTTC
GACAAGAAACTTCTTAGCTTTAGCTTCAAAAAGAAGGGAAATTATTATAC
GCTAAGGGAACATTTTTGTCATTATTATGAGTACATGCACAATTAAAGGA
TGTCATTTAACGTATcacctaccatttgcttactcaGCATTTTCAAACCA
ACCAAAGAAAGGACAACTTCTCTCCCTGCGCgagttaaaattttgataaa
ttattttgtttattctaCTTTGTCAGTATAGAGGCGCATTGATTAGCACA
TGAATTCATTTGTTATTGTAAtaacccaaaaaaaaaaacactctgagcat
gttttttttcattttgttttcagGTAACTCACCAGAAAGATATCATTTTA
ATGGAATCGTTTTTACAACGTGAGTCATTATCacatttctttgattttta
caATCGCTAAAATAGATTTGGATGAAATACTGCATTGCTTTCAATCGTGA
CGTTTTTTGACGACATGGTGCACCTGCATTAGGTGAATGGGGGAGGGGCA
TGATTAAACAATAGGAGCTGGTCTGAGGAAATGTTTCAAATTTGATAACC
AGGTATTTTGTGAaggtgaaaaatcaatttattttgagCAAATAAGGCAC
TTTCCCGCCCCCGGAGGGGTACCAAGGTAAAAGGAGGGTAGGGCTATGTG
TCGCCCCAAACGGTTCGTTTTTTAGATCTTCACAAAATCCCAATAAGGGt
catgaaaatattattttcatgtcttttgtcgttttttgacgttttatcGA
ATAATTCGAAAAGTAAGTGTTTAGAGaaaaaaaCGTGGCAAGGTATTTTT
CGTCTATTATTCTGGATCATGATCatataaaaagttttattaaatTGCCT
ACTTATCACTTTTTGAAGATGACATGGTAATCTTTCTTTTGTCATCTTTT
ATTCCTTTgtcaaattgacaaaatttattgttgtcaGCCTTAATCGATAG
AGAATTTAATAAGCTTTTCAAAATATACTTTTACTATTGAAATATATTTG
TATCGAAAGCTGTTAATAAAAGAGTCAAGTGTGGTGTCGAAGGTTTCCAC
CTTTCCATACCTTAAGACCTTATAAGGGTTCTAAAAACAGCTCAAATTCC
ACATCGTGACCCTCAAAAGacaaaattttaagtaaaatagTCATAAAATT
TACAACAATTTGTGTTTTTCCTCGATTTAAGCCCCTCTAAGGGTCTCCGT
TTTGATGGTCCTTCTAAGGGCCCGGCTGCCAAAAGTCGGTTGGCATGGCA
CACACCCGTCATCCcgcaaaccccccccccctctgacTTTTTCTCACTGT
TGAAAATATAGTAAATAGTAAGAAACATCAGAGGGCTGTTCATTAGGCAC
CATGGTAAGTGAACGTACGAGCAGAAACATAAAAGgttatctcttttttt
tttcaggagaaAAGGAGCATCGATGACTCAAAGGCGGACATTCGATTAGA
AATGATTATTAaatgaattttagtgaaatttcgtacattatgattgtttt
aatgaattgaatttttattttttgttttaaaattttatatattttttgat
atttttagcaatattgtattgacccaattttatttaatatatcGCACGAA
TACTCATAAAATTGATGTGTGTTATTCCTTTATAcatatttgaaacattt
tctgATTTCTCTTTCCTAGATATATAATACATCCTAAAACATATAAGGTA
CAAAATTTAGAATGATATATCACTTTTTTACTTCGGATTTATAGAGTTAA
CGAGTTAAGTGATACACATAATTTATTGTATTTGAGCAAAAACTATATAT
ACAT Coding sequence (CDS) from alignment at sc0000115_pilon:442156..451509+ >MSTRG.14053.2.p2 ID=MSTRG.14053.2.p2|Name=MSTRG.14053.2.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=750bp|location=Sequence derived from alignment at sc0000115_pilon:442156..451509+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTCAAGAAGAAGAGGAAAAGGAATGGGTTGAACAGCTTGTTGCAGT
TGAACTTGTTGGCATGATTGATCCTGATAAGTTGAATATGATTGACAAAT
CCAATAGCGCAATTTTGgGCATTTCATCAGATGAATCAACAATTTTAAAG
CTTGGAGGATATGCTTTCAGTGGGAAAAATGAAGATGCAATAGGATCAAT
TGTTGCTTTTGAGGATGTCAGCGATGAAGGGGAAGAGCCCAAGTTGAAAT
ATGTTGGACATACAACCAAAGTGATTAAAGCAAATcggatttttttgaaa
gagaagaaaaaggaaaacagCGAAGAAGGGGATGTAAATGGCCAAGATCA
AGagaatgatgaaaatgaagaatagATGAGTCAAGAAGAAGAGGAAAAGG
AATGGGTTGAACAGCTTGTTGCAGTTGAACTTGTTGGCATGATTGATCCT
GATAAGTTGAATATGATTGACAAATCCAATAGCGCAATTTTGgGCATTTC
ATCAGATGAATCAACAATTTTAAAGCTTGGAGGATATGCTTTCAGTGGGA
AAAATGAAGATGCAATAGGATCAATTGTTGCTTTTGAGGATGTCAGCGAT
GAAGGGGAAGAGCCCAAGTTGAAATATGTTGGACATACAACCAAAGTGAT
TAAAGCAAATcggatttttttgaaagagaagaaaaaggaaaacagCGAAG
AAGGGGATGTAAATGGCCAAGATCAAGagaatgatgaaaatgaagaatag
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000115_pilon | genome | sc0000115_pilon:442156..451509 + |
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