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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000210_pilon:333478..340599- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.18944.1.p1 ID=MSTRG.18944.1.p1|Name=MSTRG.18944.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7122bp|location=Sequence derived from alignment at sc0000210_pilon:333478..340599- (Clytia hemisphaerica_ch_hm2_pilon)
CAAATGGGCGCTCAATTTTAGTATGAAAGCCAAGTCGGGGTAATAATAAT
AACAAACTATATTTCTGCTTAAAAGCCGATTCGGAAGATAACTTCTCGTG
CACAGAAATACAACAAGATGGCGGCCAGATCTGGACAAATTTTACGAAAC
TTAATTCGCCTTGCTCCTAAAAACACAGTGACTAAATTATCTTGTCGTGC
TATAAACACTCAACTTCAATGTACCAATAAACATCAGATATTAAAAACGC
TTCCAACTATAGCAAGAGTGAGCCAGAGGTTTTATGGTGATACGGCTGAT
GATGAAAGCCTTGAAGACAAAACCATGAACGTTTTAAAGTTATTTGACAA
GGTTGACCCTTCTAAAGTAAGTTTCTTATTTTCATTCTATTTGACTTAAG
TTTTTGAAAGACTTTGGACCTAAGGACGCATTATTGTGATAAACAAACAT
TCCAATTTGAGGATATATATTAGGGTGCGCACTCGTCGGGATTTTTTGCG
TGGAAAAAGTCGAAAATCAAAATTAGAACATTCCATCCATCATAACTAAT
CCTTAACAACTCCAAACTTGTTCATTCTTTTTTTTTAAATACTCAGAATT
TATCAGAGAAAACAAAGAAAAAAACTCCATCCCATTACCTACCTTCAATA
AAAAGATATACCATTTATTAGACATCAAGGTGAATAAATGGCGACTCGGA
ATTCGTGGCACCACCGTCTACCTTGACCACCATTTTTCAAATGCCTATCG
CTAATGAGCTGGATTAGTTATAGACTCGCGGTTTTTTTTATAAAACGCGG
GGAAGATAGTACTTTAGTTTGTCACGTGGTAGCCTTTTCGATAATCTACG
GGCCGTTTTTAAATCGAGAAAGAAGAAGAAATTTCGATTTTTCGGCACTT
TCCTGAAATTTTTATCAGGGCTACCACATATGGTTGGAAAGCTAAGGGTT
TCAGCTTTTCATTGGTAAAATTTGTTTTTAGCTATCATTTCCAGCTCATT
AGCGATAGGCTAAAGTTTAACAGTCATCGGGCCGATTTTCAGACCGCGCC
AGCAAAACTCCTCACGCCCCGCCACACGGAAGGCTAGATTTCATCCGCCA
TTTTTGGCGCGATTTTGGTGCTTCCGAAAATTATTTCTTGCTGGCGTGGT
GTAAGGAGGCGATTCTTTGAAAAGGTGGTTTTTTTGTGGTTTGAAAATGG
AATAACTTTGGAACTACTTAACCAATTTTAACAAATGACCCCTCATTTTT
CTCACAAAGGTAAGGACTTTCAAATAAAATTAGTTTGGTTTTCAAAATTT
GAGGGGAAAATTTTGGCCTGACCACCCTATATATATAATGTTTCTATTCT
ATTCTATCCGGGAGGGAGGGGGGGGGGTAGGCTTGGCTTTATTCATTTCG
TCTGCTCTTCTTTTCCATTCTTTGATTTGCTCTCTCTCCATTTTCGTTAA
