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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000179_pilon:525566..531204- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.17613.1.p2 ID=MSTRG.17613.1.p2|Name=MSTRG.17613.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5639bp|location=Sequence derived from alignment at sc0000179_pilon:525566..531204- (Clytia hemisphaerica_ch_hm2_pilon)
TAGATGTTGTGTTCATGTATAAGGTGAAGAGTGCTTTGAAAAAACTCGAA
AGTGATAGTAGTTACTACACGTAAGCGAGTAAAGTAGTGTTTTTCAATTA
ATAATGGCAATCTCTAAGAAAGTGGGTAAGTTTGTTGGAGTATATAAACT
TTTATATAAAAGGGCGTGGCCTCGATGCTAATTAGGGAAATTCCCTTTTT
TAGGATTCAAAACACAAAAATTGCAAAGTTTGGCAAAGTTTGGCTAGTTC
TCAGATCCCTCGTTGAATTTGGATCAATTTCTAAACACCTCATCTTATGA
CCGGGGAATTTCCCTAATTAGCATCGAGGCCACGCCCTTTTTGTCAATGA
ATTTTGTCCACAATTATAATCATTGACATGTCCGGTCATAAGATCAGGTG
TTTAGAAATTGATCCAAATTCAACGAGAGGACTGAGAACTAGCCAAACTT
TGCAATTTTCGTGTTTTGAATCCTAAAAAAGGGAATTTCCCTAATTAGCA
TCGAGGCCACGCCCTTTTTGTCAATAAATTTTGTCCACGATTAATCATTG
ACATATCCGGTCATAAGATCAGGTGTTTAGAAATTGATTCAAATTCAACG
AGGGGACTGAGAACTAGCCAGACTTTGCCAAACTTTGCAATTTTTGTGTT
TTGAATCCTAAATAAGGGAATTTCCCTAATTAGCATCGAGGCCACGCCCT
TTTTGTCAATAAATTTTGTCCACAATTAATCATTGACATGTCCGGTCATA
AGATCAGGTGTTTAGAAATTGATCCAAATTCAACGAGGGATCTGAGAACT
AGCCAAACTTTGCCAAACTTTTCAATTTTCGTGTTTTGAGTCCTAAATAA
GGGAATTTCCCTAATTAGCATCGAGGCCACGCCCTTTTTGTCAATAAATT
TTGTCCACGATTAATCATTGACATGTCCGGTCATGGTAAGATCAGGTGTT
TAGGAATTGATTTAACCTCAACGAGGGGACTGAGAACTAGCCAAAGTATG
CAATGGGCTGGAAATTTGAATCCTAAAAAGAGGAATTTCCCTAATTAGCG
TCAAGGCCACGCCCATTTTTATATCAATTTTTGTCAAGAACTGCTCTATG
TTATGTAATCTTTCAAGATCTTTTGGTTTGAAGTCAATATCTTTTTTCAA
TTTTTTTTTACAAAGCTTTTTAGGGGCTTTTTACGAATCCTGAATCCGAA
TCCGAATCCTTGAATCCCAATCCTACAATCCAGCGAATCTACCCTTCTTT
TCTTGAGGAAATATGTTCTAAAGATGGTCAATTCTTTCAAACAGAAGATG
AGATTGAATTCTCAATGAATCATTTTCTAAGGTCTAAGATTTATAACAGT
TGACACAGGGACAATTAATGTTTCCTTTTTTTTTGGAATCAGCAAAGTTC
AAAGTATACTCGTGTTACATACATTATGTCCCTAAATGCAATAAATTCGG
CGCAAAAAAAAACTGAGGGACTGCATGACGTCATAAAACTTAAAACCTTA
AAGGTTTTGTTTTGAAGTACAATTCAACATTTTTTTAAAAGATCCAGTAG
ATTTTTTATGAGGCTCACATTTGTTCTTATCCTGTTCTGAGGTATTCAAG
GATTTATACCTAATTTTTACAAATTTGACCCCTAAATTGCTTGAAATTGA
GTAATTTCAGGCTCAGCATCGTTCTTAAACAGTTCTTATTTTTGAGCAAT
TTTTAGCCTCATTGTTCTTATAAAAGGAAAAAGTGTGTAAATATGAAATT
