XLOC_008214 (gene) - C. hemisphaerica

Overview
NameXLOC_008214
Unique NameXLOC_008214
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000197:52745..63000+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008214 ID=XLOC_008214|Name=XLOC_008214|organism=Clytia hemisphaerica|type=gene|length=10256bp|location=Sequence derived from alignment at sc0000197:52745..63000+ (Clytia hemisphaerica)
ACCTGTTACTCAAGTTGTTATATTGTTATATTGTTTATATAGGGGTAAAA TATAGTAAGGTTATTTCAAAGATTCTGACTAAATCTATTGActgattttg tttttagataataagttaagaacaagaAAAGATAAAACACTTGGATAGAA GAATACTCAGTGACAAAGAATGGATAATGAGGATATCAATCTAGTAGACT CAGATACAGGTAATATCCTTTCAGCTTTATATCGGTTTCCATAGCTACTT GAACAAAGAAActtgtcattttattgatgtAAATTAACCCAAGTTGCATT AATTATaacaattaaagaaaaaaatagatcCAGTGATAGGCTCAGAATCT TTAGGTGCTTTAAATAAAGCACAGTTGAAAAGAAGAgttttaagttgttt ttttatgagagtTAAGCTTTAGCTCAGGACCTTAGGCtctaaaagctaaa aaatgttaCAATAATAAAGCCTAGAATGTATTACGCAATTCTCGCCCGTG CTTTAAAGTCTGAAAAAAAAGACGTTCAAATGCCCAAAATTTTCGATATA TTTCGGCGGTGATTGTAGAAAAAAACTTCTGGAATATTTTCACCCTCATT TTTAGATTATGAAGATTCAGAGTTGAGCATATTAGGGGACAGTGATAGCG ATGGTTTGGATACTTCGGATACATCAGATGATGATGCTGGTAGATGGTTC AGTGAAGGAAGTATCTCCAATGCTTCCTCTGATTCTTCTCTCTACGAATC TTTCGGTGAGGAAGGTAAGCTGTTGTTCTctcctttgtttttctttgaac tGGGTGTTTATATTCATGTAGAATGAAgtcaaaatcactaaaattgtgta aaaatcaaatttgttacAGAGGTTTAGAGGAAATgttcgaaatctaaaaa aaaactccACTTCAAGGAAGCCGGGAACAACCTGAAATCTATTGTGGCTG acataataatttttttctactATTCAACCTGATTATTATTTTGTGAAAAC ATCTTTGGCCAGATAGGAtgttaatacacgttttttacaagaacaaacta taaaagaacaaaAGACTTTAAAGGCCCAAATATTAAGAGAAGAGAAGTTA AGAGCATTATAAGGTTTTGTGAGCTCTAAAACACCGGATTTATtaggaaa acggacaaaaatgcttaaaaatttaagaacatccgaaggctttaaaaatt ttgtatgttcttataaaaaaaatgtactcGAAGTgtgtaattttttctaa tttttttaggAGAAGCTGGTGGATTTTTCGAGGTGAGTTAACTTTTACTG TATTTagtattttcacatcaaaataaactgggagtttctaaacatcaacc agaaatggcgaccacgaccagcgaccacgaccggcgaccagataaatttg ggttatcaaGTTTTCCTCTTTCTTCACCGTAGAGTCTTTCtcttatgatc atttatttatcgaattgaagagtttatctggtcgctgttcgtggtcgccg gtcgtggtcgtcatttctggtcgacgtttagaaactcccctttacacgtt ttttttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtctt ataaaaaaaatacgtgtatcagttttgaatttgaaacaATAACTTCAGCT GGCAAATTTTCGTCTTTCATTGAATGTATATGAAATTTTCAACCATCGTG AATATCTATAAGTCAAACGAGTATTGCtataaattttataagaactctct ATAGAGATTTTCTGATTGTTTAGATATGATGATGATTGTTCACCTACAAA