ATTGTTGGTGATGCTCAATTTTACGTACTTCTCGCGCTGTCTCAATTTAT
TTAAGGGGTCGTCGACATTCGACTTTCGAATTTTTTAACGGCATTTGGCC
GTTAAGGGGGGGGAGGGGGTCGACCATGTGCCGTTAAGGGAAGGTCGAAA
ATCTCTTTAGTGGTCAACTCACCACATATCAATTCTTTTCACCAGAAAAT
ATCAATTTTTGAGACGTTTATTCCATACAAGTTACTTTCCATATTTCTTT
TCCTCCTTTTTTTTATCAACTAGATCTGCTAAAGTCGCATACCTAAAGTA
TTCACTTCGCTCTTTTTTAGAATAATTTTAACCAAAACAAACGACCCGAT
GTTTATGTCTCGTGTTCCTTTTGTTTAGACGGTCAGCGCGGCCCTTGAAT
TTCGCAGACGGTCGATCTTTTTTCTTTGAAATGCCGCTATTCTTTTGGGT
AAGATTACGGAGATAATTAATTCGCCCAACTTTCGGAAAAAAGTTTAGAA
ATTATCTCCGTTATTTTTAAAATGTAAACTGAGTGAAGCCGTAGCGATAT
TAAAGATGGCTGACGAAACAACGATGAAAGTGAAGGAGAAAATTTAGAGT
TTCATCGATTTTTGACAATTTTTTAACTTTAGAGAATTTGATGGCCGTTA
ACGTAGAGGGGGGGAGGGGGTCAGAACCATAACGGCCAAATGCCGTTAAA
AATTCGAAAGTCGACGGCCCCTAACTTATCACGTGCGTTTGGTTTGGGAA
CGCGAAACACGAATGCGAACTATATGTCTAAACTTTTCAATATATCTCCA
GAACTAACAGATTTTTTGAAATTCTGTAAAAACAGTGTAGACCTAAAGCT
CTAAAACAGCATCTAATAACATGAAAACCAGAATATGATTCTTCAATGGG
AATCAAAACTATAAAGTGCACTTACAAACATCAATTTGTCAGATCTAACA
AAATTAGTAACCGCACTGTCATCATTGACAATAAAACAAACGATTTTCTG
TCAAGAGCCTTGTAAACATTCCAACAACTTCCATCGAAATGATCTATATA
TTACAGCTCAGTCTACCATTTTTAGCGCGGTCCAAGGATTGAGCAGAGCG
CCCAAGCTCCCGCGCAGCGCGCACCGCAGGGATGAAAAACTTCAATCTGT
CAATCTTTTTCTCAAGCAAAGAGTACGCGAAGCGATTCTAGCTTTACGAT
AGTGCAATGATAGTATCAATGGATAGTATTCAACTATCATTATCCCTTTA
ATTTCATTCCTAGAACTTTTGCAAAAAAAAGGAAAAATAGAAAAGTTGTA
TTTTTTACTGCTCTATTCACATACTGAATTTGAAAGATCTTCTATGTGGC
GTTTTTTTGCAAACTTAAAAAAACTGATTTTTGTCCCGCCTTTGCGGGAC
TTTGGCTTATGGGCTTGAGTGCTGCATAGGGTGCAAAGTCCAAACATGCG
TTTCCCGTAATTTTTGTGTGAAGAGTTAGGTCTACACTGAAAAAGGTCTA
AGTTCTTGAATAGTTTTACTATGTTCTGTGAAAAAATCATAACCATCAGT
CAAATACTCGTTCATCTATTCAAGCAGTTACATCAAAATGCCTCGAAAAT
GTCAATATGAAAATTGCGTAATCAGAGAACGTATGTCTCGCTCATTATAA
AAAGGCCGAGACAAACTTTCAATAATTGGATTGTAACATCGAGTTAAGTC
TCTTTTGTTAAGTCACCAGGGGGTAAATAAAACAGACCTTGATACATTTA
GCGTTTGTTTCAACTTGACGATTCGTTTAAAACTCAGCCTCCTAAATATT
TGGGGTAGGTCAAATATGTACAAAGAAATTCATACTTTTCCAACCCGGCG
