XLOC_008423 (gene) - C. hemisphaerica

Overview
NameXLOC_008423
Unique NameXLOC_008423
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000203:233578..240040-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008423 ID=XLOC_008423|Name=XLOC_008423|organism=Clytia hemisphaerica|type=gene|length=6463bp|location=Sequence derived from alignment at sc0000203:233578..240040- (Clytia hemisphaerica)
TAGATTATGCAGAAATGACATTGTCAGTTATGATTGAAAAAAAAGATTTG AGACATGAGTTGAACCCCATCAACAGACAGCCATTAGTAGGCCTGATACT CCCTGGAAGATGGTCAAATTTGAAAATCAAATTTAATTAATTCTGGAAGT ACAAAGAGAGCAAGGCAGAAAGAACAACTTCAACAGAGGCAAGGAAGGCA ATATTGACTTTACCAAAATTACAAGAAAAAGTAGTCAAAAAAAATCCTAT ATATAACATCTCACTAAATGATGAATCCATGAAAGTTTTTTGGGCTGGCA AAAATAAAATGCGAAGAAGAAAGACTGACAAAGGCTTTGGCTTGTTAGAT GAAGGCAAATTAAAGGAAAAATCGGTAGGAAAGAAAAAAAGACAAAAACA TTGTATTATATGGATATAAAATGGAATGGCCCAATCATCAGGCCAAAAGT ATCAGAAGGTTTTCTCAAAATATTTTCAGAACCTTTCAAAACCATCATCT TCAGCAAGGACTCAAGAATTTACAAAAAAAAACAAAAAACTTATAATATA CTTTTGGGATGGAATTTATCAAAAATCTTCTTTTTGAATTTTTTTTTTGT AAATTATATTTGGTACCAAAAAATTGATAACAGGAAAGAAAAATTAAGAG GAATTAAAAAGTTATTGGCAATTACCTGTTACATGCACTGCCCGTTTTAA TCCCCCTCCTCATACTGCTGTTTCTAGAAAGATAATAGAAAATATAAAAA ATAAAAATGGCATCAAACTATCATCAAATTGCTATCCCAAAGAATATATC TGACGATACTATTTTGTATTGTATTGAAACTGTGGCCAATATGAAATTGA GTCCAAATGATCTGAAGAATCCTACTGTGAGTATGTTTTTATGGCAAGAC AAATAATCAGAAAATTTTAGATAAAAAAAAAAATTGACATTTTTTCTTGA GATTTTTATTTTCATCAACTCATGCATCGAAATAAGGGTTGGAAAGTGCA TAACACTTTTTTTGGCAAGCATGGTTTTTGCATCCTGAAATGGATAAAAA AAATGGATTTTAAATTTTTAGCTTGTATAAAGTAATCCAAAAACGCATCG CAAATTGCAAAATGCGATACGCTAATTTGATTCCTGCAACTCTTGATAAA CTTTAGACCAAATTTGTTTAGCTTAAATAACCTTTTGTTGTTTTGATAGT CTGAAATGGTGACAACAATATACAATAGTTTTGCGTGCAATATCCTCAAT GTTTCAGTGGAACAAATCACACAGGTAATCCATATTTTGTTATTCAGAAA ACTGAAAACATTCTTTATTAGAGCTTGGTAAAACTTCTGATAGAAAATTG AAAAAAACTTTTTATTAGGGCTTGGCAAAACTTCTGATAGAGGAATAGCA ATTAAATATATGTTTGTACATCTATCTGTTCATATTTTGTCACTTATTAA GTTTTATTACACAGATTGGATAGCTTGTTCAAATTTATTTATAGGTTCCA CTCCACATTTTGGAGACCATTTCCAATCCAGATCTTATCACTGAAGAAGC CATTGGTCCATTGATGTGCATGAAAGCACTGTAAGCTAATTCATGTGTTT TGTTCATCTTAAAAGTATTTTGTATTTTGCTTCTACAGTTTTAATAACAC AATAGGTTTAGTTCAACATCTTTCTAGCCACAGAACATCAACGAAATTAC CTGCAATGCAAATGTTCTTTTTTTATCACCTATTCCTTTTTGCCTACCAG GGACATTTAGAATTGATCAAAATTTTTCTTATTTTAAAATTAAAGGCCAG AAACTTTTCAATGATTTGCGATCATCTTTTACTGACCCTGGTTGAAGGGT GGGTTGACCCCACTACGTCACTAGTCTTATATATCATGTTTTAATTTATG GTTATATTTTATTTGGAAAGCTAAATTTCAATGCTATTTTGATTATACTG ATTTTTATTATTTTAGGGAATTGTTATTCAGACTTTGTGGAGTAGGTGAC