MSTRG.14221.1.p1 (mRNA) -

Overview
NameMSTRG.14221.1.p1
Unique NameMSTRG.14221.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000117_pilon:788994..790496+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.14221.1.p1 ID=MSTRG.14221.1.p1|Name=MSTRG.14221.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1503bp|location=Sequence derived from alignment at sc0000117_pilon:788994..790496+ (Clytia hemisphaerica_ch_hm2_pilon)
CTCTGATGGTTTGTTGGTAGTGTCGGTTTTCGATGTGGGTGGTGTTTCAA AAACCGTAGAACTTTAGTTTAAAAGCATAGTCTGTATTTGTAATCTTTCG TAAAATACTTTATAATGCCTTCAACTCTAAAGTTTGACACGAAAGAGTGA AGCatttaaattttacatttttacattttaaatttttgacaaattcaaGG GGCAGTTTTATTGACTTCCAATCACGAAGGGCGAgtttctggatgggaaa taagtgactttactttttttttgtcttagaaaggttagagattctactct agcccgtcaggctttaaactcaaactCAATGGTTTTAACTTCTGcgtgtt tcaaaaaatttttatcaataggaaaaagtaataaaaacagagccttaaat gaacaaaaaaGACTTGCCAGAAATGTCATTGGTCTCCTTCCACCAGACGA AGGATGGCTACAAAGCTTGCGTCATCCTCATGTTCATAACAGCCTCCTGT GTCGTCATCCTCAACATAATGGCCCTCATATTCATCGTTACTAAGCAACG TAAAAAGATGCagaatcatcaaaagtattctaCAGGCGCCAAACGGAATG AAATGATTCTGACAAGTCTTTGTGTCGCAAACGTCTTATTAGGAGTCGGT GTCTTAGCAGATTCTGCATGTTATGTTAACGGTCAGGAACTTTGGGCAGG CGCTTACATGATTGGTTTTGGTTTGATTACGTCATTAATTCACATTGGCA TGCTAACCTTGGAGAGATTCATTGCAGTGAAATTTCCATTCAAATATAAG GAGATTAATCCGAAATTCGTTATTGCAACCTCAATTATTGTTTGGTTATT GAGCGTGCTACCAGCTCTTACGATTCGCTACAATTTCAACCTGTTCTTGA TCGTGTTATTCTCGTTACTATTGGTTTCCAATGTCGTCATCACGTGTGTG TATTCTTACATCATTTTTCATATTCGTTGCTCCAATCAATCAAAACACAA GAGTAAATTGTCGCCAGGGCAACCGTCAGCATCATTGTGGTATTCTAAGG AACAAAAAGAACAGCAGAATAAAGTGACGGCTTTTTGTTTCAGTATCGTG ATCTCATACGTGGTGAGTACGATGCCTTCCGTCATATGGTACTTGACACA CTACGAACAATCATTTACACCTTACAGTGGTAGTGTAATTGGGTCTTTGT TATTCATACTTTTGATTTCTCGGTCGCTTGCGGACCCTATGATTTATATT TTCCGTGAGCGGATTCACAAGAAGTTCACTTATCTCCATTCGAAGTTTGC GTtgaaaagtgagaaaatttctTCTACAATTTCGTCCACGGGCGAAGTCG AAGAAATGAAGCCCTGCatggaagaagaaaaatttgaacctTAAAAAACC ATGTTCATTTAAATAAATCGAATTATGTTATACGCacttgtaaaaatatt tgaatttattaagattttagaaaaatttgaaaaaattttctgtttgaatt aaa

Coding sequence (CDS) from alignment at sc0000117_pilon:788994..790496+

>MSTRG.14221.1.p1 ID=MSTRG.14221.1.p1|Name=MSTRG.14221.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=996bp|location=Sequence derived from alignment at sc0000117_pilon:788994..790496+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaacaaaaaaGACTTGCCAGAAATGTCATTGGTCTCCTTCCACCAGAC
GAAGGATGGCTACAAAGCTTGCGTCATCCTCATGTTCATAACAGCCTCCT
GTGTCGTCATCCTCAACATAATGGCCCTCATATTCATCGTTACTAAGCAA
CGTAAAAAGATGCagaatcatcaaaagtattctaCAGGCGCCAAACGGAA
TGAAATGATTCTGACAAGTCTTTGTGTCGCAAACGTCTTATTAGGAGTCG
GTGTCTTAGCAGATTCTGCATGTTATGTTAACGGTCAGGAACTTTGGGCA
GGCGCTTACATGATTGGTTTTGGTTTGATTACGTCATTAATTCACATTGG
CATGCTAACCTTGGAGAGATTCATTGCAGTGAAATTTCCATTCAAATATA
AGGAGATTAATCCGAAATTCGTTATTGCAACCTCAATTATTGTTTGGTTA
TTGAGCGTGCTACCAGCTCTTACGATTCGCTACAATTTCAACCTGTTCTT
GATCGTGTTATTCTCGTTACTATTGGTTTCCAATGTCGTCATCACGTGTG
TGTATTCTTACATCATTTTTCATATTCGTTGCTCCAATCAATCAAAACAC
AAGAGTAAATTGTCGCCAGGGCAACCGTCAGCATCATTGTGGTATTCTAA
GGAACAAAAAGAACAGCAGAATAAAGTGACGGCTTTTTGTTTCAGTATCG
TGATCTCATACGTGGTGAGTACGATGCCTTCCGTCATATGGTACTTGACA
CACTACGAACAATCATTTACACCTTACAGTGGTAGTGTAATTGGGTCTTT
GTTATTCATACTTTTGATTTCTCGGTCGCTTGCGGACCCTATGATTTATA
TTTTCCGTGAGCGGATTCACAAGAAGTTCACTTATCTCCATTCGAAGTTT
GCGTtgaaaagtgagaaaatttctTCTACAATTTCGTCCACGGGCGAAGT
CGAAGAAATGAAGCCCTGCatggaagaagaaaaatttgaacctTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.14221MSTRG.14221Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14221.1.p1.exon1MSTRG.14221.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14221.1.p1MSTRG.14221.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000117_pilongenomesc0000117_pilon:788994..790496 +