AATCTTTAAAAAAGAAGTGAACAATAAAATATAATTACCCTTTCCAAATA
AACCTCTTCGGTGGCGAGCGTAGTCTACTCTGACGTAATTGTAAAATTTA
TGTGATGGGAGTTTGACCTAGTAATGTAATGTTGTTTGGGGAATTATGAA
GTTCTCTGGAATTTCGATTGCATTTATTCAGGTTGATTTTTTATGACTTC
AAATGGTACTTTTTCTAACGAGTTTGATTACTCTGTTCTCACACTTATGT
CTTTTTTTTTCGCGTCCTTTTCCGTGATTACTTTTATTTATATTTTTAAA
GACAGGTAAGAAGGCATATTGATGTAACTGTTAAGATTGAAGACAAAGAT
TTGCGAAGAAAAATAAACCTTGAGCACAAAAAATGCTTTTTTAAACACTT
TTTTCCACCGAAAAACAAATAACTTTTACAGACTTACCTTCCCAGACCTT
CCCCAAATATTGAAGAAGCCTCTACTAATTAAAGTAAATGAGATAAGATA
AGATAAAACCTTAAAATCAACCAGACACAAGTGTTTCAACCTGTATTCCA
ACGAAGCCATATTTTGGTTTGTACAGAAATTTCACCCGCTCAAATCAAAA
CAACAAAATGGTCAATCTCACTATAAAAGCAAAACATTGCCGCCACAGCA
TTTCCCTGGATAAAAATTCTGGTCACGTGACCATCCGTGATTTTAGACCA
ATGAAAACGCTTCATTTCCCCGGATTAAAGTTGTTTCTACACTAACACGC
AGGAAATAGTTAGAAAAAGAGAGAAAAAACAGGGGGTCAAATTAAATTTT
TCTCCCTTCTTGCAGCAAACATAAAAGACTATAAGAGGCCATTTATTTAA
GAAAGGGGTGTTATATCATAAATAATGTAAGTAAGTGATATTCTAAGTAA
CAAAGTTCATTAACAATTTTATTTTGAAGTTTGTTTTTAAAAACAAAACC
CCCGTGCTAGATGATATTTCATTTTCTTAACTTATGGACCCATTTGGAAG
TATTTGTAATACAGATCATTTGGCAGTGTAGTTGCAGTCTATTATACAAG
AATGGGAATCTGAAGTCGTAACTCCTTGCCTGTGACCCTGCAGAGAAATT
TTTAGTTGGCAGACAAAAAAACAAAAGAAATGCTGTAACTCGATAAAAAT
TAGAAAAAGCTGGTTTTCGACTGTTTCTGATCCTAAAGTGCTATTTTTTG
GTAAAATGCTATTCATATTTGGATTTCTAGAAAACTTATCCATTCACTGT
CAATAAATTTTTTACGTGAAAGTACTTGCTTCATGGAATAAAAAGACACA
ATAAAAAATCTTTTAGGGTCATTTTTTTTAATTTGCCAAAATTTTGCGAA
TTTTGCATTTCCCATTTTTACCCTACATAAACGAGCATAAAATTACCACA
GTAGATTCCATCCTACGCTTCAGGTGCTATTTTTACTTCCACTATTGGTC
ACCCGAAGGGTGCGATGGCTTAAAGCACTACTTTTAGTCCGTTATCTAGG
GCTTTATAAATCTATGGTCTCACCAGGGGGGGGGGTCATGCAGTTGGTAC
CAGACATCATGATGACTAACTGCAAAATTGAAAATTTGAGAGTACACTCA
CCACCATTTAGCAGTTAGTACCCCAAAGTACAAAGTGCATTTGACTACTG
GTAGGTTGAGACCACCCCTATTTGCACCTAGTGCCCCCGAGTACTAAGTG
CATTTGACTATTGACACCCCTCTAGGTAGCCCTGGGGTTGACATTATACT
AACGTTGGTAATTTTTCTCTATTTGATTTATGATAAATGCAAAGCCAAGC
ATATACGGTACAAAGCTATTATGCCTAACATATAAAGTCTTTCCAACATA
