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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000127_pilon:506788..514519+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14893.1.p1 ID=MSTRG.14893.1.p1|Name=MSTRG.14893.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7732bp|location=Sequence derived from alignment at sc0000127_pilon:506788..514519+ (Clytia hemisphaerica_ch_hm2_pilon)
CGTCAATCTAGTAGAAGTTTAGAACTTAAACGAAAACATTTTGTTATGAC
ATGTAAAAAGATAGAGAGAGAGTTGACGATTGTCTGTAAGTTGATAACAG
GCAATTTATGAAAATGGTGGAAAACTAGATTGTATACTACTTGAAGTAGA
ATTTTGTTTTACTGTTTACCAATTCAATgagtattttaaaaatgttgatt
ttaatACCACTTCTATCAATTTGCAGTCTTGCAACGACTGCTGGAACTAA
AAATGTGGAGCCTAAAGGGTAAGATCTTAATatatccaaaaaaaacaaac
gttaCCTCTTTTAGCAGCCCTTATCTCACTTTCCCAACCTCGCTTTTTCT
TTCCAGGGCATGAAATCAAAAGAGAAGGAAACTAAAACTTTGCGGCTCCT
TGACGTATCCATTTTATATATGGGGTATGAATTAAAAAATCGGCTAAAAA
CCCACCCCACTGCTTCTTAATTTGAAAATAACACTTAAAGTCAATCTCAA
AAGTATATGAgcactttatttttttgacgaATTCTCAGCTGCAATATCAA
AAGCCAAGTAgagttggaaagatatttccaaggagCATAATGTAATAGAT
TAAAGCTTTTTGagaagttgaaaaatgaagaagaaaaatgaacacAAATA
GGGTTGTGAGCAGACGGGCTTACGTCACTCGACTTCACTCTCCAATCCTT
AGTGGGACTAAAAGAGAGGAAAAAtagaaatctttttattttaatttcat
aaTCTAAAATTTTCTATATCAAATGACAATGGCCGCCCCTTACGTTTACC
ATTGCTAAGTCCACTGTATGCATACAAAAAAGTTAAACTGAActatattt
tcttttcagagcCCATGTATGTCAGAGGCTAGAAAAGTACGAGACTCAAG
AGCAGCAGACAAACACTAGACTGGTGTCAGAGAGTTACAGATACTGTTGT
GAAAGATTTCTCTTGTGTATGAAATACTGCAGTGGTGTAAGGTACCAGTT
TAttagatattatatttttatctaaataagtttgcgtttatcgacccagt
gatattcataaTGGAAGTattcgtggcttggatcacgagagccaaacgta
aatctcgtgatccaagccacagTAAACTTCCAATATTATATTTTTACCCG
CTCTGTCTCAAAACTCTTTTTATGACATGTTTGAGGAACCTCTTAAACTT
TTGACTAAGAAATTGCCTTATTTGGTTGTAAGATGGATAGTGACTCGATA
TACTTAACTGAAAAGTCCATGGTGTTctaatttagaacgccatggacAAG
TCCCTGTCCAATCTCTTACGCAAGAAGCAACTTGCACTCCTTTTTGATTT
ACGGACAGACGTAATACAATCATGAGCTCCGGTCGTGAGTgttatcagaa
tcataaaaaagtgaactaaGAAAATGGGTTCAAGATTGCTAATGTCTGGA
AATTATTATTTCGATTAATGATCAACACTTCAGGagagatggaaaaaata
gcataatattttgcagtgaggactggcttatttgattgttttcagtgagg
acaaaaagtggagtataattttccactggaacgatattttgaccaatttt
ttccagtgggaaggggtcccagtgggtctttgagaaggggaCGCATCAAA
TAATGCCTCAATGAGGTGTCAAGGTGAAAAGACTCTTGAATCAATTCATG
AACGTTTTAAAGTCCAGCACTTCCAGTGCTTAGTTTTACTACCGgattgt