TGAGAACTATTAGCTCAAGACAAATATTCCTCTATTTGAATTTTCAAGCA TCTTTCTTCCTTCTTCAAAGCATCATAGAAGGattgttgttttttatatt ttgaaaagtaTTTGGTTTTTAGTATGATGTATGGTTTTGATAATTCCTCG TTGTGGAAAAAAGGCCAGCGTTTCTATTTTATGCAGATGTGTTTTTCTTA GTATTGGTGTTTAATTGCCCTTAATAATTAATTGGCAATtacttgaagaa aaaagttcacACATTTTCGAATCTCTTGAATGACTCAAAAGAGCATTCGG TGTGTTTCATCAACTTGTTATTGCTTGCTGCTATTTTTTGCCGCTAATTA CATCTTAATTGCTCTAAAAACACGCTTCTTTTTTTACGAATAAAAATCGC ACACTAAAATAAGACACTATTTTTAACTACACATTGATGTTTAGTGGCAT TATTTCTTCTTGGATATTGAAAGTAAGAATTTTTATTATTGAGGAAAGGT TTTACTTCGAGTCTCGACAATTAATGATTGGAATTATGTTTAAAGAGTTT TGATATAAGGCCGGAAAAAGATCTAGTCCCAATCCACTATTATGGTGCAC AAATGACGCGATAACTGTGTCTTCAGGTGGCTTATATCTCATaatgaaat aatattttttttcactttttcagcTGATGAATCaacatttggaaattttc aaccATGAGGCGGACTCCTTCTTCAGAGTCTCCTTACGAGTAAGTGTTTT AATGATATTTGCTAATGTGATCTCTTTCCTTTTATATTGATCTGGGATGC TGGAATTGATGTAATAAGGCAAACTTGAGCATGGTCAGTCATGAATAAAA CTGCCAAAATGTCGTCGGCgttagtgttgatagtttcagCAGTTATTTTG ATGTCAAAGAACAATTGCCTGCTTAATGAATTTCTGCCAAAAGTACCAAT TTTTTCAGAAGCTCACAATCCTAGAATTTTATCCATTCATTTTGGCACAG TTGAATTTAATTTGTGACCGCTGGGCTTATCTTTCTCAACAAGGGGTGTA CAGGCGATATGGAATACATACTATCTTAAGTCAGTTTACAGAAGTGTGGT CAACCTTTTTTGCTGCGGTGTTTTAGGTACCACTTTCAAGGGAATTACTC TCGTTAGAGCATCATTTCCACttgaaagtcaaaaaaattgcaagcTGTTT ATCTTAAACAGATTCTTCTAGGTTTCTCTAATATTTATTACCCCTTTGTT TTGTTTAGACCTTATACGATACCTTGATGGAGTTTATGGAGGAACGAGTT GGACCTACACCAAACCATATCATCCAATCTCTTCCCACTATCAAAGTCAC TCTCGCTCAGCTTGGTACGTTAGTTAAGTTTCGTTTGGATTTTGTTATag ttttttgagatattttcctAGCTTTTAATGTATAGAATCTTATAACAGAT CATTGTTTCTGTCAGCACCAAGCTCTGCTAAAGGAATACTATGATGTGAT GATTTTACGAGCTTCGCGTCGTTGAACCTCGAGTTAACAAGGAAATGGTA GTACCTAATGAAAGACCACGTAAAATAATATGTTTGTTATTAACCGAgta atttctatttcttttcatttagcGACTAACACAAGTTGTCCAATTTGTTT TGTCGATTACGAACCCAATGAAGAGTTGGTGAAGCTACCTTGCAATCATT TGTATCATAAACCATGTATAGTTAGTTGGCTCAAACTGGTAAGCCatctt tttgtaaaaagtcCTCGAGGAAAATaacatacagttgactctctctaatt cgatcttcaagggatcgaggaattttcttcgaattagagaaagattcgaa ttacagaaagtgttttatactaatttctagctaaggggacaaatattttt gttcgaattatagaaagattcgattaGTAGAGGCTCGAATTAGGGAGAGT TCACTGTAGTTCGACCTCTCCCTTTCTTTAACGTGAAACAGTTTTTTGAC TAAGCGGATGCTGAGAAACAAGAACCCTGCCACACTATGACTCAATTTCT AATAACATTGATTAGAGAATACCCCTGTTTTATTAACCCTGTTATAAAAT CAATTGCGTGGAAATTAATTAAAGTCATTATTGATGAAGATTTGCTTGCT TTTAATGGATAAGGgtttcaattttaaagttttagtGGGTATTCTCAAAC