XLOC_010257 (gene) - C. hemisphaerica

Overview
NameXLOC_010257
Unique NameXLOC_010257
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000295:5326..11727+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010257 ID=XLOC_010257|Name=XLOC_010257|organism=Clytia hemisphaerica|type=gene|length=6402bp|location=Sequence derived from alignment at sc0000295:5326..11727+ (Clytia hemisphaerica)
TTCTAATTCAATGTGGTTTAAAAGTTTCAAGTGAAATGATGAACCAAGAT TTCGAAGTAAACTCTTTTTGCTTTCACAGGATATTGGTGCTGGCAAGGGG AAATATTATGCTGTGAACTTCCCATTACGTGATGGTATTGACGATGATGC TTATGAAAAGATTTTCAACCCAGTATGTACTGAAATTAGATCAATCTTCC CATTCCATACAAAAGATATGGCCTCATTCTCATCAGAATTTatgaaacta taataaaaatgctaaaatacctCCAAACTTTGAAAACAATCGATCCCTTG GTCATACTTTTCTCTTCGTTTTTCACCAAAAAGAGACTGGATCTAGTGAT AAAgatttgctaccacctcaagcaaagctaAAAACTCGAATAGGTGCACT GGGctacttatcagcgccatccagtctatcaaagaAGCCCCCAGGCTGGG GGATAGTGACCTCCTCCCGTACTATGGATCAGTATGGATATATTTTTCGA CGTTCtgaatttttatcatattttcgaAAATGGAAAATCTGTACGATGCA ATAATTAGAATGAtttctttatcattttcaaGGTATTAACCAAAGTCATG GAGATGTACCAACCAAATGCTGTCGTACTACAATGTGGTGCTGACTCCTT GTCTGGTGATCGTCTTGGTTGTTTCAATCTCTCTTTGAAAGGACATGCAC AGTGTGTCGACTTTATTAAGAAATTCAACTTGCCACTGTTGATTTTGGGT GGGGGTGGATATACCATTCGTAATGTTGCTCGATGTTGGACGTATGAAAC CTCAGTTGCATTAGAAGTTGATATTCCAAACGGTAAGTGGCAACACGTTG ACAAATTTTGATCGATTTTGTGCTATTTAAAGTTACTACAGTACTATAGG ATTTCAAAAGCCTCCGTCAAATTAAGCTCAATACTGGCTTGGTCATCTGA TCTCTGATGTAGTGAAATAGTGTTATTCTTATCAAAATTGAAGGAGATGC ACCAGAAACTCTCAATTATGAGCCGAATATTTCATGACATTAACTTAGTG ATTAAATTAACACTCAAAATAGGCTCTTGTTAATCCTGTAAATCTAGAAT CCTTTAACATCATCCGTCGTTACAGGAATCTTATCTTTTTTCTAATTTCC TTTCTCTTCAACTACAGAATTACCTTACAACGACTATTTCGAATATTTCG GTCCCGATTTTAAACTCCACATTCAACCTTCCAACatgcaaaatcaaaac actCCCGAATATCTCGACAAAATCAAGTAAGTCATTATAAAGAATGAAAA CTAACCAGGAAGGAAATTTCAATCGTAAAAGTGTTATCGTCTTTAGTTAT ACAGGTTGTACCAGGTTACAGCTTGCCCGGTAGCAGGGATCTAGATGGTG CTTCTACTGACCTGACATAAGATATTCTTCCCGAACTCAAATCAAGCGCT CACTCGATTCAGTGTGTTTCAACGCTGAGAGGATGTTGTTCTTGAACAAT GCGCTGATGCTTTTGAATAACCATTGGCTTTTGCTTGGTTTACGAAAGTT GGGGAAGAAACAAGGTTGGGAATTACTGTGTTGGAACATCTCCAATTCTC TAAGCTTGAGAAGGATTTTACTGTGTCAGGAAAAGcgatttaaaatcttc atacatTCTGATTGGTTTGTTGGGATACGGTCACCGTATTTTTAGCTGAT TTCGTTTCAGCAGTTTTGTATACGTTTTCTTGAGGTCTTGGACTTATTGC GAGAGTTCCTTATTGATAAACGACTTTTGTGTGATTAAGTTAGCTTGTTG GTCAACAAGAACTTCCAAAGATTGGATCTTACGATCAGCATTGTCCAATT CTTGGAACATTTCGGCACTTAATGTCTTTATCGTGTTTACGCGTTCTTCT TGTCTTTGACATCCATATAATTTCAACAATCTTTTTCTCGCTTTCTACGT GCTACTCTTCCAAGTCGCTCACCTTCTGAGTTTGATTGTGGAGTTTTTCC TCGAAAACTTAGGCGTGTTTTTGATTTTATGCATACTtgcattcattttt