tcttttgttttagataTCGAACAGTTTCAACAACAAAGAACATACCAGGT
CATGGTCATCGCATCATAAAATATTGTTGTGAAGGATGGATTCAAAAGGA
CCAAGAATGTATACGTAAGAcgattatttatttattcttagTGTAGATTA
GGGGTGCACTAAACAGTAAGTAAAACGActctaattcagacatagtagaa
aaaaagcaaaaagtaatggagggactAAACTAAACCCCGTaacgtattat
catataacgcctatacacgcattataaacgattCCATTCTACACTACCAT
GTGATTCACAGGAATATTGAATATTGAACTGTGGAGACAGCCTAATTTCA
TAGATTGAATTTTAGCTGATAAGAGATGTTCCACTTCTTCTTGAATTCAA
ATTATCTAATGAAAGCTCTTATTTACAGTATAAGacagaacacccctgtc
tcacagtcctagtggaacttttttctcagtggagataaaaattcctattg
aaatcccaatggggatagaaattgtattgttccaaggttaaaaaattcag
tggcaatggttttgaagtgcaatttttgaacattgaatttcgaatgggga
tgaaataaaagttactTTCCAAGTGGGGCTAAGGtttttttctaaggtat
tttcccaccggagatggaatttttgtcaatctttccagtgggCCCGGGCt
ctcagcgggtctgtgacatagGGGTATGAAATTCAAGCTATTAAAGTTCC
CTGGTCCGAGTCCTTTAATAACttacaaggaaaattttttcatttttgct
ttcattattcctttaattttttttcagctacTTGTGATTTTCCCTGTTTT
CACGGGACGTGTATTCAACCAAATTTTTGTGGTTGCGTTGAAGGTTATAC
TGGAAAATCATGTGAAAAAGGTAAGACAACTTTTTGTTCTTGTAGAGAAA
TCGTACATTCAGATCATAGTCATAGGAGAAACAATATTTAGGTTCGGTTA
GGTTAGCTTTCTGCAGGTTCAGTCGTAGTGttcgccgccattttgaatat
tctttGCACTCCGTGTACGGCCgacgaaaaatatcaacatttcgCTGCGA
CGGCTTGAGACTAAGGTTTCTCCTATGACTATGTTCAGATCGAGACCAGC
ATTTAGAAATATGGATTAAATCAATTAGGACACAAAATCTCAATCttttt
ttAGAGATACAAATACCAACTCAAAAACCAGTGGACAAAGATTCTAACAA
CagtcaaaatgacaaaaatacctCTGaggatgaaaacaaagaagtACAGG
CTCACTATTGGTCATGGCTTGTACCCACCCTTCTTTTCATTCTTCTAATT
GCTGCTATGATAATTGTATACAAAAGAAGACAAGAAAGCATGTAAGTTGA
AGTTTTGatacaaaatgaaattttgatttaagggctctgaccatcacagg
aaaaaattttcgatttccaaggttggaaatttcaagttttcttagttgga
aaaaagataaaatccaatggaaaatccaacctgaaaatgtgtGACATTGt
ccaaggttggaaatgttgcattttccatggctcggaatttttgaaaattc
agttggaaaaaagccaaaatccaagcttaaacaaggttggaatttttaaa
aaattcagttggaaaaaagccaaaatccaagctttaacaaggttggaatt
ttttaaaattcagttggaaaacaAGGTtggatttttcgaaaatctaggtt
gaaaaaagccaaaatccaaatttaacaaggttggaattttcgaaaatcta
ggttgaaaaaagccaaaatccaaaaagtgatggcagatatgtggaaaaga
gatcttaagCAAGGttattgtttttgtgaacagtcactcgctagcctagg
ctcgatggctcccggtcaatctctcgtttttgttcgcacagatacgtggt
tgatacagaggaatgtaaagagatggaaaaacagcttttctgattactca
aagttcaacgatcacttctattgaaaactctattgtaaaaacgttgatta
ggtcgtTAAATgtaagtccagaaaagacggctcgccatacaaattggacg
gtttctacatgatttaacgataaaaatgaaaattagtttttcctttttcg