TTATTAGATCGAAAGCCCCAGCAATGAAAAACGTCTTTTGCATTGTATGA
CAAACGACTGGGTGCAAGAGGGTTAAGAAGACATTGCAATGCTACTTAAC
TTAATAAAAACAAAAAGCTAGCTGAGTCTGAGCATAACACATTTCGCTAA
ATGCTCAGAGCGCGACAGCCCATTCTCCCTTTCCTATCTTCACTTTACCT
GTTTTTTTTTTACTTACTGAGACTTACTTTCTCATTCTGACTGAGTTTTC
ATACCTGTCAATCATTTTTCCATCAATTTCGACCCACCACGGTACTAACC
GTCATGATGTTTTGTACTAACTGCATGACCCCCCCCCCATTGCGACCATT
GTTTTAAAGAATTCAATTTCAAAATAAATATAATGTCATAATCTTCACGC
TTTCTATTTTCAGTTTGTAGAAATATGTTTACATCTTTCCTTAACCATAA
AAACAGAGATGATGCATTTGTAAAGACCTTTTTGCCTTTCCATCCTCATC
CTGTATTGTATGCTAAAAATGATGGCGAATTTACCATGGTCAGATTTCGT
AGGAAAATATGCATAACCTAATACAAATAGATGTCATATATAAAACTTAC
ATGAATAATGAAGAAAAAATTTGCTTCTCTTGAAAACTAGAAATAATGAT
ATCCTCTCATCTCTTAGAACAAGCACATCAGAAAACCATAACAGTACCAG
TATAGACTCGAGCTGAAAATACAACAGTGAAGGTGCAAGAATGATCTTTA
TACTATGAGGCCCCTAGAATAAACATACTCAGAAGTACATTGTATCTTTT
GTCCCTCCCTTCCCCTTTTTCCAAGGTTCTTTGCACATCGTTTAGCCTCT
ACCAGCTACAAAGCAAAATGATGCCTGCAGAATCCTAATCTTTTTTCTAC
CAACATTTTTATTTGTAGGTAAACGTAGAAGCACATTTGATCAACGATCT
TGGTTTGGACAGTTTAGACGTTGTTGAAGTTGTCATGGCTTTCGAAGACG
AATTTGGTAAGTTGTCATTGCCTTGGCCCAAATACGAAAGACAGATTGAT
ACACATTCATTTCTAATGACTATTAGGATCGTCGGAAAGAATTTATCGGC
ATTTTGGGGTACGGATATTGTAACAGCCTTGGTCAGTCTTGGATTTCATG
ATTCTTAAAGCAATTAAAATTACCATGTCTTATTGACATCCACTTTCCAA
AGATTTAGCTGGTTTATCTGATTAAATTTTACTGTCTTTTTATTTATATT
CAGGAATCGAAATTTCTGACGAAGAAGCTGAAAAGATTTTCACCATTCGA
CAGGCTGTTGAACTGATTGGAGCGAAAATGTGAAGATTCAAATCTTGGTC
GAGGTACTATTGGATTTTTTTTTACTTTTATGTTTTTACAAAACAGTTTT
CTGTCTGTATGATCTGTCTCTGGCCTTCGGATTTACCTTATTGGCCATGT
CGTTACTTGTTTTTTCAAAAGTCAATTTATGATTCTATCAGGAAAATCAA
AAATCTTACACTCTCCCTTATTACGCAATATCCTGATAGATTCTTAGGAA
TTAAAAGACCTTTTCATAAATGACGTTACGAACATCTAAATGACGTTACG
AACATCATTTGCTTTTGAAAATATTGCCATGGTGATTAACTCCCAGTGGA
TTTTATTAAAACTACTTTCTATTCATATAAAAATTTTAATGTCTCAATCA
CCATTGAATAATTGTTTGAATACGAGGCAAGTGATGTTCGTGACGTTATT
TATGAAAAGGTCTATTGTGCACCCATAAGTTTCTTTACATGACTGAATAC
TTCGTCTTTCAGGTTTAGAGAGGACGCAGGCGTGGCATGAAACGTCAAAC