TGGTCCTTTGACAGGTATTCGGGATCCCTAATTTTCGAAAAAAAATGACG
AAGACAGCAGAAATCGAACATTTTGCTAAAATTTCTTGAAAGAATGCAAG
AAAATAATTAACAGTGATTTTTGAATTTCTACATCCTAATACGCTTTTTT
TGAAATGTAAATGACCAAAGACCCTCAGCTTTCTGCGCCAAACTTATGTT
CTTTTTGGGATATGTGATAAGTAAACCAAAGTAAAAAGTTTTTCATCCTT
TTTTGAGAATTCCCTCTTAAAAATCATAGCGTATGAAATATTTTTACAGC
AGTAGCCAACTTATGAACATTAAATTGTTGAGATACGAAAAAAGTAAGAG
TTAGTACACTTGTGAAATACTTCAATTGCGACCCATACAACTTGTTTTAG
TCAGTTTTTTTTCAACCTTATTCTTCATCACTTTGTTCAGTTTTTCCATT
TAATTGTTCGTCACAACATTCTATATTAACTGTTCTCCTTTTTTCCTTGC
TAGTTTTCATCGGAAATCCAGGCGTTGGAAAAAGCACTTTGCTAAATTGT
TTACTGGGGCGGAGCGCATTCAAGAGTGGCGTTAACATCGCCACTGGAAT
TTCATACCAATTGCAAACAGAAGCTGATGAAGTGAGGGGCGTCACTTTTT
GTGACACGCCCGGTCTAAAAGATGTGGCAATGCGAAACAAAGCAGCTATT
GCAATCACCGAGGCGTTGAAACAAGGTGGAGAGTTTCTCGTTACGTTTAC
CATCACTTTGGAAGCCGGAAGAGTCAAACCAGAAGATATTTCCACCATCG
AAGCGGTTGTCAAGGCAGCCCCTGAAATTAGGGACTTTGGTTTAGTGATC
AATAAACTGTCGAAGAATCTTTACAATCGTCTCTCATCGAACGCTTCTCA
AAAAGAAAGTGTCATCAAAGAGGTCACAAAATCCTTGACATGCAATCAAC
CCTCTGTTCTCCTTCTACAAAACAACGATAATCTTGAAGGTGAAGAAAAC
GCTCACACCAATTTACCATCTTTGTCTGATTTTGTGTTCCGTACCATGAA
ATCTATCGTTATTCACACAAACAATGTGCAAGATGTGAACGCTGGTCAAC
AATACAATGTCGCTTATCAAAGGGAAATGGCAGCTAAAATGAAGGCTGAA
AAACAAGAAACCGAGCGCCTTAGAAAAGAGAGAGAAGAGGAGGCTAGGAG
ACAGGCTAGACAGCGTCAAGAAGCGGAGGATAGAAGGAGACGACAAGAGG
CTGAACGACAACAACGCGAATGGGAATATGAACAACAACGGAGGAGGGAG
CGTGAACGAGAACAAGAAAGATTACAACGTGAAAGAGAGGCTAGGCAAGC
AGCAGAACAAAGAAGGCGTCAAGAGGAGATAGAAAGAGAAAAAGTGAGAC
AACGACAGGAAGAAGAAAGGCGTCAACGCCAACTAACATACCAACGCCAG
CAAGCAGCCGCCCGCGCACGTGATGACGGCTGTATTATATTGTAGTATGA
AATAAGAATAAATCTTTTTTGTTAAAAAGACTTTTTGTCACCCATATACT
TGTATACACCTTATTTACTCAAGGTAAGATGGAACATTTAATGTTCAAGC
CCAAAATTGAATGACTTTTAGCCAAATCCGAGAAAATAGCGAGTTTATGT
ATCTACCCTTTGAGAACGAAGTCTGAACAACTCGCAGTTGTGTCCCACAC
GATCGAGGATGGTAAAAGCACTGATTCTTCTCCTGAACAGGATTTTGAAA
AAACGTTTCCGCTGCAGAAACCAGTGTATATAAACTGGCTAATTTCATTC
AAGGTGAAGACAAACAGTAGAATTGTAAGAAAATAATAATATAAGTGTTT
TGTACAGTTCTTAATGAATTTCATTTCATTTTCATAGAAAACAAAAAATA
AAAGTGACAAAGAAAAAAAAGATCGAATAAACAATAAAATGGAGAAGAAT
GGAAACAATCACAGCGAAACAAGAAGAAATCCATCAGGTATATAAATCAA
TTGTTTATTCATTTTCCTTTATAAACTAGAAAATAAGCCCTAAGACTAAG
AATATGAATTCGTTCTTCGTACATCATACTCCCGAGCTTATTCGGTATTT