ccgattactagttcaatttttaaaaataaggagCAAtctttttaccaatg
tatagcaaaagaaattcttaacgcaatgatattaaattgattcttgtaaa
actgtcaaaaatcgagtaaaatcaagataaagttataattttctcgagct
ctagctctCCATAtaggtgcggtcatgatgcggttatatcagtagaatcg
ctaagAAATtttgagcaagaagatataggcaccttttcgtataggagagg
tgtacccaaaatatgagccctaaaagtttgcgcataattaGGCTTGAAAC
agaagaattttgtcacaacacgctaattatgcagattttttaaagcgaca
acaaaagaaacctattaactcgacataaactcccttaagggcaagagacc
tggtaaatgacgagccgtttttccattgttttcaagaagctgttttccat
ctctttacattcctctggttgatattagatcactcacacagctcagcagg
gcgctatttgaaaccatgacacaagtaccctatgtgcttcactgtgcgaa
ctcactgcgatttaCCGAGGCCGCTCCTAAgcgacgcctcacctgacgga
atcttacagcttgactgctcacattatagtcTAGTATCCAGGTttgctat
acatcaaaacagttttgagcgaaaaatcgcttgtggttttctcaaaggag
catgcgcagaaaatggttagaaaaacgtaatttccacatggatttttaac
gttttccaaactgtttggagaaacacaaatttccaacccaaaaagtctag
ttttccaatcgaaagggtttcaatttcataaaaatgtaatttccacatgg
atttttaacgttttccaatctgtttggagaaacacaaatttccaacccaa
aaagtctagttttccaatcgaaagagtttcaattgcataaaaatgtaatt
tccacatggatttttaacgttttccaaactgtttggagaaacacaaattt
ccaaccaaaaaagtctagttttccaatcgaaagggtttcaatttcataaa
aatgtaatttccacatggatttttaacgttttccaatctgtttggagaaa
cacaaatttccaacccaaaaagtctagttttccaatcgaaagagtttcaa
ttgcataaaaatgtaatttccacatggatttttaacgttttccaaactgt
ttggagaaacacaaatttccaacccaaaaagtctagttttccaagaaagg
gtctcaatcttagaaaaatgtaatttccacatggatttttaacgttttcc
aaactgttcggagaaacaaaaatttccaacccaaaaagtctagttttcca
atcgaaagagtttcaatttcataaaaatgtaatttccacatggattttta
acgttttccaaactgtttggagaaacacaaatttccaacccaaaaagtct
agttttccaagaaagggtctcaatcttagaaaaatgtaatttccacatgg
atttttaacgttttccaaactgtttgggagaaacacaaatttccgaccca
aaaagtctagtgtTTCAAcctgaggtatcaaatttacaaaaatatgtatt
ttcacatcgatttttgaccattttttttcaatttccaaactgtttggaaa
ataaaaatttcccacccaaaaagtcatgttttccaaccagccttggaaaa
ttgtcatttctacattgtttttttttcacttgatttttcaagcgcattgg
tttattctacaaaacctatgggtaatttacgttttccaaatcactttaaa
gtaatcgctcaaatttccaaccttcaattataaaaccaaaatttccaacc
caaaaatatcgaatttccagccttggaaatcgaacattttttcctgtgca
tagtccaaaaattgattttggtatttgaacataaaagttatatttcaggt
tccttaacacttttaacaaagaattgcctttataaattgctttttaatcg
aatcacTTAAGAGTAAtttagaatttaattgcaaaaatgacgttatgaac
tttaaaaagatgttaataatatgttgcatcaccctcttttacaaaaagtg
cttagttttaatgggtaattaacttttttgtttcaaaatttctttacact
