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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000156_pilon:172180..175325+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.16478.1.p2 ID=MSTRG.16478.1.p2|Name=MSTRG.16478.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3146bp|location=Sequence derived from alignment at sc0000156_pilon:172180..175325+ (Clytia hemisphaerica_ch_hm2_pilon)
ATTTTGGAATTCGATACGAATGACGTCACACTTGTGGAAGAGAAGACGCA
GTTTTCACACCTTTCTCTAACCAACCAATCAAACGACGGCAAACAGAACA
ATGATTTCACCgaatctaaaaaatatttcaaatacttCAGCAGTAAAATC
GTACGGTTGACAGGTAAGTCTTTATTAAAGCCGTCCTAATAAGTGGGCCC
AAGGTTGTTAGTAAGTctgtgaccgcagtcggaggcgacccaaaggctgG
GGGCCGTGGTTCTTAATCTTTCGATGTTTTCCATCCCCCGGACCATTCTA
GgatccccccgtttattaatttttggaagtATTTTCAGCTGTCGAAAGAa
gagtcccttattttgctctatatGACCAAGGTTTAGTCTTTACTTGTGGG
GGCACATTTTTCAACCCCCTGTAATTTGGTCTCTCCTTTTATTTCCATTT
ATGCAATTTTCGGGTAAAGAGTTTTCCTTGTACGTACATAAGTAAGGCTT
caagaatttttataaaaaaaaacgatcCTATAGTTCGCTCTGTTTTATTT
CTTTCATCTCTAAAAGtgaacgatatcatccaccaaaTGGTGAAAAATTG
TAATATTGTCGTCATCATTGACTATTTAATTGGCGAATGTATTGACTATC
ACAGATGGAAACTACAAACTATTTTCGTTTTGAATGAAGTCATCAAATCT
AGCCAGCAATTAAAAGGTAattacgtttttttatgagaacaacaACATAA
AAAATAGTTGggtttctttaattcgaatctcttagctctagtttaatcgg
ccgactttctgccctgcttattctaattgttagagtaggcaaaaagaggg
cacaaagttggttgttaaaatctttgcttggaaaggtttgaaagaagaca
ttgccattgacgtcaaaagaaggctatgcatcactttagacagcccactt
tatgccctctttaattcacaattagaataggcagggcaaaaagtgggccg
tctaaactagagcttatactcgaatgtctcctcaaGTCGAACAAGCTTTC
TAGTCCCTTCAGTTAGCACGACCTTACTGGGTATATCGAAATTCCCTTGT
GGACAAAttcgtgttcgagttatggagactccactggaGCTGTATGAATT
CTGGCCCGATccctttttttatgagaatgaTATGAGTTTCATATTTCAGA
AATAATTTTGACTAAATAATCAGTATCttgataaaaaagtaatttgggaa
atttcttttggaatttCAAAGAGGTTCGATTGATAGGAATGATCTTAATT
TCTGGGACTTTCTTGAAGTGAGACTagagaataagttcgaatttTAGAAA
GATTCAATTAATTTAGGCTCGAATTATAGCAAGTCACACTTTCTTTGTTA
TAAAGGGTGGCAGAAAAATAATTCGACTGGTTTAATGTTTTAAATATAAT
TCCTAGACTGGATTCATTACCAGTATCTCAAATCCAAATCTGAGAGTAAT
CGTTTAATATTTACTTATTATAAATATCTTTGTGCCATTTCCTACTTTTA
GCATTCAACGCCGAGCCTTACATCGACCAAATCTCTTCCATTTACTTACA
AGACCACTTATGGAGGGTTCCCATCTCAAACCAGTACCTTCAATTCATCG
GAACTCGACAAGGACaaaaaaaTGAGGCTATAAACTCTGTAACTTTTGAG
AGTTTATCACTTACCGACATCGACAAGCCTCAAAATGAACCCTTATTTTC
ACAAAATGAACCCTTATTTTCATATGAAAAACAGTCTGACCTTACCCTTT
GAAACTATTAATCATAACATTTAATTGATATGCTTACTGTTGGAAGGCTT
TTCTACACACTCGTATATTTTAAGGACCAACTATAACATACATCTCATCA
AAACGCTATATCCTATCCTGGAGGAGGTTGGATCTACCAATGCAACTATC
