XLOC_010226 (gene) - C. hemisphaerica

Overview
NameXLOC_010226
Unique NameXLOC_010226
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000291:230867..240208+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010226 ID=XLOC_010226|Name=XLOC_010226|organism=Clytia hemisphaerica|type=gene|length=9342bp|location=Sequence derived from alignment at sc0000291:230867..240208+ (Clytia hemisphaerica)
ATTAATTCGCAGGTcaaattaaaacaaattcatTTTCACACGCCCTAGGA TTATCTTGGCAGGTGATAAAgcaaagtgaaaatattatcgatataaattt ctttcatttattcatattttaacAAATTCTTCTATTAGTGATAATTGAAT CAAACCTATTCTACGTTTTTAGGCGCGATTTTGAGGAACTGTTAGTGTTA CTTAGATATATTTGCGTTCGAGggattcatttttcaaaacaagatTAATA GGGGCAAAACATGCTATATTTACTGATTATCGCAGTTTCTATTTCTAAAA GTACATCACTAATAGGTAAGTATGCAACTGTCATTGTAAACGTCTCTATC TATAACtgttattgttttgaatttattgtATTCGAATCAAAAGAACTGAG AAACCAAGCAACTAAGACATTCTTCAACACATATTTCGTCAACTGACTTA AAGTCCGTGATCGTAAGTCTactatgaaatttcaaaaatgaattcgCATG GAAACTACTTTAatggtagaaattttagcgagactaattttagcgtatat tagcgagtcaagaaaatcttgatttttttggatttattttagcgaattac gatttcaaaaaaattcgcgtggattaattttactgaatactcgtattaca ttattgactgaattcgttttctagcatttctttgcactgaaacccttcct attgataaaaatgcatcaaggcaatataaccagaaatttggcgcggataa attttagcgatctgtaaatttggcgtgttttagcgagattttttttagtg aaaatagggaaaactcgctaaaacgctgaaattagtctcgctaaaattat ttaaaagtatTTCTAATCAAAATTATAGATAGAACCAGTTAGAGGATTTT GAGAGGTCTTGGGAGAATTCACCTTTAACATTCCCAGGCTAAACTCGGAC TGAACTCGGTGCCAGTCCGGTAGATAGGTTtaccttgaaaaaaaaacacg gaTGAAATTTGGTAGCCCCTTGGCACAGTCTAAAGTAAATTTCAAGGCCG ATCTTTTGAGATTGGttagaaaatttaaatcttAATGCTGAACAGCTCTT GACATCACAAGAAAAATTGCAGATTGGGGAACATTAGGAGTCTAACAGAC AAAATGAACACTATTTCCTTTAGAAAgaacagggatatgttatagcggag ctggatgaaggacgagaattccttagcagattgcttctttgtcttttcta ttgtaaactgttgataatagaaatccatctctgtccccttgagtgttctg tttttataagaaaaatgaagcagacaaagtattcatgcagtacgtttgca tatattttgctatgatgttcccgcttttcatcaaaataatatttgcaaaa gataccccaaaagctcctttgtaaatgaaatctaattttatcagcCTGTG tcatgaatttgagaagctttcatgatttctctttaaaaatttcggatgta aataNttgaaattttttccataatcagacataccgacttgctatctgaaa atatcagttagaaagtgaggcaccccgcggtgtagcgcggtatttcaaat gaaaaagtactatttataatcttacagaagaaatttcttataagtTTANN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNaagttaaatttcatatcaaattttaatgtcagggac agagatagaacaaggcttttttaaatgtgcgttatccagctccgctataa catatccctggaaAGAACTACTTCTCGCAATCTTTTAGATAAAACCgtcg aattttttttcaaaactcttaACAAAAGTCTTATTTTAAATTACAATAGG ACCTTGTATGATCGATGACTCACGGATCATATCTGGCACAACTTATCATA TCTCATCATGTTTATTTTGTCAATGTGATAAGAACACTCAACAAGTGTCC TGTTACAAGAAGGAGTTTTCAGGTGCGGTTCATAGGCTATGTGAGGATTG TAGAAGTCTACCGACAAATGTGTCTTGCTCCTACTGTGAAAAGCCTAACA