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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000116_pilon:480022..488369+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14113.2.p1 ID=MSTRG.14113.2.p1|Name=MSTRG.14113.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8348bp|location=Sequence derived from alignment at sc0000116_pilon:480022..488369+ (Clytia hemisphaerica_ch_hm2_pilon)
aaaagaatgatatGGATGAGAAACTATTTTCAAGAAAGCATATTTCAAAG
AATAATTCAACTGTACGATCTGGTACAAAGACACTAAATGAATACCATAT
AATTGAAAAAGAAGAGAACAGAGCCTCAAAACTACGTGAAAAAGGACTAA
CTGATTCAGAGATTAGATTGAAGTTAAAGCTTGATGATGGAATTCTTAAG
GAGGTAGGTTGTCAAGGTTGTACCATTCATGTAATTTCTTTTACTTACTT
ATCTTATATACATTGATACTGTCAGTTTTCTCTCAGTCAGATTGTATTAC
TTAAAATAAGTTTATCTAGCAGTCTAGTGTTGGTTACCTCATATTTCCTA
GAACGCAACATTCTAGGtctatcaaataaacaaattacTGCAACCAGGAC
CACCCAGGACCCCAGAGGCTAGCACGCTCAGATGTCGCCAAATTTTTCCA
GGCGTTTTTccagacaaaaataaacagtCCAGTTCACTgtgtaattttga
attttagtatCGTAACTTggtctcgggtaacttaatgcatgtcccagaat
tgcattaatttttccgcccaagttccagtccctaaaccataataaactat
acatttttggaagcatatttggatgtagaataccgtattgggtgtaactt
taatttttttctcagcagaatttgagtttttttaagaaaacgtgattatg
agGTCATTATttattctgggacatgcattaagttacccgaggtccaggct
tcggcataagaaaaaagaaggcgtgtgatcatcgcacgcctacgtagtaa
tttttagtaatttaggcgtgCGAATTATGGCACGCCTCATTTTCTTTAGA
CGTGCAATCGCGTGCgatcgtttttttcttttattttataaacatcATTA
ATAATGATGAGGCTGAAACTTTTGAACAATTCCTAAGAATGATCTTTCTT
TTATCTACATAAAACTAGACAACAGGAAAGAAGAAAGTGTATATTCAATC
ttcatatttgaaaaacaaaaacagaaaccaaaaGAGCACTGAATAATCAC
GAAGGAGAATACTTTACTTTAGGAAAACAAATGAGAAGAAGAATCATGCA
GCAAAAGTAACTTTTAAGAAGAGCTAGTTTATTGTCATAAACCAACGACC
TCATAAACATAGCATGCGAGagggggagtttctaaacatcgaccagaaat
ggcgaccacgaccagcgaccacgaccggcgaccagataaatttgggttat
cgagtttacctgctctctccaccttagagaacatccaaatcgagtcctga
tgtggctttcaaatgaaccactgagcacgtggctgagaattactctagct
agagaatactaaaagtgacttttgacgttaccagtcattttctagacaaa
gtgacactttttgacaaaaatattgacagggcaattaagtgtgatgcctg
taaactttattacaccaaatattttaattgtaccgaatgagatgccttta
gtatgaatagatagaaattgtcagtaggaaaaagctgggaaggccagttt
tagagatttcaatctcatcaattattatATTGTCCTTACactgtcaaaat
gacttattttgacaaaataatgatctgatgatcaaatataaagcttccta
aataaattccagcacaaattttgtcactaattaatttgatgccgaaaata
