XLOC_008733 (gene) - C. hemisphaerica

Overview
NameXLOC_008733
Unique NameXLOC_008733
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000215:128289..138603+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008733 ID=XLOC_008733|Name=XLOC_008733|organism=Clytia hemisphaerica|type=gene|length=10315bp|location=Sequence derived from alignment at sc0000215:128289..138603+ (Clytia hemisphaerica)
TCATCAATAATCATTATTATTTCAGAAAGTTATACCCTCCCCTTATTAAA
GGCAGGTTTTAAGTAAAATCTCTTGGAATTTACTTagaattttaaagata
ttttgcaTCAAAACACTTACATAAAAGGATGGAATTTACAGAGGAGGAAG
TTAGAGAGAAGTTGAAAGAGTTGGGCTATGTCAATGTTCCACGAAGCAAG
TTACAAGAATTCATGCAAGGTATTGTTGTCTTATTTACTAATTTTACTAA
CAAAGTCAGTgacttttaaaaatgttattggTTTGAGGTATTTGTAAATT
TCAACTTTGCTTATCTTTGAGTTTCTAATATGCCTATTTGCTAAGCAAAG
CTGTATATGAATGAAGCTGGGGGTCTGGTTGGTGTTCAGAGGTTAAAGCT
CctgaaaaatcttaaatatgTAGATTATATTAGTTATCTTTGCTTGTAAA
GAACAAACAAGTTTAATTTTGctagaaaatatctttttggacctacctcc
gggtgccccggtggaggtcctataaattaacccatgtccgttcgtccgtc
cgtctgttcgttcgtccgtccgtctgttaccagcttttctcaggattggc
tcattagtttcttctgattttttgcacaatgatgcaaaatggcaatgccc
agaacgtgacggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNactttgtgcaaaatcctgtcattacttttttct
gattttttgtacaaagatggagggcaagattctctaaagaatggctgaag
tggtttttcccggaaaattcttactcgccttaaaaaacggattttcgtat
tttgggggaaattccctttaaccaaataagaaaatatagcttttaacaat
gttgactcattatttttttctgatttNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTtcatatt
ttggggaaattccctttaaccaaataagaaaatatagcttttctcaatgt
tgactcaaaatttttttctgattttttgcacaatgatgcaaaagggcaat
gcccaaaatgtgacgaagccagatttttaaggaaaattattttgggcaag
tTTGGgcaaaaaacagcttaaaaggttttttgggcctgaatggttcaagt
gattttcgtatttggggaaattcctttttaccattttacattattcaaca
cacNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTATTTtagattgagtt
tcaaaaaccAATCTTTTACattgagtattttggccggtattgaacataaa
aaagtgcttagaaaaatctcTGCCTGCAccaatattattttttcagcTTT
AATCTAGGATATGACATTGGTTCTATCTGTTTTTATATCTGCCCAGATCT
GCCCGTCTGTTTGACACaaaactttcgatttcaaaaaatttgctcAAATC
TCGTGTTCAGAAATTTTAGGCTAATATATTAGCgattatttatgattttt
caatgtttCGATTTTTTAGATTTACAAGACCTTGTCGAATATGATCAATC
AATGAGTGGTGATTCTTCTGCACCTTCCAGAGATCAATGTAAGTGATTTT
GGAATCGAATCCTCTACAGCTAAGTGTTTACTGaagtaaaattaattaat
ttcattGTGATGGAAAAATCATTTTCCAGTGGACACCCTGTCCATATCTA