gtccgcaaagaattgaactattttaaattttgtggaaaatttttgtaaaa
agatgtgtcaaaagttatgactgtttttttaagcaaaatccagatgtaaa
attgatgaaaaaccactattttgaaaatttcgagacaaagaagcatttac
aaaaattttccgcaaaaatttttattgttcggtaaaagatacaccatcta
ctgcgaaaattttttcaaaatgttttttcttcgccgaaactaagctcttc
aaagttgaaatactcttccttgcaaaagtcttcattttcttcttcatcaa
attttttcaatgcaatttttgaattttcagattcaggaatagtttgtcta
acagaaaatgtataacgtgccctagttttgttggttacatcagtcagaaa
acacattttaaacaaggcaattatgaaaaattcactatggtcagagccct
taacaagCACAAAATAAGGTCAAACGTGGGGCCACTCGAAATTACTCTTG
ACTTTATTCAACCAAAAGTAATTTCAAAGATGTGAATAACTTGAATACTT
TTTGAATCAGGACTTTGTCTCAGTCCGAGTTCTAGAACAAAGCAGTCTTC
TCaatagcgtagacaagaggggtgcaaaatttgtggAGGAGGGCagattt
gcctaagtaccctccCCGGGCCCTATACAAATTTTGTCTACTCTACTGAT
TTTGCTCTTACATTTAAGtagggaaaattttcgaaagataaTCCTATAAT
TAGCTTACCATGCAGGCCTGTGTTATGCAGggggtgtcgcaccgcccctA
GATTACACTGAAAAACATTTTCCGCTCAATCATTTCTAAGCATTTTAACT
GTACAAAACTAACTAACTTTGTTAACATTGCATAAAATTTAACTGAATGA
TGGAAGTTTTCTTGATGCCTTGTGTCAGCCATATATATTCTCTTTAGACC
AAGTGTATCTTCTTTACCGAGTTCTTTACCACATTTTTCAGCTACAAGGA
GACATTATTAGTCGACAAATCACCCGTTCAATATAATAGCCTGCAAAACG
AGGCATACAGCAGCCAAAGCTTTGATATCGAAGATGGAAAGAGACTCGCC
GATAAAGCATGAATATTCAGTTTTATGGAACTTGTCTTACCTAGTAACCt
tttttttACAACACATGGAAAAATAGCGCCTTTTTTAGCCTGTGTTTTTG
ACAACGAAGACCGTTAGTTTCTGGTGTGTCCGGGTTTGTCTGGGTATGTG
CCGTCCTTAAGGGAGATTTTTTGGGACGTGTTAGGGtcgaaaaaatagtt
tttcactCACTTTAGTCACTCCGGCGGGCGCTAAAATACGAAGATTTTGG
CATGCCGAAACTACAAAAATGTACTTAACAACTCGCTAATGAATATATCA
AGCAAACGCAATTTGCAAAGACAAAGATCTTTTTTATTATGccccccccc
agtggtttgcgtgaatttgtaaaaattttagTTGATAGTAGCCATGGTTA
TTTTCACTGGGATGatttttaagttattgtaaattttgttttaaaaattt
agtaattcttttataatttcattgtttCCAGAAATATGTCTATGATTATA
AATTTGTCATCAAATAACTCTTTGTTGTTTGAATTTCTTTGTGCTTagtc
tcaaaaattcaaaaaatgcattATCTTGGAAA Coding sequence (CDS) from alignment at sc0000127_pilon:506788..514519+ >MSTRG.14893.1.p1 ID=MSTRG.14893.1.p1|Name=MSTRG.14893.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4356bp|location=Sequence derived from alignment at sc0000127_pilon:506788..514519+ (Clytia hemisphaerica_ch_hm2_pilon)
ATgagtattttaaaaatgttgattttaatACCACTTCTATCAATTTGCAG
TCTTGCAACGACTGCTGGAACTAAAAATGTGGAGCCTAAAGGagcCCATG
TATGTCAGAGGCTAGAAAAGTACGAGACTCAAGAGCAGCAGACAAACACT