caaaaggatagaaatttacgctctattcaagctccaagagcgttgaaatg
gctgctctacacgttttgcacgtggctttataatcactgtaggtgagaca
ggggtgagctttactcttcaattcgataaataaatgatcataatagagaa
agactctacggtggagaaagaggaaaaactcgataacccaaatttatctg
gtcgccggtcgtggtcgctggtcgtggtcgccatttctggtcgatgttta
gaaactccctgcGAGAGGGAAGGAAAAAGATTTGAGAGAGGAAAAATCAT
ACAGCaaaagtcattttttaaaaaggttttagagAGACGAAAAATTGTgc
agcaaaaattatttttgagaaaggcTTGTTTATTGAAGACCAAAGCATAG
TATGAGAGAAAGAGGAGAGAGAAGATGTGTATCCAttagagtaacttttt
tataagaaattttgtatACATAATTATAGCAGTTTGAAAGAGTAAAGGAA
AGTTTATCTTTCatctatttggttcttatgattaaagtagaaaatgatat
ttgattttctttcaacaagcagaaaaaatatttctagaatAAATTTTTGC
ATGTGCGATTGATCGCACGCCTCGCTAGGTTTTCATGATTTATGGCGTGT
GATAAATTGCACGCCTAAAAGGCTTTTAGGCGTGTGCGGAGGCGTGCGCG
TGCGATCGCACGCCTAATATGCCGAAGCCTGgaggtctaatgtcaacatc
cttcatctaattctgacacccatTAGagctgaaaacaataaaaatgccga
aactatttttctttgcttggtgatcagaagaaaaatcctttttcaatcag
tgattccaactttcatattattcagTTATTCTTATCACTAtaaaagaagg
gtgtcgaaattagaaaagggatgttgacattaaaAACCAACTTACTTTAT
GGTATATTATGCTCTTTGTTTTAGGATGATCTCACATTCCTTGAAAAAGG
AAAACTAATTGAAATCAAGCGTAAATTAACGGAGTATCAACGAAGTTTAG
AAGAACCAATTCGATTCTCTGATGTTGTTGTTAATTTTGTCTTCAGAAAT
TTCTGGATCGTATGATGTCAACCATGCAGTCAAAAGAGCAAAAACTGGTT
TGTAATTCATACAGTGGACACTACCTATTTCTAACTTtcattatttgaat
ttttcttttatttgaactATAAAAACATTGATCCCCTCAGGTAAAGAGTA
GCGTAAAATgctctccataattcgaatctttctttagaTAGAAGAAAGCA
TTTTGTCCTTTGAAGGTCTAATTAAAGAGAGGCAACATATCGTTTTTAAC
CTTTTTAGCGCAACATTTTTCATCATGAAAATGCTCAACTTGCAACTTCA
AACTTACATGAAATCTTGTAACTTGAGAAATAGacgatacacgctttttt
tttaataagaatacactttataagaatgtccatgatgaaaatggccaaaa
aactaagaatatgctatgaatatcaccatcatggaattttgctactgaag
ctaagaatgccattttaagagcatttccaattataaattataaattatcc
ccaagttaggctcactccttttacaaaagtgcgattttatgcttgagacg
tatgaactaaatgttaaatctagtatgaattaggatcctaacctaagaat
gtgctataagaatattttaggatgattttcccaaaaaggttaagaatatc
catgatgaaatgttACCGTCAaatgctctaacttgggacgattggtcgaa
acatgggactgttgcatatcttgtttgtattttcacttactgtaaaatcg
aaagagaaatcgtgtatttttaaatacgccgttccttaactcaaatcaaa
tgactttggaggctCGGTGAAATGCtagccaaattgccgtcccatgtttt
gtcagatagtcccatgttagagcagttgacggtatactttttaaaaatgt
accCTGCTTATATATacccttttaaatcaagtggctCTTAATTATAGGAT