TTTTGTATGGCAGATCTACGAGAGCCATGTTAGTATAGCTTTTCTTATTT GGAAGATACTGTTTTGTTGTTTTAATGCTTAGGTTGTATGGACAAGCTTC ATAATTCAGTTTTTTTTTAATCTAAATATTTTGACTTTTTTACTTTCAAG CTAAGAAGAGAACAAGGAAATTACTCAGGTATGAGATGATTTAAAAGGAA AAATTTATCAAAATAATCTTTTCCATTCTTTTTCATGCAATACAATTTTT CTCAATTATGATATTTAGAAATAGCTAAATATGTATTTTCCAAAAATCAA AATGTTAAAAACATAACTAAAAGTTTCATGCACTTACGTACAATCATCAG ATGTGACTAAAAACAGTGTTGAAAAGAAANTGAGAGCTCCGTGGAATTTG ACTTGTCTTCGTGACGAAAAGTGTGTTTGTGTTGGTACCATCTTGTTTTG AACGTGTTTTCCGTCAAACCGATATACTGAGGTGTAAACACTTTTTAGAA ATTTAGAAATAGCATAAAAACTGTTTCAAAATTTTGATGAAAGAAACCAC CTCATTCTAGCTAAGCAAGGTGGATGCTTGGAAATACTTTTTACTTCATT TCTTTATAGCCTTCAAGCCTAAAACACAGTGTTGAGGGAAGCAATGTCAA GCTTGTTTCCTATTATTATTGGTTTGTTTGAAATCTAAATTATCATTTTT ATCCTTTTTTAGTGCACTTATAAATTTCTACCAATTTTGCGTTCAAAATG AAAAAGATAAAAATGATGTCCTTAGCAAACTGGTAAGTGTTTTGTTATAT ATCAAGGACAATCCATACCTATAATTGTTTTCATAAAGAATCCTCTATAT TGTTGGGCCTATAGTGAGCTCAACCTGGCCCAAATTTTGTCTTCAATACT TTCCACCAATGGCATTCTTATTACTTCTCCTTTTCAGTTCTGGCCCTTTT TCACCTTTTTCTACATAGGAAACTCTACTACTCTCAACCATGTATGTAAA TGTGAAAGATTGTCATTGTTTACACCTATCATACATACTATCTCACACTT TGATGCTGCAAAGTTTGTCTTGAGATTTTGTCAAATATTGATTTTTTCAT TGTTTTAAAAAATTTCTTGTGTCCAGGAACACCTATCAAAAGGAATTGAA GTATACACTGATAAAAGAAGAATGCTAAAAGAAAGAATTACACTATTAAA GTAAATATTTTTCTTCCTTTTACATCAAACTGCCTCTTTAAGATAGGTTT TTCAATAATAATGGTTCAATCATTAATGTTATAATATTAAGAAATGTTCA ACAAAAATTTCTGTTGTATTTGAAATGCTACTAATAGTAAAATATTCTTA CCTTTTTTATTTTGAAATATTTTAGGGCTGAACGAATGGAAAAACAAAAG GCAGTACAAGAGGTGATTTATTTATTAATTCAAGTATTCTTTTTGTTATT TTTGTCTCTGAAGGATACTAATCAAGGTTTCTTTTCTGTCTAGTTATTGA ACCGCTTTTTCAATAAATGAGATCACCTGCGTGATGGCATAATTGACCCC TTCTTTTCGTGTGCCACAATGATCTTTGATTTCTAAAAGCGTGATGTGTG ATTGATAGGATGATTATAAAATGTCGAGAGAATATTTTCGGCTTGTTTTT GGCATGTTTACAATTACTATTTTTGGTCTGATGTTGTCATTAAAATTTTC CACTAGGGGCCTTATAAAATTTCACAACCATTGTTTGATTTTAGATGAAT CTTAGTGCTTTGAGAGGAAGACAAGAAGAAGTAGCAGCGTACAAGGTTTC CTTCTATCTACTTTTATTGGAATTTACAATTAGGTCTAACTAAACTTCTT TTCTACTATCATTTCTAATATTATCCATAAGACAAGTTCCAGGTACTATG TTGATGTTATTGTAATTAATCGCACGATGGGTTATTTTTTCTTATTTGGC ACGCCCTCAAAGAGAACAATTAATCGTTAATTGCATCCTGTAGAGAGCAA TTAATCGTTAATCACATTCTCCAATGCGGTGCCAATGTTTACAAAATTGA TTTTAATGTTTTTTCTTACATTTTTTTTGCATCGAACGCTTTAATTGCAT TCGAATTTTATTTTGTGAGAAAAAAAATCAATAAACAACAATAAAAGAAA GACATAAAGACAAGAGAAAAATATAAAACTGTCAGTGTAATTTCTGTAAT TTACTTTCCTAACTGGGAAAAAGTAGTGAAAGCCATTGTGCGATTAGCTC GTAATCACATAATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTCCTCGTCCTTTCGG ACTCGGAAAATTAATAACAAAAAAACCACTCGTGCAATTATATTCGAATT