TTGTATTGTATTTTCAATTGGGATGAGAATtcagtgtaattttttttgag acCTTCTTTTGTGTCAATTTAAAACCCAAATCTCAATTTATGAAGGCtat cattatttttatttttttagaaatccaCTTGTCCCACGTGCCGTTTGGAT TTGAAAAAAGACGCACCAATAGAGANNNNNNNNNNNNNNNNNNNATATTT TAGTCTGGTGGTCTGATCAACACTGAAATTTTCGCAGGATTAGCTACTTC AATACTATTACAACTCAACcgaacttttcctaatcaacCACTACATCACC AACAAGTTAtactttctgttttctttttctgcAATTTTGCGATCTCTGTC AGTATCCTTGAGTtctgttttgtgttttgtttctacagttTTACGTTTAC AATCTGCAATTTTGTGAGCTTTGTCAGTATtcttgagttgttttttttgt gtgttttgtttctacagcataattttttttcatagaatataattatcttt ttatttaaatatgattatttttacataggacgaatagccattgtaaaata tggaagagcctgaaagacaattaataataataataaaaataaataaaaaa tgaatatcaCTTACCTCGAGTTAACAAGGAAATGGTAGTACCTAATGAAA GGCCACGTAATAATATGTTTGTTATTAACCGagtaatttctatttttttt catttagcgACGAACACAAGTTGTCCGATTTGTTTTGTCGATTACGAACC TAATGAAGAGTTGGTGAAGCTGCCTTGCAATCATTTGTATCATAAACAAT GTATTCTTAGTTGGCTCAAACTGGTAAGCCATCTTTTTGTAGACAAAAAG AGTCCTCCAGGGAAGTAATATACAGTTGacaattcgatcttcaagggagc aaggaattttcttcgaattacatAGTGTTACAAGTGTTTTATACTAATTT CTAGCTAAggggacaaatatttttgttcggattatagaaagattcgaata gtagaggttcgaattagggagagtcCACTGTAGTTCGACCTCTCCCTTTC TTTAACAAGAAACAGTTTTTTGACTAAGCGGATGCTGAGAAACAAGAACC CTGCCACACTATGAATCAATTTCTAATAACATTGACTAGAGAATACCCCT GTTTTATTAACCCTGTTATAAAATCAATTGCGTGGAAATTAATTAAAGTC ATTATTGATGAAGATTTGCTTGCTTTTAATGGATAAGGgtttcaatttta aagttttagtGGGTATTCTCAAACTTGTATTGTATTTTCAATTGGGATGA GAATtcagtgtaattttttttgagacCTTCTTTTGTGTCAATTTAAAACC CAAATCTCAATTTATGAAGGCtatcattatttttatttttttagaaatcc aCTTGTCCCACGTGCCGTTTGGATTTGAAAAAAGACGCACCAATAGAGAC CATCGATTTGACCAACACTGAAATTGATAACCTTCTTGGCGGTGCGGAAA ATAACGATGAAAATAATACGAACGAACAAGCGGACACTCTTCAACAATCG GACACTCAAACAAATAGTAATACAACACGTGGTATTTCCATCTCTTCGGA AGACGACATTGAAAATACAAACACAAACACAAACGAAGCGAGCGCCAACG TGCAAGCGCATCGAATTTTCTCGCGAAGTAGTTCACCCATACTCATTGTT GACTCGAGTGAAGAAACAGATAGCAATGCATCGCCATTCAGTTCAAAAGT TTCTATCGTTGATGCTACAAGGCGAGAACTCAATACTGGTGCACGACCAA GACTGAATAGAGGTGAAACTTCAAGGTCCAATGAGGGTAGCCAAGATAGA CTAAATATTGCTTCGTCTAGCAGTAGCCAAACCAAAGGAAATATTGATTC TGTTTCCAGGCTAGGCAACAGTGAAAGCGACCTAAATAGACTTGAAAGAT CTTATGATCAAAATAAACCACATTTTAGTGGGTCTAGTAGTAGTAGCAGC TCACGAAACAAACTAGATACTGGCGTGATACCAAAACTAAATAGAGGTGA AAATTCATCGTCAATAGATAACAGAATCAATGTTGGTGCAACAAGCAGTC AAAACAAACGGCAGACAACAACTCATACGATTAGCGAAGTACCGAAAAAA