CATTCGAACTGCCGAGACAAGCGATTCTCAAGCCGTCCATTTTATAGAAT
GTACTGTTTTATTTTTGAAGGAAATAGAAATTATGTAAATATTACTAAAT
TCCTTAAACTTTTGTTTTCCCG Coding sequence (CDS) from alignment at sc0000210_pilon:333478..340599- >MSTRG.18944.1.p1 ID=MSTRG.18944.1.p1|Name=MSTRG.18944.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1251bp|location=Sequence derived from alignment at sc0000210_pilon:333478..340599- (Clytia hemisphaerica_ch_hm2_pilon)
GAATCGAAATTTCTGACGAAGAAGCTGAAAAGATTTTCACCATTCGACAG
GCTGTTGAACTGATTGGAGCGAAAATGTGAGTAAACGTAGAAGCACATTT
GATCAACGATCTTGGTTTGGACAGTTTAGACGTTGTTGAAGTTGTCATGG
CTTTCGAAGACGAATTTGATGGCGGCCAGATCTGGACAAATTTTACGAAA
CTTAATTCGCCTTGCTCCTAAAAACACAGTGACTAAATTATCTTGTCGTG
CTATAAACACTCAACTTCAATGTACCAATAAACATCAGATATTAAAAACG
CTTCCAACTATAGCAAGAGTGAGCCAGAGGTTTTATGGTGATACGGCTGA
TGATGAAAGCCTTGAAGACAAAACCATGAACGTTTTAAAGTTATTTGACA
AGGTTGACCCTTCTAAAGAATCGAAATTTCTGACGAAGAAGCTGAAAAGA
TTTTCACCATTCGACAGGCTGTTGAACTGATTGGAGCGAAAATGTGAGTA
AACGTAGAAGCACATTTGATCAACGATCTTGGTTTGGACAGTTTAGACGT
TGTTGAAGTTGTCATGGCTTTCGAAGACGAATTTGATGGCGGCCAGATCT
GGACAAATTTTACGAAACTTAATTCGCCTTGCTCCTAAAAACACAGTGAC
TAAATTATCTTGTCGTGCTATAAACACTCAACTTCAATGTACCAATAAAC
ATCAGATATTAAAAACGCTTCCAACTATAGCAAGAGTGAGCCAGAGGTTT
TATGGTGATACGGCTGATGATGAAAGCCTTGAAGACAAAACCATGAACGT
TTTAAAGTTATTTGACAAGGTTGACCCTTCTAAAGAATCGAAATTTCTGA
CGAAGAAGCTGAAAAGATTTTCACCATTCGACAGGCTGTTGAACTGATTG
GAGCGAAAATGTGAGTAAACGTAGAAGCACATTTGATCAACGATCTTGGT
TTGGACAGTTTAGACGTTGTTGAAGTTGTCATGGCTTTCGAAGACGAATT
TGATGGCGGCCAGATCTGGACAAATTTTACGAAACTTAATTCGCCTTGCT
CCTAAAAACACAGTGACTAAATTATCTTGTCGTGCTATAAACACTCAACT
TCAATGTACCAATAAACATCAGATATTAAAAACGCTTCCAACTATAGCAA
GAGTGAGCCAGAGGTTTTATGGTGATACGGCTGATGATGAAAGCCTTGAA
GACAAAACCATGAACGTTTTAAAGTTATTTGACAAGGTTGACCCTTCTAA
A
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000210_pilon | genome | sc0000210_pilon:333478..340599 - |
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