ACGCATCAGTTCTCATTCCAGTTGGCAATCCTATTGAAATCGAGAATGCA CCAGGTTGCATTTCATGCAATTGCTCACTCATAGGAGACGTATCTTGCTT TTACTACAACCACACATTATGTGATAATAGACAGTCGTGTCGTTTTGCTT TAACCGACAAAAATATGGATCGTTTATCGTGTAGTAATGGCTGTATTGAT CCTTCAAGTGGATTTATGAGACCAGAAGGAACATGGGAAACGAAGGAGGG GATAAAGTGTACCTGTTTGAAGTCATTAGCTAGTTGTTTTCATATGAAAG AGTTGGGAGGTTACATGTTTGTAACAGGTTGTTTACCTACTCAATGTACA CCAGAAAAATACAATGCATTATACGTCACTGGCAAAGGTATGTTTTAATC TTCACAACATTCTCTGCGAGCTGAAGACAATGGATTTTCTATTTTCCATC GTTTTGTCTtaatcatagaggtataaagaaagacaggagatgaatttgtc ggtaattggtcgttaaagtcttNaagttctttataagcacacacaatttc agacccaacttgtagacaaaaagtcgctggagaattttggaggaaagtat taagcaatagagttcaccttgaagaacatgttgatcgaaaaatcttatca tttgatgaaggattgccaagtttacaggcccttttttagtccaaatactt tcttacactgatgtcagaaacaatgaatctcgtctcatcttatttccgaC ACTtgagttagccaataagatttcacctatcaacaaaagagctcattaaa aatgcacgatatatgagattatgagcatgcatacctcgtaatttttttaa tcgtagggtgagcatggttacaatagcatacttactcctgtttctttata cctccatgtctTAATTAAGTGGTAATTCCACCGAGGCATTGAGACAGTAG TGTTTTATATTAAAGCTAACATCAACTTATTAAGCTATTATAACTCCCCA CCGATCTCCAAATTGTGCACGAATGTCCAACTTGTGCAACCAAGACCGAA TAATCTTCATTTAGCACTTTGATATTTCCCTTTCCACCCACATAAAAGGG AAACGGAACCGTCATGTGCGAACATGGTCAACATGGTCATAGGTTTAGGA CATTTTTCGCATTTAATTTAAGATTGTGAATTCAACGGGCAAACAGTCAA GCACGGCACGACCAGTTTTGCTCAAGTATACAATCTCAAAGGGTGTTTTC AATGTACTTGTTATGCTGGAGCTCTACAATGTGAATCTAAAGGCTCGTGG ATGGAAGGGAGCTTTCCTACTTTCGAATTCCATGCCGTGGTGCTTCAATG CTCAAGCGTTGAAAAatgcgaaaaagaaaaatcaagtccTGCGATAAAAA AATGTAAGTAATATATtcggcttttccagaaataaaattataaaatttgt aTATGGAGTAGTGGAGCCCGTCACTGGTTTTCTAGGGTCCCTAGACTTAA ATGCGCTACTGTTGTCGCTTTTCCTTCTTAATGTCAAAAAGGTTTTCTCA CTAAATAAGACTCTGTTTCTTGAACTTTGAATTTTCTGACCATCACCACT GAATGTTGAGCTTTGTAGTCCCAAACATCCCTTTAAAAAGACAAGCTTTC TCATTACAATATAGAGATCTAACATATACAGAtgacaatatttttcaact gaTATTCATAACGATTTAGATTGTGATGCAAATCCAATAGAAAGACAATG TAAAGGTAGTTATGTGTGGGATACTGACTTCTGCAAGTTAAATTGTACAA AGTTAGGTCAAAAACCGACTTATGAGCTGACCAGGAAGACATGGTGCAGT GCTCTTCCAGAGCTCAAGAAAAAAGATTGCGACTTCTCATGTCCAGGTAG GTTGCTGTTCATTCTTGGGAGTAAAGTAAGTATTTGAAGATATTTCATCG ATCTTATAATATACCCTgcgtcacagacccgctgggaccccagccccacc aTTCGTCCTCGGTGGGAAATACCCTGAGATTTAAGCCCCGCTGGGAAATT GAATTtccaattcaaaattcaatgcttaaaaattgaactCCAAAGTATCC CACTAGATCTTTTaaccttagaacaatagaatttctatccccattgggat ttcaatagaaatttttatcccattgaggtaaaaagttccaccgggctgtg atacaggggtgttataaTGTTTGAAGAACAGAATCTGTGAACCATGGCTT GAACGAGAAATTAGTCAATTGGTCGGAAACTAGTCTCTCGCCAATGGGAA GCCTGTGGCAGTAtaggggggcgtacggtatttcggaattgcggaaatcg acgcTTTCTTCTTCGACATTTCGGAAATCGGgaaaaattccttcggtatt tcggaatgctGAAATTGTGTCGGTATTGGAAATCCATGAACTTTTGCTTC GGAATtttggtattataaagtttttactctcctttttcggaattcatact ctcggatacctaatagccgggggagTTGGAAttagcgggggggttggaaa