CGCAAATCTAAAGAAACGGAAATTTGGTAGTTTTTGTTCCATGATATAAT AGAGAAAAAACCTGGTTTTGGTCTGGTCATCTTTTATGGAGCTGATTCAT ACGGTGGCCAACAAATGGCTTGTCACTGGTGGACCACCGTGTCTGCGGTT AACCGAATAAAAACGAAAACTGAAAAGGTGGCGTTGTGACCGGTATTTGA TCAGTGCAATCGATTGATATCAGACGCATGTTTACCTTTATATCAAAAGC TGAACGATTGATTGTGACGCTTTGACTGAGCGTGGGGttagaaatattat ttttagtTGCTTTTTGCACTTTGCGAACAACGAAATTTAGCGATGTTTTA GTTCGCTTCAAAAGACATTTGTGATACTAACATCATTTGTGAATAGGTGA ATATGATAGGATTTCATAATAGGTCAGTTATTTTATGGGCCACGAGCTAC TGAATTTACAAAAGTGGCAGGACACATACATTACGCACACTTTACTGTCC CAANAGAATCAATGTTGGTGCAACAAGCAGTCAAAACAAACGGCAGACAA CAACTCATACGATTAGCGAAGTACCGAAAAAACGCAAATCTAAAGAAACG GAAATTTGGTAGTTTTTGTTCCATTATATGATAGagaaaaaactggtttt ggtCTGGTCATCTTTTATGGAGCTGATTCATACGGTGACCAACATATGGC TCGGCACTGGTGGACCACCGTGTCTGCGGTTAACCGAATAAAAACGAAAA CTGAAAAGGTGGTGTTGTCTCCGGTATTTGATCAGTGCAATCGATTGTTA TCAGACGCATGTTTACCTTTATGACAAAAGCTGAACGATTAATTGTGACG CTTTGACTGAGCGTGGGGTTAGAAGTATTATTTTTAGTTGCTTTTTGCAC TTTTCGAACAACGAAATTTAGCGATGTTTTAGTTCGCTTCAAAAGACATT TGTGATACTAACATCATTTGTGAATAGGTGAATATGATAGGATTTCATAA TAGGTCAGTTATTTTATGGGCCACGAGCTACTTAATTTACAAAAGTGGCA GGACACATACATTACGCACACTTTACTGTCCCAACTATGTTCACCTTTCC ATTGCTATTGTCCCTCCTTCCTACCTCCTCTTGATCTTGCAAAACTTATA CACattacacgtttctttttttaaagcaaatcAGTGTGGCCTGAAAATAT TAGATATATTGTGTTCTTAGGTCTACTGTATCGTACTGTGACAGAACGAT AGATACAAATCAGGTCAATTGATCTCTTTGCTCATGAAATTAATGCCTTT TAGAAATCCAAACTATGATATAATATTTAGCATAATCAATTATAACCGAT AGATAGTCATCagggtttttttatatttttgcaatatttatAACAGATAG TttgctttttcataaatttctccCTTAATTGCTGCTAGCTGCTTAGTGTA AAGATGAGATGAATATAACAACTGAAACCGATAATAAGTCAATAATTTTA TAAAGCATTCATGATCAGATGCAGTTTGTAAAGTGCTTCAGGACCGTCTG AAAAAATTGTGATTCTGAAATAAGTCGCAGaggaaaagaaattcaaaaga cTAAAATCACAATTTTTACGCACTTATGTTCTACAACCTTACACATTTGT TTTCTAATGTATTTCATCATTCTTTGAGTTTGTCAACCATGATTGTTTTG TATGCATCCCACCGGATTTTTGCGTGTAGCTTCTCCAAAGTGGGCGCATA GGAATTCCTCTCCTGTGACATCAGTTTAGAAATAGTACAAAAGTCGGCGT ATCTCAttagtttgtttttgttgatcAAAAGACACTCAGCACCGTTGCTA ACCAAAATTGTTTTCTCCGTTACTAAGGCTTTCGGATAACTGTCTGCTGA ATCACTTATGATTGTTCGTACCATGTTTCGAACGCGCGGGAGGAGCGAGT CCAACCCGTAGATATCCTTATGGTGGATTGTGCTGACTACAACATAGTCT TGATGTCTCAGATCGTTTTTGATTGTTAAGTGAGGCAATCGACGAAGAAA GTGATTGGTTTGAGAATTATTGAGTGTCTTCTTAGAATCTTCCGTAGAAT TTAGAGAAATGGAAGGGATATCAGAACGTCTCATATAAACACTACACGAA CCAGCTTTGACGATGTAAATGAATGGAGAATCATGAATATTTCTTTCAAT