AGACTGGTGTCAGAGAGTTACAGATACTGTTGTGAAAGATTTCTCTTGTG
TATGAAATACTGCAGTGGTGTAAGataTCGAACAGTTTCAACAACAAAGA
ACATACCAGGTCATGGTCATCGCATCATAAAATATTGTTGTGAAGGATGG
ATTCAAAAGGACCAAGAATGTATACctacTTGTGATTTTCCCTGTTTTCA
CGGGACGTGTATTCAACCAAATTTTTGTGGTTGCGTTGAAGGTTATACTG
GAAAATCATGTGAAAAAGAGATACAAATACCAACTCAAAAACCAGTGGAC
AAAGATTCTAACAACagtcaaaatgacaaaaatacctCTGaggatgaaaa
caaagaagtACAGGCTCACTATTGGTCATGGCTTGTACCCACCCTTCTTT
TCATTCTTCTAATTGCTGCTATGATAATTGTATACAAAAGAAGACAAGAA
AGCATCTACAAGGAGACATTATTAGTCGACAAATCACCCGTTCAATATAA
TAGCCTGCAAAACGAGGCATACAGCAGCCAAAGCTTTGATATCGAAGATG
GAAAGAGACTCGCCGATAAAGCATGAATgagtattttaaaaatgttgatt
ttaatACCACTTCTATCAATTTGCAGTCTTGCAACGACTGCTGGAACTAA
AAATGTGGAGCCTAAAGGagcCCATGTATGTCAGAGGCTAGAAAAGTACG
AGACTCAAGAGCAGCAGACAAACACTAGACTGGTGTCAGAGAGTTACAGA
TACTGTTGTGAAAGATTTCTCTTGTGTATGAAATACTGCAGTGGTGTAAG
ataTCGAACAGTTTCAACAACAAAGAACATACCAGGTCATGGTCATCGCA
TCATAAAATATTGTTGTGAAGGATGGATTCAAAAGGACCAAGAATGTATA
CctacTTGTGATTTTCCCTGTTTTCACGGGACGTGTATTCAACCAAATTT
TTGTGGTTGCGTTGAAGGTTATACTGGAAAATCATGTGAAAAAGAGATAC
AAATACCAACTCAAAAACCAGTGGACAAAGATTCTAACAACagtcaaaat
gacaaaaatacctCTGaggatgaaaacaaagaagtACAGGCTCACTATTG
GTCATGGCTTGTACCCACCCTTCTTTTCATTCTTCTAATTGCTGCTATGA
TAATTGTATACAAAAGAAGACAAGAAAGCATCTACAAGGAGACATTATTA
GTCGACAAATCACCCGTTCAATATAATAGCCTGCAAAACGAGGCATACAG
CAGCCAAAGCTTTGATATCGAAGATGGAAAGAGACTCGCCGATAAAGCAT
GAATgagtattttaaaaatgttgattttaatACCACTTCTATCAATTTGC
AGTCTTGCAACGACTGCTGGAACTAAAAATGTGGAGCCTAAAGGagcCCA
TGTATGTCAGAGGCTAGAAAAGTACGAGACTCAAGAGCAGCAGACAAACA
CTAGACTGGTGTCAGAGAGTTACAGATACTGTTGTGAAAGATTTCTCTTG
TGTATGAAATACTGCAGTGGTGTAAGataTCGAACAGTTTCAACAACAAA
GAACATACCAGGTCATGGTCATCGCATCATAAAATATTGTTGTGAAGGAT
GGATTCAAAAGGACCAAGAATGTATACctacTTGTGATTTTCCCTGTTTT
CACGGGACGTGTATTCAACCAAATTTTTGTGGTTGCGTTGAAGGTTATAC
TGGAAAATCATGTGAAAAAGAGATACAAATACCAACTCAAAAACCAGTGG
ACAAAGATTCTAACAACagtcaaaatgacaaaaatacctCTGaggatgaa
aacaaagaagtACAGGCTCACTATTGGTCATGGCTTGTACCCACCCTTCT
TTTCATTCTTCTAATTGCTGCTATGATAATTGTATACAAAAGAAGACAAG
AAAGCATCTACAAGGAGACATTATTAGTCGACAAATCACCCGTTCAATAT
AATAGCCTGCAAAACGAGGCATACAGCAGCCAAAGCTTTGATATCGAAGA
TGGAAAGAGACTCGCCGATAAAGCATGAATgagtattttaaaaatgttga
ttttaatACCACTTCTATCAATTTGCAGTCTTGCAACGACTGCTGGAACT
AAAAATGTGGAGCCTAAAGGagcCCATGTATGTCAGAGGCTAGAAAAGTA