aaatctcaaaacttaataagcatggtgttggaataaaaatgtcctgggtg gaaaatttttgaaaaggaggctaatacagctgaattaggacaaaaaaggg aactttcaaaacattttcccaaaaattaataagcggggggggggggttga aataaaaatgtcctggggggaaaatattcgaaaaattaattagcgggggg ggggggggaaataagaatgtcctggggggaaaatattcgaaaaattaatt agcggggggggggggggaaataagaatgtcctggggggaaaatattcgaa aaattaattagcggggggggggggggaaataagaatgtcctggggggaaa atattcgaaaaattaattagcggggggggggggggaaataagaatgtcct ggggggaaaatattcgaaaaattaattagcggggggggggggggaaataa gaatgtcctggggggaaaatattcgaaaaattaattagcggggggggggg gggaaataagaatgtcctggggggaaaatattcgaaaaattaattagcgg ggggggggggggaaataagaatgtcctggggggaaaatattcgaaaaatt aattagcggggggggggggggaaaaaaaaatgtcctgggtggaaaatttt tgaaaaattaattaggggggggggggggttgaaataagaatgtcctgggt ggaaaatattcgaaaaattaattagcggggggggaggctattaagtaccc gagagtacatgaaaaatctaatttgataaaaaaattagtCGAAACGAGGA AAAACACCCAataaaatcggtatcggaattgcaagtagaTAATAATTGAT TTGTATCTTAATAGAATTACACTGTCGAGTAAATCTTCgtttgaatattt caaacaaCATTAAGGTTTCTTAATATGTCAAAACACTGTATGCTTTCAGA CAGACAACTTTATATGAATATGTTTGGGTCATCTTTGGTATCGTGCAATT CAACAGATCAAATGATTTGGAAAGATCAAATTTGTGATGGAAAACAAGAT TGTTTGAACAATGATGACGAAAAAGATTGTGAAAATTGTAAGAGATATTC TAATACCCCGCTCTGGCAGCAGGGACCTGAGATGAGAGGGAATCTGAATT TTACAATGGATAAGTTTGACTCAgattcaaagattttgctttaaTTTGTG AAAGAGTGACCTTGCAAAGGGCTTTAAAGCTTTTTACTGCTTTCAATTGT GTTACTTTTCGGCTCACtatagaagaaaatttttcttctCAAAGTTTTTT GTAGATACTCGTTTGATCATAATCAAGTGTTATGGTCATCTATTGCTGTT GAAGAAACACAAGAGATTTCATGCGATCAAATtccttatttaaaaagaaa ttattcaaaatatggATTAAAAGGTAGAATTATCAACTTATTATATACAC CCTTTTCTGTATCACACGTTTGGTAAACTATTTGGGGACGCAAAAGTGCT CAAGTTGCTACATTTGCCTATAAGCTAATATCAAAATCACAAACAAAGTG ATTTAAGTGCTGCTAAATAGAAAACGTCTCGTCTCGCCTAGAATTTTTTA CTTATCAAGACCGTTCTTATCAATGCTTGTAGGAAAGATGTTACGAAAGT GCAattggaaatcgaaaatgtgGACGAATGAAACGGAATGGGATAACAAG ATCGATTGCCGATGCACCATCGACGGTTTCCCATCGTTTGATACGGTCAG TAAAACAAATGAAAGTATATTAATTCAAACATCGAACGAACTATAGACAG GTTTAGTATAACTTTCTTCTGGAATATCAGGAGTAAGTAGAAAATGTTCA ATATAAGGTAATGCAATTTCAGGAatataaaaactttcaaaagctggtgg aaaaaagtaataattgttttgtttttttcagaaCGTCAATCTCACATACG ACTCGATTAGCAACGATATGGACCGACTTTACAATCATTTTAATATTTCT CCAAGCAACATTCAACATTATGAAAAAATTGTTGACTTGCTCAACATCAC ACTTCAAAAGTTTCAATTCGACAACAGCTCCGAGGGAAATTTCGTTTACC AAACTACTGAATGGCACGAGAAAAATGATCTAAatttatataacattttt aaaGTAAGATATCATGTTAACCGTAAATGGGAGATAAAAACTTCTAATGC ATTACGCCCTAATGAAACACCCAAGcgttcgaaaattatttctacCCACA AACGCACTCATTAGCCGATCTATAGCTCGTAAAGATCTTAATCTccaagc aaaattaaaaaaatgcatgaatatttttcagagagctgcaaaaatgaaga ctacAGGACGTTTTTGTGATACAGATAACCAACAAATGGACACGTTATAT TTCAAACTGCATGAGGAGTACAATATGTAAGTAAAGTCTTGAATGAGCCA TAAGATGAACAACAGCCCGCTTTGAAAAAGTACGGTTAACAATCTTTCGT