GCACTCGTTATCATGTGATTACATATACTTATCATATTACTCTAAGCCAT GAAATATTTGTGCTGTGTTTAATCCTCATCTTGGGTTAGGACCAATTATG AAGGTTATCAGGGACTGCTGATCAACAAGGTATTCCAACCTAAATATTTA TCAGGCTTGGCTTGGCACTTGGCACGTATTACAGGATACTGTAATNCCTA AATATTTATTAGGCTTGGCACTTGACACGTATTACAGGATACTGTAATTT GGATTTATTTATAGGAACAAAATATACAAAAAAACAAGAAAATTATGCAA GAAACAGATGAACTTCAATGCCTTGTGGTAAGTGAGAAAAAATTTGAATA AATTCTATTATTCTATTTTTGTTGCATGGTAAGTGAACTGTTCACTCTAT CCCATTTTCATTTTTCAAGTTTTTATTCATTTCAATTAAAAGTTTGTATA GAAATTGTAGAAATTTAACTGAATCAGCTAGCTACTATTTGTTTCATTTT ACCGATTTACCTTGATTTACCAATACTTTTATTTCAAATTATAGACCGTC ACCAAATCATCACGTCTCATCAAACAAGCTCAAGAGATTTTAGAAGAACG TATCAGTCGTGAAAATGCACTTAGAATAAAAGAGAACACTTTTACCAAAT TTGGTGATGTATGTATCATTTGAAACGGTCAAGGAAACACTTACTTTTAT TTTCTTATTCTTATTATTTCCAAATCCTTCGGAATTGGCTAACTAATTGT GTAACTAACAAGTGTGTTTGATTTTCCTTAGATTGCCCCATCAGCACTAA AAACAGTCCAAAATATCAAAGAAGATTTGAACAGATTGTCGTAAGAATCA AACTATCTTCACTTTCTTTCTATTCTAAATCTATCAAATAAGTTTAAAAT GATTGTCAACAAAAACTATTCTAAATCTATTCAAGTAATTTACTTTTACT TTTTGTTACATAACAGACAACTTTCTTCTCTATCTATTCCTTGAAGGGAT TTATTCTAATGGACAAAATAAAACACTCAATATCGCTGTGATTGGATAGC AAAATATTGGTGCTTTCACCAGTGCTTGCGAATGAACAAAATAAAGCCAT TCACATATTTTCCCAGATGTAAATTTCAATTAATAAATCTAGTTTGAATC AATTCCAAGAGGTCTTCATTCATTCTCAGATAGTTAGCAGTGGCGTTGTG GCACTCCCCCAGTGGAGCTTTTTTGAACGCCCCAATCTTAAAAATCATAC TTTATGCGCCTTAAATGGTGCCCCAAGATCAATTTTACTGAGATAATTTT GAATTACTTGAATTTTTTCGCTCCCAATAAAGTTAATTGGTAATTTCTTC GCAATCTAGCTAATTTACAAGTTTTTTGTGTACAATATAGCATTATTAAA TGAAAATCTAACTGCGCCCCAAGACCAATTTGCTGACACTTATCCACTAA ATTTTTCCTTCCTCATTATGCCTAGGCAAATGAATTAGTAAAAGTTTAGA AACTGGTGGGTGGGGGCGCCACTTTGGAAAATTGGGGGCAACATTAAAAA AAATTTACATTGGCCCCTCCTCCTTCCACAGCGCCACTGACAGTTAGGCT GCAGTTTTAAGGCTTTTTTATCGCTCTGGAAATTTCAAACACAACTTTGA GTACTTAGCAGCTGCCCTTATCTTTTTACCTTCAGACTGGAATGGTTAGT TTGTTGAAATTTTGCTTTTCTTTTGAAATTTTCAGGATCAATCACAAAAG AAAAGAAGAAATAACAGATTTGTCCATGGATCTGAAAAGAGAAGCTAAAG ATGTTGCGGCTCAAATCGAGGTGAAGGCCTATTTTTCTATTAATAACTGT ATGTGTGTGTCATCAATCATTTTCATTTTCAGAATGTATTCGATTTGTCT GCTTTGGCTGTTAAAATCTGGTTTATACTTTATTCACATTAGCCTTTCTT TTTTAAATTGAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00015053TCONS_00015053Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00015053-proteinTCONS_00015053-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000203supercontigsc0000203:233578..240040 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
22.51 22.44 12.29 11.79 13.28 12.23 8.76 8.89 8.3 8.17 5.99 5.67 3.79 3.49 5.63 5.36 10.82 9.22 1.96 2.52 6.14 5.6 16.61 16.96 11.82 13.33 2.77 2.09 8.03 9.45