CGAGACTCAAGAGCAGCAGACAAACACTAGACTGGTGTCAGAGAGTTACA
GATACTGTTGTGAAAGATTTCTCTTGTGTATGAAATACTGCAGTGGTGTA
AGataTCGAACAGTTTCAACAACAAAGAACATACCAGGTCATGGTCATCG
CATCATAAAATATTGTTGTGAAGGATGGATTCAAAAGGACCAAGAATGTA
TACctacTTGTGATTTTCCCTGTTTTCACGGGACGTGTATTCAACCAAAT
TTTTGTGGTTGCGTTGAAGGTTATACTGGAAAATCATGTGAAAAAGAGAT
ACAAATACCAACTCAAAAACCAGTGGACAAAGATTCTAACAACagtcaaa
atgacaaaaatacctCTGaggatgaaaacaaagaagtACAGGCTCACTAT
TGGTCATGGCTTGTACCCACCCTTCTTTTCATTCTTCTAATTGCTGCTAT
GATAATTGTATACAAAAGAAGACAAGAAAGCATCTACAAGGAGACATTAT
TAGTCGACAAATCACCCGTTCAATATAATAGCCTGCAAAACGAGGCATAC
AGCAGCCAAAGCTTTGATATCGAAGATGGAAAGAGACTCGCCGATAAAGC
ATGAATgagtattttaaaaatgttgattttaatACCACTTCTATCAATTT
GCAGTCTTGCAACGACTGCTGGAACTAAAAATGTGGAGCCTAAAGGagcC
CATGTATGTCAGAGGCTAGAAAAGTACGAGACTCAAGAGCAGCAGACAAA
CACTAGACTGGTGTCAGAGAGTTACAGATACTGTTGTGAAAGATTTCTCT
TGTGTATGAAATACTGCAGTGGTGTAAGataTCGAACAGTTTCAACAACA
AAGAACATACCAGGTCATGGTCATCGCATCATAAAATATTGTTGTGAAGG
ATGGATTCAAAAGGACCAAGAATGTATACctacTTGTGATTTTCCCTGTT
TTCACGGGACGTGTATTCAACCAAATTTTTGTGGTTGCGTTGAAGGTTAT
ACTGGAAAATCATGTGAAAAAGAGATACAAATACCAACTCAAAAACCAGT
GGACAAAGATTCTAACAACagtcaaaatgacaaaaatacctCTGaggatg
aaaacaaagaagtACAGGCTCACTATTGGTCATGGCTTGTACCCACCCTT
CTTTTCATTCTTCTAATTGCTGCTATGATAATTGTATACAAAAGAAGACA
AGAAAGCATCTACAAGGAGACATTATTAGTCGACAAATCACCCGTTCAAT
ATAATAGCCTGCAAAACGAGGCATACAGCAGCCAAAGCTTTGATATCGAA
GATGGAAAGAGACTCGCCGATAAAGCATGAATgagtattttaaaaatgtt
gattttaatACCACTTCTATCAATTTGCAGTCTTGCAACGACTGCTGGAA
CTAAAAATGTGGAGCCTAAAGGagcCCATGTATGTCAGAGGCTAGAAAAG
TACGAGACTCAAGAGCAGCAGACAAACACTAGACTGGTGTCAGAGAGTTA
CAGATACTGTTGTGAAAGATTTCTCTTGTGTATGAAATACTGCAGTGGTG
TAAGataTCGAACAGTTTCAACAACAAAGAACATACCAGGTCATGGTCAT
CGCATCATAAAATATTGTTGTGAAGGATGGATTCAAAAGGACCAAGAATG
TATACctacTTGTGATTTTCCCTGTTTTCACGGGACGTGTATTCAACCAA
ATTTTTGTGGTTGCGTTGAAGGTTATACTGGAAAATCATGTGAAAAAGAG
ATACAAATACCAACTCAAAAACCAGTGGACAAAGATTCTAACAACagtca
aaatgacaaaaatacctCTGaggatgaaaacaaagaagtACAGGCTCACT
ATTGGTCATGGCTTGTACCCACCCTTCTTTTCATTCTTCTAATTGCTGCT
ATGATAATTGTATACAAAAGAAGACAAGAAAGCATCTACAAGGAGACATT
ATTAGTCGACAAATCACCCGTTCAATATAATAGCCTGCAAAACGAGGCAT
ACAGCAGCCAAAGCTTTGATATCGAAGATGGAAAGAGACTCGCCGATAAA
GCATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000127_pilon | genome | sc0000127_pilon:506788..514519 + |
|