GACGTCACTTTTAGCGTAGAATTCGACTCTCGTCGACTCGGTGGCGTTAA CGAGCTGCTCGATTGGATATGTCTTGAATAAGTCGATTGATTCGAGTAAA AGCTGTTTTGATAGTTGTGTCTCTTGTGTGAAAAAGATAGTTTGAAGATG TTCCCTTTCCAGTAGAAAAACTTCAACGTCAGttttacagaccagactat ACTGTCGTTTGTTGGTCTGTAAAGTCTCGTTCAGATCGGTATAAAAGCCA TGGCTCAGTTCTTGAAGATAACGTTTTCTAACGCCCTCAGCTAAATGAAg tgtttttacttttgaaacaaGTCCGGATAGGATGAAATAAAACCGGTCAC TTGTGCGATTTTGTAAGCATATCACCCTTCCCGGATCATAACTCTCATAT CCGACCATTTTTGCCAGTCCGTCGTGTTTGTCCCTGGAGAACATTTGGAA AACTTTGTATTTGGATAAAATGAGCGTAATTTTCTTCTTATCTAAATCAC TTCTTCGTTCGGGATGAACTTTCAAACATTCTTTCACGTCATCTGATAGT TTGTTCAAAACTGAGAAATTTCGTGTATCGAAGTTGATGCTTGGGTTATT TTTCTTTGACCGAATTGGTGGAAGTATGTTTTGTTGTCGATCTTCAGGTC GTCCAACTCCGATCTGCATCAAGAGTTTGTTATCATACAGTTTCCAGTAG CGCGGTATTCGACAAATAATACAGACAACTTTTACTTTGCGACAAAATTT GTGTAGTGAAGACTGAGAGAAAGCATGACATTCGAAGCTCGTATTGGAGT TTAAAAATCGTTCAGTTTTTTTTACAAGAGCTTGAGTAAGCAGTGGAGAA ATGATCGCGTTTTGCGATTCCTCCACGAAGCGACGGATTTCATTTTCACG TGTTTTCAATTCTTGTTCTAAATTCCTTGACAGTTGACTTGGTTTAATTT GTAGCCTCTGGTAAACGGTCTCTTCCTTACGCAATATGAAATCTCTCGTC TTTTTCTTGGTCACCGGAGGCTGTTGATAGTTTAATGGTGATAGTCCAAT CCCTTGATTTGCATCTATCGACTCTTCGTAGTCTATATCTAATATTTGTC TTTGATATGCTTCTTGCATTTGTAGACTATCAAATTATCTTCAAAATGCG GGTTTCTTCAATTCTCATGTATTAGAATGCGACACTGTTTTTGAGTTGCT TTGCGGGATTCTTGGTAGACGAGTTAGACTGATTTCACACGTCTATACAA TAGCCATACGAGTCTCTCTTGTGTATTGTATTCTCTTATCTACCTCGCGT TTCTGTGACAATCCGTACTTTAAAAACAACGTCCTTTTTTTCCTGACATT GCTTTATCCTTTCAAAATAGAAagtgagattttttttattcctCGTATAT TTTGATCATAAAAACGTACGAAAGGCGGTTTCATAAACTGTAAAAAAGGA GAAAGGATTTAGCACGATGCTTTTCCCTTGGACCTCTCTAATCTTGTTAG TTTTCATCCTTTTCTTCTAAAACCGCGAGAAATTTTTCGTTCGCAATAAA TATTGATCAACTGTTTTGTCTTTTAAACCAGACGATATTTTTGGATCACG GGTATTTGAATGATCTGAAGATTAGaatgctttctttcttttcatcttAT CCGGATACATAGATGAATTTACAGTACATGCAATCGGTGACGAAATACTT Aacacaaaagggaaatccaccgggaagttttgaaaccacaatcgatttgc aagtgctctaaagtaggttcgaagggtagagttttaactctgagttttaa cgctag
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00014668TCONS_00014668Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000197supercontigsc0000197:52745..63000 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.36 12.45 5.16 3.48 40.74 31.79 17.33 18.23 16.34 12.74 28.75 37.45 49.71 55.36 36.17 32.36 13.75 22.08 17.26 12.33 14.83 14.02 20.94 20.73 16.45 17.72 8.54 10.63 14.34 15.62