ATGGTATATTGGCCAATTTTGAAGGTACATACACGTCACTTTGGTTTAAg
agttaaatgaaaaaaataaagttctctaaaaaatgcaatttcttaggaaa
ttagTCCATaatactgaaaataagaacattttaagaacattttaagaaca
ttttaggcttaaaacctaAACTTCCAaagccttaaccctattcaacctag
gcttttaggggcggttcagaactagggggggggggcttttcctgcaCCAC
CCCTTaatttttgatctagtgggtctttttggatgaaatttggcacacaa
gacccttgtcacgtaaggtaacttttgacaaaaaagttttttgatgacgt
cactcatcatgcccaaagtgagcaaaaaccgaaaattgcctttgttctta
taaatagctattgtattctaacaaaagctttagcaaaaagttgcctgagt
ttaaaatgcttattttatcctaaatattcaataaattacggtttaaagga
tatatttgacattaagaatcaatttgtattggaaaagtgtcaattttttt
gacaccttactgtcagaaatgtcatcatgctcaaggtgtgaaaattttta
ggtgtcaatttttttttattttgaagctaaataaaagttaggaatttaca
gaaaatttcacggcaaaagctctattatttcaggagctattaccaatagt
ttgacctccgaacagaaagagcccccccccctagttcgaatagggttaaa
aagtttttgagacGATtagtttttaatgctttatttcctcattcatcaaa
tttttgaattacaagctttttgacaGGAAAAACAGTGTCCGGAAAAAGAC
GAATGAAACAGATTGTTAAGTAAAATATTCAAACctcattattttaaaat
attgagATTAGATCTTGGATTTGggcctgttttactttattttgttagtg
aattgatttgaagttttaccgcTGGGTAcctttccatcattcagtcaggt
ccgcgcaggaGACTCTAAGTTATTCAACGagctataaacgagcttctaac
tcctttcTATAAAGTTTGaacgattttcttaaaaaacttagaaaaaagaa
CCGTGACACTTAAAGGGCTAACCTTGATTTCCAGGAAAATTTGTCTTTGG
TACCACCACCCCCTTTTACCTGGTGAGAAAAAAGGAACCTGTATCCCTAT
TTTCAATCTGGTTACCAAGATATGGACAAAATATGGATACTTCACCTGGG
AAAATGCCTTTTAATAACTAGCACTAGCAGCCAAATCCACCTCCCCAAAA
TGTAGAGAGCTAAAAGTCTGGAAAGTTTTCTGtgacatttcgattttttg
aattagaaaatctagaattcaaaaaatatatttctgaaAAGTAATCTgat
tatttttcaagaattttttacaGATAATTAGGaatttttgttctgatttt
ccgaAATTTGAAAATCCTTACCATTTTTACCCACCAATAACCATCAGAAC
AGAAATTCAAAACCAGGTACTAACTTGAAGTAAGTGATAGACACCCCAAA
TATAGTACCAGGCAATACTATTTTGATGGTTATTcaaaattagacaccac
cacctggcTATGGGTCAGTATCCTGCAGCTATGCCCTCCTGTATAGAAAT
CAATATACAAGGTTTGAGAATGTTTATTGATGATGTTTTCTGGACACATA
Aaatattgttaaccggttactttttcgaagccggctacacggctttttgc
gcaatgcaattggttcttttcgtaTGACGACGGGCCTATACACTGCAAAG
TTGTgtaagctcggtcgttacttgacagcaggcaatatttctcagaaaag
ccctcactaaccggtcattattgtcaGTCCAGTAGTGTGGTGGGGCGACA
AAAAATCGGGCAAGCTGGGGAggcaatttgagaaaattttgattttggcg
ccccctgctaaaaaataaataagtttgCAAAAATAACGCGAGCAAAGCAA
GCACGaaaatttttgggtttttacTCTCTTTATGTAGAAAACTGCCAATT
AAGGTGCAAAAAAGCAAAagggcgccgaaattagtaataaGAGACGTCTT