AGAGAAattcttcaaagtttttattGTTTCACAGAGACTAATTTAAAGGA
AGATCTGAATTACCAAATTTTGTTGCTCATTGCTGGCTTTTCATCAAAAG
GTTGAATTGAGATGACGAAAAAACATAAGAGTATTATTTATCTGTAGACT
AGTGTTAAGAATCATTTTGTCTCAGTGAAGTATTATGAAAGAttgctttt
ttttctcaaaattctgcataattcaccaaaatctCAAGAACGTGTTAAAC
ATTTTCTGAATTATAATCCATTTTCCTTTTCCTTGCTTTAACCACTATAA
AAACCCTTTGTAAATATCTTGCAGACGACTCCATCCCAGATGATTATTCA
ACAGATGATCAACTAGATGACTCCTACTTCCAAAGGTCGACAGCCTCTTC
AGTACCAGCTCCACTACACGATGTCACTAATGGTACCAATAGATCAAGAA
GTGCCTTCTCTAAAGAAAAGGTTTGTCTTTGAGTGAGCTTCCTCTTATCA
TTGAACAATTGAGTAAAACAGTCTGGTTAGCTCAGTGCGAAAGATATTTT
CACTTTGAAACTCGTTCTGGTCAAGGGATTCACAAAAGTTTTACTAGCCA
TTTTATGATAAGTATACAATGTAAACATTTCATTTCTGTTGAATCGTAAC
TTCTATTTTAGCTAGCAAATTTCTTCGATACGTATTTTAAATGAACCTTC
AGATGGAAAACAGAAAATTCGTAGTATTATTTCGCCATCTTTTTACTTTA
GATCTTTTGctcttttttctctctttaggcaattacttttttattttctg
gtttacggaatcgccgacgtttttttttgcaaaagtaaaataaaaataaa
attgaaattcatagaaattttatttatttttgcactTCCGATTCtgttta
atctgccatgaaatggatttttttagaaaacttcaTTTNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNATTTTCTGCTGTGTATGTAAGTTTCCTcaaaacacattttatttt
ctccaacattaaagtttgaaaacaacaattttatttttattttttttcca
tccttcgctccaaaagatcatctccaaatgtccgtaaaccagaaaataaa
aaagtacttgCCTTACTCGTTTTTAATCAACCCTTACATAAGTATCCCTT
GACGTTATTAGAAAAAAACGGAATATTGCTTAAACCTTACACATTATTGC
CAACATATTCCTCTCTTTCCCAATCGCAGACAATTTTATTTCCTCTATCA
CTTGAGCTGTCTAGAATGTTGACATCTTGTTTATTTATTCCTTTGTTCCT
TGCTGTGTATCTTCCTGTCAATAAAGTTACTGTGAATATTTGACAGGGTG
ATTTTCATACACGCTACTTTTATACGTTTCCTCATATACTAGTTTCTTTT
CCGTCTGACTGTGAACTTGTACTTTGGAAATAATAATTTGGAAAAACgtg
atttaaagcttttaaggTATTGTTTTTTGTATATGCGATAGCTTTTTTGC
AAGCTATATTTGACATACAATAGTACTTGCGTCTCTCTCTGTAACACGAA
TATCTTCATAAAATACTTGAACAATCCTTTTCCTACTATTTCTTGGAAGA
AGAAAGGTAGAATTTTGGAATTGGAAGTTCATTCTAGCGATTGCTGTTTC
CGCCTTGCCATTGGAGGTATGGACCCTCGTCTTTCTCTATACATTTCATA
ATATTCCATCATTAGATTTCATCACGCAGACAACGTCATCAGGTGGCGGA
AGAGAAAGAAAATCCCACCCATTACGATACGTCATCAATGACCAGCGTTT
CTCCCAATCACGAAGATTCTTCTAAAATTCGTAGGAAGGTGGCCAGGTAA
TTTCAATTCATTACTTGAAGTAGTGATGTCGGATGTCTCACAAACAAGTT
TGGATTTACGAGACCAAAGTTcttttgacattcaaaaaaagtttcttttg
taGTGGACAGTTTTGGGATTTCTTAGTCTAGTGAGTAGTTAAGTTGATAC
TAAAGTAGAATGAAAACGGAAGAATTGAACCAAAGCTACAAAGAATGCAT
TCCTAAATCCTCATAGACTTTTCTTTAGCTTTTTTCTATTGCTCGATTAT
