XLOC_010538 (gene) - C. hemisphaerica

Overview
NameXLOC_010538
Unique NameXLOC_010538
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000309:72275..76660+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010538 ID=XLOC_010538|Name=XLOC_010538|organism=Clytia hemisphaerica|type=gene|length=4386bp|location=Sequence derived from alignment at sc0000309:72275..76660+ (Clytia hemisphaerica)
AAAATCCCTAGATTGTAAAGTTATTTCTTCACTACCTAGgaatttgaatc
ttttttccTGTGTACAATTCAGAATCATCTGCTCCCATATCAAAAGAAAG
CGTTCAAATTTCATTATCAAAAGTGAGTCTAATTTTATACAATCCTTACA
TCAAGTTTGACCAATAAACctcgatttgaaattttttcttttctcacaGG
AGCATGGAATTGTCATGAAGGGTGTCGAATGTATTGCTTACCTTCTTGCA
AATCCTCTTGTTGCAAACCAGGCGCACAAGATTATCATCCTGATATGATG
CCAGGTAAGGATCTTtcgttcaaaattttaaatttattaaaacATTTATA
TATAActctaaaaagaaaattttaatggAAAGTTTATCGAAATAATGTCG
CAAAAAAGATGCTTATTTGTAGTTGAGTACGGTATCCATAAAGGACGACT
CTCTACAGTAAGATTCAGAAATTGTTCGAAGGCAAAATAGCGTCTTAGGA
GGAACAGGGAAAGAAATTCGGGTGACGGAAACattaaatttataaagatt
ccAATGCTATTATTCCTAATGTTCTAAGGAACATAGATTAATGAGGATGG
ACTAAAtaaatgttggtttgccgtcagccgacCGACTCTCCTCTAAACTT
GCCgacccaaaaacttttattgcTTTTTTAACTATTATTTGCTACaaaga
gaattttcaaaattcttcaaaattacaaaatgtagacaaaaattccatga
atgaccaaaacaaaaaagaaatttccgaccgaccgacccacctccaaaat
ctagggtcgggtgacgacAAAGCTAGAATTCCAGCCTAAAGTAGCTTGCG
ATAAAGGTCATAGGatttttttgacattgaaaAGCCAATAAATCTAATCT
CagtaaaattaataaacgatTTCAGCCATCGAGAAATATCAGAAAAGACG
TGTCTTAGAAGCGAAGAAACAACAGATTGCAGGAGCGGCCGATCCGTATG
CATGTGGACAATTCTGTTCACCGACGTGTTACGACGGTGGGTGCTCATCA
GGTAGGTGAAAGAGAACGagatatacaccttttcgaccgtagtcgcgcgg
tcaggcgcatgtcacttaattatttaattatccccttAAACTCGATCCAA
TCCTTTTTTGACAAATTTTTCTATTGTCTATAGGTGCGAAAAAAGGACTG
TGACGGTTTTAGTGGGATAAAGCAGACAAACAAATACCCGCGCGGTAATT
GGCGGCTATTATCGAAAAGGTGTATTATAGGCAACTGAACAAACATTTCA
AATACATTTTGGATAATCTTTGACGGTTTTAAGTAAAAACCCTATTATCG
ACTTTCAAAAACAATGAAAATATAGTGCTTGTCAAAAACTATTACCCAGA
TGAAAATGGACGGACTACAACTTGTTGGTGAAAGAAAGTAAAACCAACAT
TATTTTTTATCAATAGCATGTTGTAGCGGTCAAATGCAAATCCAACCAAT
GCCGATGATGCCACAAGCTCCGGTGATTCCTGGATGTGTCCCAGAATGTA
TGCAAAACCCTTGCATGGAACAATGCCCGCCTCGTGAGTAATAATTATAT
CTGTttttttttctgaaagagctCGAGTTTCAAATGACATAATGAtaggt
caaataaaaaaaacttaaaaaaaagaagtatTACTTAAAATACATAATCC
CGAgtgaagaaaaaacaacattattTTCTGCTCTTAGAATGTGGTTGTGA
TCAACAACAACCAGAAGCTGCAGAACCACCGCCACCTCCACCACCACCGC
CACCACCTCCAAGGAGGCCTCGTCCACCACCAAGACgcccaccaccacca
ccaagGCGCCGCCCTGCACCCGTGCGATGTGATCCTAGTTGTGAAAAATT
GTGTCTACCATCATGTGATTTCACTTGCTGTATCCCTGAAGGTTTGAGGA
GCACCAACTTCGCACATGCTTCACAAGGTATTGAACTAAATTTATTGCAG
AACAATCATTAGATTCTTTTTCCTTTTCGATTGAAAAATGTAAGTTAATA
TCGCCTTATCTATGAAGATGATAGCAACAACTACATTATGGTACATTGAA
CTATATGCTGTCAACCTTCTTTCTTTGAACATAAACAACTACCACATTTC
CATTTCAGGGTTCATCCCTACACAAGAGCAGAAAGCGCCACCTCAACCTC