GTAGCGGCCGTAGCATGAAGGTAAGCTACGGTGGGCAAGGTTGTGGGTTC
AATCCTCAACCGGTCATATCAAGACCTTAAAATGCTACTTGGTGCCTCTC
TACTTGATACTCAGAAATTAAAAAAAAGGGTCAAGGGTGAGAGGAGAAAT
CTAGGGAAAGGAGAGGCGACAACAAGAGACAAGGGAGCCTACGGGTCACC
CTCCACTGCAAAACTTACTTACTAGTAGCTAACAGCTGCAATTCAGTATA
AATTCTGTTTTTATAATGAACACGTTTGAAAGAACAAAATTCAGTGCTTC
GGACTATTTCCCCAAAACCTTCTTCAACACAAAGGTAATAAATCTGGAGC
CATTAGACCTGCAAACACTCTTAAGCAATGCCTTTTCTTTAGGGAATGGT
GCCACAAACAGAGAATATGTCTTATTTGCTGGTAACCCGGGGAGTGGCAA
AAGCACAATCTTGAACTGCTTGATGGCATCAAGAAGTCCAGACCCTCTTC
ATGAAAGCCAGAGATTCAAGTCCGGTGTAGCTATTGCATCAGGGATGACG
TACCAACTGGACAAGAAAGAAGTTTGTGGAGTTACTTACATGGATACTCC
AGGTCTGGATGACGTCAATAAACGAAAACAAGCTGCTGAAGCCATCACCA
AGGCTTTGAGAGAGAATGGAAAATATCAAGTCATTTTTGTGGTCACTTTG
GAAGCTGGTCGAGTGAAACCGGCAGATGTGGCAACCATTCAATTGATCCT
TGAAAGTGCAAAAGAGATAACTCATTATGGTGTCATTTTCAACAAGCTGA
GCAAGCCAGTAATGAAAAAGCTGACGGCCAAAGACGGCAAGATGGCGCTG
ATCACTCAAGTATCTATTCAACCAGAAAAGGGAAAACCGAAGCCGCTACC
ATTTCCTTTGTTTTTGAAGAAAGATGGTGAACTTGAAGATGAGGATGATG
CAGTTGCTGAATTCCCTGAACTGGATACTTTCTTCGGTGGGTTGCCTTAC
ATTGACATCAAGAAAGAGAACGTCCATGACATCCCAACTGAAAGTTTTGA
AGCTATGAAAAACAAGCTTGAAGATGCGCTTGACCACATGAAGAAAGATC
GAGAGTCCATGAAACGACAAATGGACGAAGATCGAAAAAACTTCAGACGA
ACACTTGAAGAAATGAATAGAAAAGAGCAAATGGAGAGAGAGAGATTCGA
AAAGGAGCGGGAAAGATCGGAGAAGAATCATGACAGTCAAATGGATATGA
TGAAAACACAAATTAAAGAAACAAAAGAACAAGCAGCCAAGAGTGAGGTA
GCATCGCAGAAAAGCCATGAAGCTCAGATGAAGAAAGATCAACTTGATCA
TGCGTTGGCAATGAAACAATTGGACCAGGCACATCAAAGAAGAATGAAAC
AAATCGATAACAACAAAAGAAGAGGATTCTTCAGCTTTCTATTTGGCTGA
TATTTCTTTCACATTCCTGTGGACTAACAAGAAAAACTATTTTACAGTTT
ATATTTACTTCATACGAATACCATTTTCTTACAATAAAATGTCAAAAGTA
TACTCACCATTGATTTCTAAAGCCCTAAGGGCTAGATGGCGTGCTTCGGC
TAAAAAGTGTGCCGTGGTTAGGTAGAAAATCCTACCTAGGTCACGTGACA
TTACATGAGAATTTCAGCGCTTGACCAATCAGAAGCTTCGCAGGTTTTCG
AAAACAATAGTAACAATATTTTTTCCGATAATCATTTTTTTTAGCCTGCG
ATGGCTTAAAGCACGGCAACTAGCTCTTCGGGGCTTCGG Coding sequence (CDS) from alignment at sc0000179_pilon:525566..531204- >MSTRG.17613.1.p2 ID=MSTRG.17613.1.p2|Name=MSTRG.17613.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2028bp|location=Sequence derived from alignment at sc0000179_pilon:525566..531204- (Clytia hemisphaerica_ch_hm2_pilon)
TTTTCATCGGAAATCCAGGCGTTGGAAAAAGCACTTTGCTAAATTGTTTA