CTTCTTCAAGTTTCAGTTGCCTAGAGTTTTACAATGATGCTAAATTAGTA
CTCTACTTCAATTCTTCGgatgaaaacatcaaaatgttTCATTGATAGTA
TAAAAATACTAATTCTCTCATTTGGACATTTTAAAGTTGAAAGGTATCTC
CTGCTTATTCATGATCATGACATTTCTGTTTCTCTCGGAAAGAGCCATAT
GAATTTCTATGTCTTactaatttttaatattttttgcttttcaACAATAA
ATTAGTCTGGATAAGCCTCCCCAAGTTAGACCAATTTTCTCGTGTTTCTT
TTACAATATTTTACGAAACTCCAGAAGGAACCTATCACTTTCTTTGAAGA
TTAGTGCTGCAGATTATGTATAAGACTATTTCTCGTTCTTATAACTTTTT
TCCAATTTATTTCAATCATAGGAAATGCGAAGGACAGACGCGTGTTTTTG
ACGAAACTTTCACGGATAGTGACGTAACGGATATCACACTTCTTGAAGAC
AGGATCAAGAACCTTCCATACCATCAACAACAACATCAAGACCACCGACA
TCTTCAACGAGCACCTTCAGATACTTCAAATATGTCTACTACTTCAACTC
AAGCATCCTCTTTACCTGCGTTCATACGTACTTCCAAAAGTCACCCGCAT
ACTAAAGGGATCAAGAAAAATGACCCAGTCAACAGGTAAGTTCTTATAAA
GCAGTGGCATTTTCGTCAAtagtcttttttgctaaaatgtTCGACATCtt
attctgttttcttttttaaaatgagCTTCTTTAGTACAGCATTGTTGCAG
TACTTTTAATCATCGTCATTTCATTCATATTCATTTATCATTGTAGATAT
CATCAGTTCAAAACAGGATGGGAGCAAAATAAAATGCCCGGTGAAGCGAA
ACATTCCAAGTTGCGATGGCAAGTTCGAGTAAGTCCTAAATTCCCAAGAT
TATTCTCAATATTAAAGCCTATAGACCAGGAATTTGTTGATGATATTATT
GTCTAATGTATTTGAGTTGGGGAACTAGCATTTTTCTTAACCTGCATGGA
ATAACACTTAACAAATTCAAAGCTTCATTTTTTGTAGTACTTTAAGTTTC
TTGCGTACAATCATCGGCtcagggggggtcaagcagttagtacaagacat
catgcctactaagtgattctttggaggaaagaggccacaccaccaccctt
tgacAGTTAGTATGAAATATACNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNcccccccccccctgatcgGCTCCATACAAAATGATCT
AACttgttgaaaaaaatcaaatttttacaaGGCTCAGGGTTGTAAAATGT
cgtaaaattataataaaaaattgaaaaaaagaaacaagaaaatgCTTTTC
TCTGAAAtaacactttaaaaaaattaatataagAAGTGAAACTAACGATT
TAATTACgacttttttctttgtatttctagGAACAAATGCTGACTTATGA
AGCCTTTGAGGTGagtattttgaccattttattATCATAAACTTGTTATG
ATCTTTCCAACCAAATACCTCTTTACGATCTATCGCTTCAATTACACTTT
TAGAAACCAAGACATAGGCCGATGGTCAATAACTACGTTGTTCCTACCGA
CAAGAAGCGACAATCTTTGAGATGGCAAGTCCGCACTGCTATGGCTAACA
CCTGAGATGTTTGTAGCGTGGTGAGAAGggtctttttaaatttttcaaaa
ctacacAATTATGAGTTTTCAACGCTTCAGGTTTTTGTCTCAACGCTAAT
ACCTAAAACATGTGCTGGGTGTATAGATTCACTTCACTGCCTAGCTGAAC
TGAGCTCTTTGATAATTTCTGATGATTGCGGTGAGTTAATTGAAAACACT
CAACAGTGCCATCCAGTCTGTTAAATAGCCTTAAGTGGCCTCTAGGCTAG
AGTATAGGTTGTGTAAGGCAGAGGACAAGTTGTGCTAACTTTAGGTTGAT
CTTTTATACAAATTTATGACGATTCCTTTCCTTTTCCAGGTTTAGTTTCC
TATGATGTGAAGGGAAAGTTAGAATTACTATACTGATTATCAACATACAC