CACGCTCAAGACCAGTGGCCGGAGGATGTTCAGGAAGTTGTTCAAATGAT
TGCTTCCCATCGTGTAGTAATGACTGTTGCTCCGCTATGTCATCCGCACC
CATGGCTCCACCATCCGCTTTGTCAGGTTGCCCTGCTCCATGCCCCTCGT
CATGTGCATCAAGCGGCTGTGCACCAAGTTGTTGTGGTGATATGGCTCCA
CCTCCAATGCTACCACCAATGCCACCACCACAGACTTGTCCATTAGGTTG
CAGCAGCGCATGCGCACCTGCTTGCACACCACAATGTTGCTTTCCTGGTT
TAACCCAACCAAATCTATTACTACCACCTGCACCACCTCCAATGCCAATG
GCTCCACCACCAGCAATGCCTATGGCTCCACCTCCAGCTATGCCTATGGC
TCCACCACCTGCCGCCCCTGCACCATGTGGACCACAATGTGCCGCCTCAT
GTGCACCGGCATGCACACCAAACTGTTGCACGGGTGTTCAAGTCGGCCCG
ATCATCCCTCCACCGCCAGTCCTCAGTTGCCCTTCACCATGTTCACAAAG
TTGTGCACCCAGCTGTACACCAGCATGTTGCGCTAGAACCTCACCCTTCA
TCCCTTTCGCACCTCTTGCTCCACAACCACAACCTTCATGCGGTACTGGA
TGTGCTGCCTCATGTGCACCCTCCTGCTCTGCATCCTGTTGTGGTGCACA
AGCTCCCCCTCCAATGATGGCTGCTCCCCCAGCGCAACCCCAATGTGGTA
TGGGATGCTCTGCTTCCTGTGCACCTGCTTGTTCTCCTAGCTGTTGTAGC
CCACCACCTCCTCCACCAGTTATGGCAGCACCACCACAATGCGGAATGGG
TTGCTCAGCCGCTTGTGCACCAGCATGTTCTCCAAGCTGTTGCGGTGCTC
CTGCTATGCCACCTCCTGCTATGCCACCTCCAGCAGCTTCCCCATACACG
TGTGGAGCTTCCTGTCCTGCTTCCTGTGCACCAGCATGTAGCCCTGCATG
TTGTAACACAGCGCCACCTCCCCCACCAATCCTCATGGGAACACCTCCAT
CAGTTTGTGGTGCAAATTGTCCAGCCGCATGCGCACCTGCTTGCAGCCCA
TCTTGTTGCAGTGGTGTACAACAACCACCACCTCCTCCGGTTGCCATGCC
AGCCCCTGCAACTACAACATGTGGTGCCAACTGTCCAGCTTCATGTGCTC
CTGTCTGTTCACCATCCTGTTGCAGTGCTCGTGCACCACCTGTAAATTGC
CCTCCATCATGTCAACACACTTGTGGACCAAGCTGCACATTGAGCTGTTG
CGGTCAACAACCACCACCAATGCGTATCGTACACATGCCACCCATCTCCA
TCCAACTACCAGCTGCCCCACCTTCATGCGCTGGCACCTGTGCATCCTCA
TGTGCACCAGCTTGTACACCAACTTGTTGTGCTGCTTCAATGCCTCCTCC
ACCTCCACTAATGCAATGCTCTACCGGATGCCCAGCTTCTTGTGCTCCTG
CATGTCTACCGTCATGCTGTAGTGCTACTCCTCCACCACCTGCCATGCCA
GCAGTAGGTCAGTGCTCGTCAGGGTGCTCTTCTTTCTGTGCTCCAAGTTG
CACACCTGAATGTTGCGCTTCTACTGCAGAAATCGATGCAATGGACAGAG
AGATGGATAAAGCAGAGCAGCAAATGTCGAAGAAAAAAGATGCAGAGAGC
ACTGATAAATGGGACAAACGAACAAAAAAACTGTCTGATGACAAAAAGAG
AAGTCGTATCTTAGCTGATGACCGCAGAAGAAGCCTCATTCGACACTAAT
GTGTGGTAGTCAGATATAGATAGAACTTTATTTTACTGTCTGATATCAAC
AAAGACAATACTGTGACATTAAGTTTTGTTCAAAGATCTTGAGAGAGAAA
AACAACGATGCCGTAATAAGACCATCACTGTAGAATGCAAACGTGCAAGC
TAGAGACATTTCAAAAAGTTAAGAATGAAATTTTAATGCTTAAAGTCAGA
TGTCATTAACAGGGGTGTCCAGTCTAAGGTGCAATCAAATGTAGATTTTA
TAGATTTTTTTTATTTTGATAGATCCTTTTTTAAGGGTAATTAGATGTAT
TTTTATATATTTGTTTTAAAATGTAGTTGTAGTTTTTAGTGTTTTGTAAA
TTTTATTACAAAAAAATAAATAAAAACAAAACCCTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00018809TCONS_00018809Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00018809-proteinTCONS_00018809-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000309supercontigsc0000309:72275..76660 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.05	0.06	0.03	0.06	0.02	0.07	12.96	16.19	10.17	13.14	13.27	6.36	20.81	20.68	12.26	45.29	29.85	26.67	0.03	0	15.63	16.7	7.56	9.45	16.27	19.99	1.15	0.54	0.03	0.02