TTTTAGCTCTTTGTATTTcagcgcccccccccccaataccaccacgctac
tgattATTGTATTAGTGTAGACTAAagtcattttgttttcttttcagatc
TTTCTTTTGACCATCCAGTCGTTGCAACGTTACGTGAATATGAAGAAAAA
GTTAAGCTCAAGAAATTAAGAAAGTCTTACAATCTGAACGAAGAAGATGA
AGTTGAAGTTGAAGAAGGTATCTCATTAATCTTTCTAGAGCAGagcgcaa
cattttttcaaagatgtgaaaatttgaaattcaaaatttcaaactaggAT
AAAAGGGCCATAAAAGCTTGTAGATTGAgagtttaagggctctgatcatA
GTCAGAAAGTTTATTAAgggatttgaagataaaactgttgttttggtttt
tttgacACTTAATAAAAAACTGCCTTTACAAGTTGTTTGGTTATTCATCC
TGTCAAGAGTAATTACTAGTAAGAATTTAGTTACaataatgacgttatga
actttaaaaagacgctgataaaatgttatattaccttcttcatcaaaaag
tgctaagttttaatgggcaattaacctttttgttagATTAAccattttca
agatttcgagacaaagaagcttttacaaaaattttccgaaaatctctttt
tagtttggttaaagatgaaatgttttttcttcgttgaaaataaggtcctc
aaagGTTGAAAAACTCTTCTtcacaaaagtcttcatttttttcttcatca
aattttttcattatgatttttaaatcttcagattcaggaatagttggtcc
aacagaaaatgtataacatgccatagttttgttgctTACATCAGGCAGAA
AACTATATTTtaatcagggttgctttagcttgaaaattatgatttttggg
tcgctcggacatgaagctatttgggccggacaatgtccgatgtccgaccg
ttatttcgagccctgggcaaatataaaaaaaacactatgGTCAGAGAGCC
CTTAacaatggttttggtaccatcggaaagatattttaatactctttcta
aaaatatgCGGTTTATGGCCATTGGCCAGTCTTTCTAAAAATATGCGGTT
TATGGCCATTTAAATCAAGTGGTTAGGAGTTATAGCCTTAAGTCTGGGAC
TTGCTATATTGGCAAAATTAAACCGTGTATACCGTGATTTTTAAAGGATA
TAGTTTCTACCTCAAATAGTCCacacaatttgaaattaaaatttgacttt
AACCTTGAAAAGACCTACGTTAAGTACGACTTGAgtagaaaaagaaagat
attttatgaaacaagaaaaaaaaaagaattttcgtatctctttttccaaa
tctctaGTCTGACAAAAACTTTACGCTAtctatttttaattaaaatatcG
AGTACCTTAtacattttcgaaattttgtggTAGATTTTACTATCTAACAC
ATACAATAGaagtgcaaaatttgtgtaggtgAGCAGATTTCTTATGACac
ggtaattatctttttatatctaGCGACTCTCCTGTCTATACTACTATATT
GTCCTTTTGCATAAGACTCAACTTCCTGTACTAGAATTTCACTGGCTTTT
CCGGGACTTTTCCGCtttttttCCGGTATATccggcatgagattggaaag
atttttttctcaatgtatatatgaaaaatcttttttacttACAAAATTGC
CGAACTTTCCAAAGCTCATTTTTTCACTACCCGGAGTCCCGGACTTGGAA
AGTGTCAGAGGAATCTTATTGAGGAAAGAGGAATCTTATgcaaacccagc
tggcacacaacgtcgtttcaacgtttatctaacgtctacaacgtctatat
aacgttagatgaacgttgaaacaacgttgtgtgccagatggGTAAACGAC
GGTAGTAGCAAATGGAAATTTTCCATTAAAAACGCATGCACTGCGTGGTT
TTGAAACGCCGGTTTGATGTGCCGTaaaaaaatgtacagcaagatttcga
aaaaagtacaccacagaaaaaagaaagTCGTCCCAAATGCGCTGCAAACC
TGAAAGTTTTCACTTTTCCTTGTTTTAGAAAGGTGGaagatttctcttta