ttcattttggcgaGTTGTTTGCGCAAGTCTTCGATGCTTGTTTCACGCCA CGGCCGATTATAAACTCCAGTTTCGCTTGTTTCCTTTTTCGGACCGGGTT TCAATTATCAGCATAAACTTTCTAACCTCATTCACGTCTCGGCTTGAGTA GGGGAAATCCTCTTAAGTTTGAGATATTGGACTCTTCTCCAAGACAACAT AGACCTATACGATTTTTACTGTATGATCAGAAgtttattttcaactcttt cCCCTTTGTCTTTAGAACAAGGTTATTCGAAAATTTGAGAATGATTCCAC ACGCACCTGGTGTACAAATGGCTCGTAAGTAGTTTTCGTAGCTTCAACTC CAAGGAAATGTTGTTAATAATAAAACCCATTTTTAGCCTTAAGCCTTTTG CTGCCCGATGCATAGAATATTTCCGACCCTGGTAAACGTTAAGGTTTGTG ATAAATGGCCATTATATCTGAATATTCCCAGTATCCATCACTCGACATCC CCAGCGCAACTTTTACCActaagttttcttttcaacagCGATTCCAGAAG ACGGAGCACCGGAGGAGAGCGACGATGACGATAACCCAAAGAACGTTGAT AACAGAATCTCCAGTAGGTTATCCCCGCAAATCAACTCTGTTAGCTGAGA AATCTCATTTTCTAGTCCAAGAATGATGCGTTATGCCCAATCTTGATCGC TAAAAGGAAAGGACCGAAAGTCAATAGTGACCAAGAAAATTTCTTGTTTA GTACCTTAGCCCAAAATCATGACTTTTCCCATATTGCCATTGTTTTGCTA ATAAAAACTCTTGTTACACAATAAAGCATTGTTGAGATTATATTTCTACT TGTAACTATCGCCTGAATACCAAACACGgagtaaaaaaaacaactaaatA ACCCCTTTTCTTTCCATGTCACAGTTCGTTCATCTGACAAACGTATCGCG AACGACGGCGAGTACTCTGATTCGGAAGACGAAGGTGAGGGACGCCGTGA TGAGAAAAATCATAATAAGAGTCCACGCAAGAAGCTACGAACGGCAAGCC CCATACAAAACATGGTTACTGACGCCACCAAGAAAGAAGAAACACCCAAT AGCGACGCTAAACCTACCACTGCACCAGCGGCTTCCGTACCTGTTGCAGA TAAACCACAAAACGGCGCCAAAGCTACCACTGAGGAACCGGTAACGAAAT CAGAAACGCCAGCTGCTGTTGTTACTACTACTGAAGAGTAAGAATCCATC TATTTGTTCATATTTACTCATACATTTAACTTTTTAAAGgatctttgaat tttttgtataatGTTATCTTGCTACATTAAACCCCGAACTTCTATtaatc gaatctttctatagttCGAACTTGACAAGTTCCTGACAAGGATAAAAACT ctcaaaatactttctataattcgaatctctctgtaattcgaaaaatacgg ttccccgttcgagttcgaattactAATATCATGCATGAATTTAATATAAA CACTGGATGAACAACGCATGAAACGGTGGAGAACGATGattgtatttcca ttgtttcagaaaacaatcgtgATTCGAGCTGTGTCCGCAAAAGACAACTG TCCTGGCGGCTCAAAattctctgattttgaaaaatgattaaatgaTCACA TTTCTAAAAAGTCAATTATCTTTATCTTCTTGATCTTTTACTcgccgaaa attgaaaaataaaaaaatcaacggATACATGTATTGAATCTGTtgtgaca aaaacatcattagacaagagaAATTAAACGAAAGGCCTAAAGTGGTGATA ACTGAATTTTAAGTGGGCAATACCTTTCTAACAATTTTCCGATTAGAGCT AAGATAGACtagacctctttttaaattacctcacaaacatcacttgcctc gtattcaaacaattaccgtGGTGATTATgtctatgattttttttgtgaat aNATTTATAAATTAcctcacaaacatcacttgcctcgtattcaaacaatt accgtGGTGATTATGTCtatgatttttttgtgaataggaagtagttttaa taaaatccgctgggactTAATCACCATGGcgataatttcaaaacgaggca agtgatgtttgtgacgtaatttatgaaaaggtctgaCATTATATCAGAAT TTAGTGTCTCTGAAGCTTTGTAGaggttaaaaattgaaaatttctggtAT CAACATTGAATTTCTCATGCATAGCATGTTTTTTGTGTCttttgaaacgt cataacgacacaTAAATTAGCGATTATTTTGATGTGTTTGCCTCTCTAAA GAAAACTTTAattctcatttgggaattgaaaNAAATTAGCGATTATTTAA TACTCTTTTGCAAATTGCCAAATCTTCCAATTTACCTCCCCTCTTTTTGT