CTGGGGCGGAGCGCATTCAAGAGTGGCGTTAACATCGCCACTGGAATTTC
ATACCAATTGCAAACAGAAGCTGATGAAGTGAGGGGCGTCACTTTTTGTG
ACACGCCCGGTCTAAAAGATGTGGCAATGCGAAACAAAGCAGCTATTGCA
ATCACCGAGGCGTTGAAACAAGGTGGAGAGTTTCTCGTTACGTTTACCAT
CACTTTGGAAGCCGGAAGAGTCAAACCAGAAGATATTTCCACCATCGAAG
CGGTTGTCAAGGCAGCCCCTGAAATTAGGGACTTTGGTTTAGTGATCAAT
AAACTGTCGAAGAATCTTTACAATCGTCTCTCATCGAACGCTTCTCAAAA
AGAAAGTGTCATCAAAGAGGTCACAAAATCCTTGACATGCAATCAACCCT
CTGTTCTCCTTCTACAAAACAACGATAATCTTGAAGGTGAAGAAAACGCT
CACACCAATTTACCATCTTTGTCTGATTTTGTGTTCCGTACCATGAAATC
TATCGTTATTCACACAAACAATGTGCAAGATGTGAACGCTGGTCAACAAT
ACAATGTCGCTTATCAAAGGGAAATGGCAGCTAAAATGAAGGCTGAAAAA
CAAGAAACCGAGCGCCTTAGAAAAGAGAGAGAAGAGGAGGCTAGGAGACA
GGCTAGACAGCGTCAAGAAGCGGAGGATAGAAGGAGACGACAAGAGGCTG
AACGACAACAACGCGAATGGGAATATGAACAACAACGGAGGAGGGAGCGT
GAACGAGAACAAGAAAGATTACAACGTGAAAGAGAGGCTAGGCAAGCAGC
AGAACAAAGAAGGCGTCAAGAGGAGATAGAAAGAGAAAAAGTGAGACAAC
GACAGGAAGAAGAAAGGCGTCAACGCCAACTAACATACCAACGCCAGCAA
GCAGCCGCCCGCGCACGTGATGACGGCTGTATTATATTGTAGATGGCAAT
CTCTAAGAAAGTGGTTTTCATCGGAAATCCAGGCGTTGGAAAAAGCACTT
TGCTAAATTGTTTACTGGGGCGGAGCGCATTCAAGAGTGGCGTTAACATC
GCCACTGGAATTTCATACCAATTGCAAACAGAAGCTGATGAAGTGAGGGG
CGTCACTTTTTGTGACACGCCCGGTCTAAAAGATGTGGCAATGCGAAACA
AAGCAGCTATTGCAATCACCGAGGCGTTGAAACAAGGTGGAGAGTTTCTC
GTTACGTTTACCATCACTTTGGAAGCCGGAAGAGTCAAACCAGAAGATAT
TTCCACCATCGAAGCGGTTGTCAAGGCAGCCCCTGAAATTAGGGACTTTG
GTTTAGTGATCAATAAACTGTCGAAGAATCTTTACAATCGTCTCTCATCG
AACGCTTCTCAAAAAGAAAGTGTCATCAAAGAGGTCACAAAATCCTTGAC
ATGCAATCAACCCTCTGTTCTCCTTCTACAAAACAACGATAATCTTGAAG
GTGAAGAAAACGCTCACACCAATTTACCATCTTTGTCTGATTTTGTGTTC
CGTACCATGAAATCTATCGTTATTCACACAAACAATGTGCAAGATGTGAA
CGCTGGTCAACAATACAATGTCGCTTATCAAAGGGAAATGGCAGCTAAAA
TGAAGGCTGAAAAACAAGAAACCGAGCGCCTTAGAAAAGAGAGAGAAGAG
GAGGCTAGGAGACAGGCTAGACAGCGTCAAGAAGCGGAGGATAGAAGGAG
ACGACAAGAGGCTGAACGACAACAACGCGAATGGGAATATGAACAACAAC
GGAGGAGGGAGCGTGAACGAGAACAAGAAAGATTACAACGTGAAAGAGAG
GCTAGGCAAGCAGCAGAACAAAGAAGGCGTCAAGAGGAGATAGAAAGAGA
AAAAGTGAGACAACGACAGGAAGAAGAAAGGCGTCAACGCCAACTAACAT
ACCAACGCCAGCAAGCAGCCGCCCGCGCACGTGATGACGGCTGTATTATA
TTGTAGATGGCAATCTCTAAGAAAGTGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000179_pilon | genome | sc0000179_pilon:525566..531204 - |
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