AACAAAACAGCTTTATAAACTTTAAACAACATTTCAATGTATTGTAACTA
TGATTCGTTATCAGATTTGATCCTATTCAACTCGGATTATCTCATCGATG
CAGTGACCCTCCAGTTCCGTCACATAATGATCGACTCCGCCGCGCCGGGT
GTTTTAGCCGTCATTCTGAGACTCTGTGATAAAGACATTATGCCGATAGT
ATGTGATTCTGCCGCTGATGTATTTCGTCTACTTGATGAATACCAAGAAG
AAATTGATATTCAAATGTTGGAGATTTTAGCTGTCAACAAATGGTTTTGC
TCTAATAAAAATGAAACTGGTTCGACTGTGGACTCTGATATGAAGGTATT
AACCCTTTGTCTGCCGtgcgttttttttaagatttgacCTCTGTGCCACG
GGAAAAATGAAGGTTCTACCTCTGTGCAACGGAAAAATTGAAGTTTCGAC
ATGTTTGCCAGATGTCGGGATATGCCGACTTGAGTGGCTGCAGTGTACAC
CTATCACATTTAGCTTTAAGTGATATGGTGTTTCCTTTGGGAAAAATGTA
TGATCGTGAAatctttcaaatatattttgattattGAACTTTGGCATTCA
ATGATCTTTCAATTAAAAACCGTTGCAAATAGAGTGTCAAGTCGGCTATG
CCGTCATTGGCAAGTAATTGGAAAGTGCTCATGTCAGCAGATGCCGACAA
CCGCAGTTAAAAGGTTAAGGTCCACTCCTTTTGACTTGAACCATCATAAC
ACGAACCTCGAGTCATCCTTTTGCCCTTATCTTATTTTCCCCCATATCTC
AAACTATGTATAAATTCAAACTAGGTGTGTCAACCATAGATAGCCATTAG
CCCCGCCGAGCCGTTTGAAGAGAGCGGGGAGGAGTTCACTTTCTAAACAC
CTTAAAACGCTGTCTAACTGCATaaaaaaaGGATTTCGACttatgagtga
aggtagaggTATCACCATAAATCCCTAACACCTTCCCTGGTAGTGCTTGG
GATTAGAACACAGTCCATActgagtttatcgttctacatctgcaatttga
gctttactaagctcatttggATTTCGACTTCTCAAAAATTTTAGTATGTA
AAAAAGTGAAGGGTCCATCAGAGCTAGTAATTTAAGAttcttcattttaa
ttttcagcTGAAGAACTTAGAACCAACGGACGTACTCAATGACGGC Coding sequence (CDS) from alignment at sc0000156_pilon:172180..175325+ >MSTRG.16478.1.p2 ID=MSTRG.16478.1.p2|Name=MSTRG.16478.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=696bp|location=Sequence derived from alignment at sc0000156_pilon:172180..175325+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATTGTAACTATGATTCGTTATCAGATTTGATCCTATTCAACTCGGA
TTATCTCATCGATGCAGTGACCCTCCAGTTCCGTCACATAATGATCGACT
CCGCCGCGCCGGGTGTTTTAGCCGTCATTCTGAGACTCTGTGATAAAGAC
ATTATGCCGATAGTATGTGATTCTGCCGCTGATGTATTTCGTCTACTTGA
TGAATACCAAGAAGAAATTGATATTCAAATGTTGGAGATTTTAGCTGTCA
ACAAATGGTTTTGCTCTAATAAAAATGAAACTGGTTCGACTGTGGACTCT
GATATGAAGcTGAAGAACTTAGAACCAACGGACGTACTCAATGACGGCAT
GTATTGTAACTATGATTCGTTATCAGATTTGATCCTATTCAACTCGGATT
ATCTCATCGATGCAGTGACCCTCCAGTTCCGTCACATAATGATCGACTCC
GCCGCGCCGGGTGTTTTAGCCGTCATTCTGAGACTCTGTGATAAAGACAT
TATGCCGATAGTATGTGATTCTGCCGCTGATGTATTTCGTCTACTTGATG
AATACCAAGAAGAAATTGATATTCAAATGTTGGAGATTTTAGCTGTCAAC
AAATGGTTTTGCTCTAATAAAAATGAAACTGGTTCGACTGTGGACTCTGA
TATGAAGcTGAAGAACTTAGAACCAACGGACGTACTCAATGACGGC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000156_pilon | genome | sc0000156_pilon:172180..175325 + |
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