aaaactctttttgtttaaccctttgaatttttttcatttgaacaGAGGAA
GAGAAAAAATCATCTAACGAGACTATAGACATGGAAGACAACGACAAATC
AAGCGATTTCATTGGTCCATTACACCGACCAATCAACGAGCGTGTCCAAC
CCACGCCTGAACAACTAATATATAAGAATCGTTTAGAGCTAAACCAACTG
TTGGAGATTGAGAAATTCAAATCATACAAAGCTGGTAATTTTGTGGATAG
GCCcaaacgcgaaatttaatcccctcgAAAGTTTATTCCGTTAAATTACA
CACTCTTATTGAAACCCTGTTTTCCAAATGGTACATTAATGGTCGAAGGC
TACATATGGTTGAAAGCAGAGAATGCCTAGAATGGTAGATGAGAAGTA Coding sequence (CDS) from alignment at sc0000116_pilon:480022..488369+ >MSTRG.14113.2.p1 ID=MSTRG.14113.2.p1|Name=MSTRG.14113.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1260bp|location=Sequence derived from alignment at sc0000116_pilon:480022..488369+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGTTGTTAATTTTGTCTTCAGAAATTTCTGGATCGTATGATGTCAA
CCATGCAGTCAAAAGAGCAAAAACTGatcTTTCTTTTGACCATCCAGTCG
TTGCAACGTTACGTGAATATGAAGAAAAAGTTAAGCTCAAGAAATTAAGA
AAGTCTTACAATCTGAACGAAGAAGATGAAGTTGAAGTTGAAGAAGAGGA
AGAGAAAAAATCATCTAACGAGACTATAGACATGGAAGACAACGACAAAT
CAAGCGATTTCATTGGTCCATTACACCGACCAATCAACGAGCGTGTCCAA
CCCACGCCTGAACAACTAATATATAAGAATCGTTTAGAGCTAAACCAACT
GTTGGAGATTGAGAAATTCAAATCATACAAAGCTGGTAATTTTGTGGATA
GGCCcaaacgcgaaatttaaATGTTGTTGTTAATTTTGTCTTCAGAAATT
TCTGGATCGTATGATGTCAACCATGCAGTCAAAAGAGCAAAAACTGatcT
TTCTTTTGACCATCCAGTCGTTGCAACGTTACGTGAATATGAAGAAAAAG
TTAAGCTCAAGAAATTAAGAAAGTCTTACAATCTGAACGAAGAAGATGAA
GTTGAAGTTGAAGAAGAGGAAGAGAAAAAATCATCTAACGAGACTATAGA
CATGGAAGACAACGACAAATCAAGCGATTTCATTGGTCCATTACACCGAC
CAATCAACGAGCGTGTCCAACCCACGCCTGAACAACTAATATATAAGAAT
CGTTTAGAGCTAAACCAACTGTTGGAGATTGAGAAATTCAAATCATACAA
AGCTGGTAATTTTGTGGATAGGCCcaaacgcgaaatttaaATGTTGTTGT
TAATTTTGTCTTCAGAAATTTCTGGATCGTATGATGTCAACCATGCAGTC
AAAAGAGCAAAAACTGatcTTTCTTTTGACCATCCAGTCGTTGCAACGTT
ACGTGAATATGAAGAAAAAGTTAAGCTCAAGAAATTAAGAAAGTCTTACA
ATCTGAACGAAGAAGATGAAGTTGAAGTTGAAGAAGAGGAAGAGAAAAAA
TCATCTAACGAGACTATAGACATGGAAGACAACGACAAATCAAGCGATTT
CATTGGTCCATTACACCGACCAATCAACGAGCGTGTCCAACCCACGCCTG
AACAACTAATATATAAGAATCGTTTAGAGCTAAACCAACTGTTGGAGATT
GAGAAATTCAAATCATACAAAGCTGGTAATTTTGTGGATAGGCCcaaacg
cgaaatttaa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000116_pilon | genome | sc0000116_pilon:480022..488369 + |
|