CCAAGCCACCCCctttatttgaaatttccacaaacccccttcttttaaat tcagtaaaattctcaacttttttcaaGGGAGGGTGGGTGCCCACTATTGA CAAGGCTAGATCATGAGGAATCAATGAAAACCTAGCTTGTTGTTTATCAA GTCAGTGTCTATATTAAATTCATGGTGATAGTCAACTGTACTTGGAAGTT CAAATTTTTTAGATTCTCAGccaaaaaccgtttttttttcattgaatttt ttttttcatcaattctaGGCCAAAGAAAGAGGAGAACACTACGGAAGATA AGAAAGCTTCTCCGACTGAAGAAAGGTAATCCTTCTTGTTAGTCTAATTT CATTATGGCACATGAACATCAGATTGCGTTTATTTAAGTCATGCTAACTA TCATTATGTTCCATTTTCGTTTATTTAGTAAACCAAGCACAGAGGAAGCA AAGACAACAGTAACTTCTCCTGAAAAGATGGATGTTGATAAATCACCAGA AAAGAGGTAGAATACTTTACTATACcttttaaataaagaaaacGTAATAT TTGTCTGTCTATCTgtatttgcttgaaaaaagtaTTTAACTTCTCTTCTA TTCCCTACTTCCCTAAAGTTTCTATATTCTGGCTGACTGGCTGGTATTAA ATTATTTGATCGTATATATTCTTTTGGGTGGGTTATTCTGTAGAACTTTT GGGTCAAATAGTAAATAATAGAAAAATCttttcaggttttttggacgttt ttaaaaagttcaacACCCATTCAGAAAGGCAGCTATGGTCACGTGCCGTT TCTGATTGTCATCGTTAACAGTTTTCTGTTATTACTATCTGATATTTGTG GATAGGTTAATTGACTTATCATTTGCTTTGGTTTTCAGCGCACCTGAGGC ACAACCTAAGGCTGAGGACAAGAAAACAGGTAAGATTCATCATTCATTAT CAAGTTTTCGTCCTCAAATTTTGTAACTATTTGCAAGTTGACCGACAATG AGTAAATACTCGAATAGCGTCTGTTTATTCGGCATGGCATTGTTTAATTG AACAACAATGAGTTTTCTAAGTAAACAAACAAGTTGTATTTATGAATGGG CGTCTGAGAGATTTGATCGTAGTATTACTATGGCAAAACATCAATGGAGA AAGTCTGCTTTTAGAAAATAGCTCAAACCAAGAAATGTAACTACAAGACA TTTTTAAATCATAGATTTTCCATCGATTGACTGACAATGAAACGtaagtg ttttgtttttgttttaaacttATAATTGCTTCGAACTTTTTAGAAACTCC CACAGCGCCCACTGCTGAAGGTGAAACTGCTAAACCAGCGGAAACGACTC CATCAAGCACTGTCGAGAAGCCAGCAACAGGCGATGATAAAACCTCATGA GAATAGTTACTTAGCTATAAAATCACATAGACTCAAACAAGAAGAGTCAA TTGTTTATGGGACGGTATTGTCCTTAGGATTACATCATACACCGTGTTTT TAAAGCTGTAAATATTGGATGACCACCGATGTACAATGATTGGTCATAAT GGATGTCAAACATGAAATATAGCCGGACTGAAATCGTGTCAAATTATAAC TATGAACGATAATCTAGTAGTAGTCTGGAGGAATGGATAACGAATACAAA TTGACGCATTTTTATAATACCATttttaaatgttaaattatttAATGATA ATGTTAGGTCGAAGCTATTACTATATCATACCATCAAAATATGGGCATAT CTGGTTTCACTATAAAAGGGCAAAGACGTTATCTTCGCTGCGTTTTCAAT CAAATAGTTTATAATTTATACTTTTAACACCATACGGATTTGACAATTTG GTGGGTTTAATAATTTTGACGACCCATACGTTTTACAAATTCATTTTGTA AGTACGAGTTTTAATCGTTGCAAATATAACACCATCATTTATAACAAGGA AA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00018246TCONS_00018246Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00018246-proteinTCONS_00018246-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000295supercontigsc0000295:5326..11727 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
314.68 309.53 586.09 581.75 507.7 405.57 178.95 186.7 130.17 132.98 123.81 112.59 136.41 139.66 117.31 116.29 167.14 155.74 48.11 47.14 83.36 81.49 153.68 154.04 146.93 167.07 67.75 56 86.59 87.29