GCTTGGATGTGGTCTTTAATCAGATTGAATGACTTTTAGACTAGAGTTGG
CGAATGAATGAACATGTACATactgaattttaatttttgaatatATGATA
CAAATGTATTATCGTAATATTTTATTATGAAAGCGTATAatgtaaagaaa
aataattttacaaacTAAACTGCTTCTTAAAAAGTAGTGGCATTTTGCTC
GATTGTCTTTTTGCTGAAATGTTTGATATCTTAATAACTAACTCTGTGTT
GTACAGTTATTTCATATTACTGTTTTTGAAACACTTTTACTTAATAGAAA
GCGAACTTGCGAAGTCGTCTCATTCGATTTTGTTCCTGTTTGAATTTAAT
GCTCACTTTTCTTTATTTAcagagaaaaaaatacaaactcgaaaacaaaa
acagaatGCTACAGAGGATTTTGGTGTTAAATGCTGGCTCATCTTCACTG
AAGTATGCGTTATACACAGCTCTTGATAAACAAATACAAgctgtttcggc
ttccggtataATCGAACAGATCGGACAACCTAACCAGAAGATAAAACACA
AATTCCAAGTAGGTGATACAAAAGAGAAAATCAATCTCCCTTTCTcagag
aaagatttgaattataaCGGTGCTTTAAAATCGTGTTTGAATTTGCTTCG
TGAGACGGTTCCCCATGATGACGGTGGTCATTTTATTCATGGTGTTGGCC
ATCGAGTCGTTCACGGTGGTGAAACACTGTCCCAACCTGAAATTGTAAAC
ACTAGTGTTATTGAGGCTATTAAAAAGGCTTCATCACTAGCCCCACTTCA
CAATCCAGCGAATTTACTAGGTATTGAAACAGCAATGGAAAGTCTCCCAA
CTGATTGCAAACATGTGGCGGTCTTCGATACCGCCTTTCATTCCACCCTA
GCACCTCATGTCTACCATTATGCAATACCTATGGAATATTACCATAATCA
CGGCATCCGAAAATATGGTTTCCATGGCACCAGTCATGAGTACATACTTG
AAGAATCTGCGAAATTCTTGAATAAAAGAGTTGATACAATGAATATGATT
TCGTGTCATTTGGGAGCTGGGGCGAGTGTCTGTTGTATTAAAAATGGTGA
GTCAATTGATGTTTCTATGGGTTTGACTCCAATGGAGGGATTAGTTATGG
CCACAAGATCTGGTGATATTGATCCTAGTGCTCTCTTCCACATGATGAGA
GAACTGGGTATGAGCAAAGATGAAGTTGAAGAATTAATCATCAAGAAAAG
TGGATGGTATGGGTTGAGCGGAGAAATAGACGCCCGCGAGATCGAGCGAC
GTGCTGATAACGGAGAAGATCAGTTCGAGCTGACGCAGAAAATTATGGTG
CACCGTATCCGTAAATACATTGGTGCATACATGATCAATTTATGTGGCAA
GATGGATGCGCTGGTTTTTACGGCGGGTTTAGGTGAGAATTGGCCGTCCC
TTCGTGAATTATGTTTGCATAATATGGAGAGGTTTGGTATGGAGTTggat
aaggagaaaaacaaaaacatgattCTACCCGACCGTTGTAATGATGTTTC
CACCTTTTTCTCACAAATTCGTATTTTTGTCATTCCGACTGATGAGGAAA
AGCAGATCGCTCGGCAAACGGTGCAATTGATCAATCAAGATTGATAGGAG
TTAGCTGTAGGTAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00015654TCONS_00015654Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00015654-proteinTCONS_00015654-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000215supercontigsc0000215:128289..138603 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
16.41	14.69	10.64	11.71	43.92	32.39	20.84	22.46	20.1	19.69	19.21	16.77	13.77	14.27	18.74	23.05	23.51	20.93	11.32	10.93	14.16	14.41	32.41	28.85	33.67	28.12	12.03	10.78	32.07	29.68