AAAAAACCTTTATTTCTTGgttgaaaatggtaaaaggtgCCAAAAAGGAT GATTACAATGAAACTTTTTCGCTCCTTATATTTTGTCTTATCAAGGTTAG CTGCTGGAGGGGCCACTTCCCTTTTCCCACATCAGACCACACTACCGTTA AAAATATTGTGATTGAGCTATGGTAGATccttcaaaaaactttcaagcct tttttttttttatctatttttagtCCTTTCTTCAACTACAGTTTGTTTAA ATCATCCTTTGTTAAAGCGCTTGGAGCAGAAAATAAACTTATACGAAAAA TGGTGAGATGAAGATGCTTCACAATTCTCGTCCCCAGCCACTATAATATT TAGAAAACGTAAAATGTAGAAGTAGCAAAtatagaaaacagaaaaatgaa gcgactgcttgtgtagaaattttcgtcatctttcgtgacttcatcagcat atAGCTCAACAATAAATGATATATGATATTTAGAAAATAGCTTTGTTTTT CTATTACAGCTTCAGATGAGAAAAGATAACTTGATGCAAAGAAAAGAAGA GCGGATACATCAGGTACCAAAACAGATAGACTGATCCCTTTTTGACTTTC ATGAGCGCACGATCAGTCATCATTCCTAGAAATGGTAGTAAGAATATGTA CATATTTAGTCAAAAATTTAGGGTAATTTAGTCACACCTTGATTAGCTCA AATTTGTGAATATTTCCCGTTTATACCtggtttgttttttaatgagattT CAAGACAATATGTCAACtaagaaaaatgtaatttgCCGTAGCAAAATAAT TCTAAAGTATAGAGTTTCGAGAACGAGAATGAGTCATGACAAAAGTTTGA TTTATATTAGGTTCCTACAATCAAGACCAATATAGACAAACTGGAAGAAA TTTTATCAGCGATCAGCATTTTTTGTTTGGCTATCGGATTGTTGGCTTTC CAATTTGTCAGGTATCGTTTCTAGAAGAATAATCATCATTTTTTAGAAGT GGTTTTATACTTTTATTTGTCAATTGTCTGTGAGTATCATATACCTATGC CCAAGTCCTCGTAGGACCACTGGGAACTTCGACCAAAACTTTCCTTCTGt gagaaaaaatcaaagttttatCAACATTGAAAACAACGCGTTACTGAACT GTCATCTACGCTAGATTGTTGAGACGTAATCGAATGAATCTCGAATCTCT CCTCGTTGAACAGTAGATCTTCCACCCTCACTTCTTCCGCTCTCACTTGC GCGAAGTCCTTTTTTTCGCCACCTTCGGCTAAAATGACGTCGTTAATGAG ACAGAGGTGTAATATATCGCTTATGGAAGAGGGAAATCATACAACTTAGC AAACTTGTACCCAATActttaaaatattctgaaattctactttttgtCGT CCTAAGCGATAAGGTAATTAAAGCAGATCTTTATCGGTAGCTGTTCTACC TCATAATGACAACCAATACTGTTTCAATATTTTCCAGGAATAAATCAATG AAGCTTTTTATTCATAAGAATCTTATACTATCATTTCTGTTGAATGCAAT TTGTTACAAAATTCCACTTTGGTTTGTTCAAAATCTTCGTGCTAAGTCAA aggtaaaatttgtaaattcgACCAATCGACCATCGTCACGTAAAAAAAAT GAGAATGCACCtgcattaaaataatttttttaactttggaaaaCTAAATT TACTACTATAAACATTTATGTAAACTCAAAATCTCCAATAGAAAAAGACC TAAAGATATCGAATCCTTTCCTTAAAATTATATATTTCAGGCTGGTTGTT TTACAGTATCGGTTTTGTCGTACTTTTTCACTTTGTCAACATTTTCATGG ATGATGGTTGAAGGAATCAATATCANGTATCGATTTTGTCGTACTTTTTC ACTTTGTCAACATTTTCATGGATGATGGTTGAAGGAATCAATATCATCAt cattgttgtttttgttttcaaaggaAATCGAAATTACCACAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00018197TCONS_00018197Clytia hemisphaericatranscript
TCONS_00018198TCONS_00018198Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00018198-proteinTCONS_00018198-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000291supercontigsc0000291:230867..240208 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.42 1.43 0.71 0.54 0.23 0.14 2.83 2.63 3.63 3.16 3.46 3.4 0.55 0.63 0.82 1.12 1.3 1.33 1.11 1.51 2.21 1.73 1.28 1.01 0.28 0.52 0.45 0.53 0.83 0.72