MSTRG.14618.1.p1 (mRNA) -

Overview
NameMSTRG.14618.1.p1
Unique NameMSTRG.14618.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000123_pilon:252223..253854-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.14618.1.p1 ID=MSTRG.14618.1.p1|Name=MSTRG.14618.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1632bp|location=Sequence derived from alignment at sc0000123_pilon:252223..253854- (Clytia hemisphaerica_ch_hm2_pilon)
ATTAAATTCCCTCTGAAAAACTTTTTTGTGCCATCCGCCAAAATTTATTC
CCTTAAGGTATTATTTTAAAATTCTATTTTGATTTTTTACACAGTAATTC
TTTAAAAAAAAAATGGATAAAATAATTACCGACAGAATCTACAGGAAAAT
GTTTTTAATGAATGACCTTGAAGGTGAAACAGATGTACATCATAAACTTT
TCCATAATCATCATAATTATAAATATATGATTACTGGGCCAAAGCAATGT
GGTAAGACCTCCTTACTATTCGAAATGGCTTTCAGAGCGGCTGAACAGGA
TTTTGACGTACTTTTTATCAGTTGTAATCCAATTCAGAAATTACCACATT
TCCATGGCTGCAGACAGAAACCATCAACAGATGTATTGGATAAAATACAA
ATTGTCTATCCAAAGACTCTGAAAGAATGTTTATGTTTATTGAATGGACT
TACGCATACACAAACAAATCATTACCAACTAATTGTAGTGGATGACTTGG
ATGTATTGATTTCTACGCAAAGAGCAAATATGATTCAAACATGTTCTACT
TTGATATCTCAAGTCATTGATATTGTTGCATTTTCATCTAAATTGACAGG
GTGAGTTCTGTGTTTAAAGCTTATTTCTGGGAATAGTGAAATATCTGTTA
TACTTTATTACATGAAAATAAATATGGAAGTATTTAACACGAATTGAAAT
TTTTTGTGTTAATAGAAACCCCCTTGATTAAAACCAGCCGTGGGGTCATT
GAAAAAGCAAATAAAATTTGTGTTAATTTTCGCGTGTTAATTTCAAGGCC
GTTAAATACTTCCATATTTATTTTGTTCATGTAATAAGGTAGTTTATTCT
GTCAGCCTCCAAATGATAACAGATCTGAGAAAAAACTGTTTTTAATATTA
ATAAATCAAGCTCGTACATATTGTTTTTTTATTATGTCTTTGTTTATCAT
AAAATTTTTCTGCCAATTAGCTGTGTGAAAAAAATCCGCAAAATCTGAAA
AATCATCGGAAATTGCAAGGAACAAAGGTCAAAAATGGGACAAAATTAAC
ACCATACATGAAACTGCATTTCTAAGAAAGTTTCTCTTGCAATTAAAATA
CTTTTCTTTTCTTAGAGTCGCTACCATGTTGATGTGCACTATATGCTCAG
ATATCGCACAATACCAATCATTGATCGATATCATTAATTTATGGATACAG
AACGAGATAAAGTTCTTCAGACCAATTTCCAGACAGGCAGCAAATAAAGA
AATATTTCATTTAAAATGTCATACTAAGAATTCTTCTTTGGCTGTTCAAT
CTGATAGCGATGTTGTAGGTATTCGTGCCACCTTTATAGATGGAAGAATA
TTTTTTGAATGAGATTTTTTTATGATAGGCTCACGAGATTAAATTATTGG
TTTTCTCAAATTTTTGCCTTTTTCTTTAAAAACAAACTCTCACAATAATT
AATTTTCCAAAATTCCTGCACTCATGATAGGGTATATTTTTTAAAGATCT
CAAATTTTTGCCTTTTTCTTTAAAAACAAACTCTCACAATAATTAATTCA
ACAGAAGAACCCACACAAAATTTTCCAAAATTCCTGTTACACTTTTGATA
GAGTATATATTTTTGAAGATATTGTTATTTTT

Coding sequence (CDS) from alignment at sc0000123_pilon:252223..253854-

>MSTRG.14618.1.p1 ID=MSTRG.14618.1.p1|Name=MSTRG.14618.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1470bp|location=Sequence derived from alignment at sc0000123_pilon:252223..253854- (Clytia hemisphaerica_ch_hm2_pilon)
AGTCGCTACCATGTTGATGTGCACTATATGCTCAGATATCGCACAATACC
AATCATTGATCGATATCATTAATTTATGGATACAGAACGAGATAAAGTTC
TTCAGACCAATTTCCAGACAGGCAGCAAATAAAGAAATATTTCATTTAAA
ATGTCATACTAAGAATTCTTCTTTGGCTGTTCAATCTGATAGCGATGTTG
TAGGTATTCGTGCCACCTTTATAGATGGAAGAATATTTTTTGAATGAATG
GATAAAATAATTACCGACAGAATCTACAGGAAAATGTTTTTAATGAATGA
CCTTGAAGGTGAAACAGATGTACATCATAAACTTTTCCATAATCATCATA
ATTATAAATATATGATTACTGGGCCAAAGCAATGTGGTAAGACCTCCTTA
CTATTCGAAATGGCTTTCAGAGCGGCTGAACAGGATTTTGACGTACTTTT
TATCAGTTGTAATCCAATTCAGAAATTACCACATTTCCATGGCTGCAGAC
AGAAACCATCAACAGATGTATTGGATAAAATACAAATTGTCTATCCAAAG
ACTCTGAAAGAATGTTTATGTTTATTGAATGGACTTACGCATACACAAAC
AAATCATTACCAACTAATTGTAGTGGATGACTTGGATGTATTGATTTCTA
CGCAAAGAGCAAATATGATTCAAACATGTTCTACTTTGATATCTCAAGTC
ATTGATATTGTTGCATTTTCATCTAAATTGACAGGAGTCGCTACCATGTT
GATGTGCACTATATGCTCAGATATCGCACAATACCAATCATTGATCGATA
TCATTAATTTATGGATACAGAACGAGATAAAGTTCTTCAGACCAATTTCC
AGACAGGCAGCAAATAAAGAAATATTTCATTTAAAATGTCATACTAAGAA
TTCTTCTTTGGCTGTTCAATCTGATAGCGATGTTGTAGGTATTCGTGCCA
CCTTTATAGATGGAAGAATATTTTTTGAATGAATGGATAAAATAATTACC
GACAGAATCTACAGGAAAATGTTTTTAATGAATGACCTTGAAGGTGAAAC
AGATGTACATCATAAACTTTTCCATAATCATCATAATTATAAATATATGA
TTACTGGGCCAAAGCAATGTGGTAAGACCTCCTTACTATTCGAAATGGCT
TTCAGAGCGGCTGAACAGGATTTTGACGTACTTTTTATCAGTTGTAATCC
AATTCAGAAATTACCACATTTCCATGGCTGCAGACAGAAACCATCAACAG
ATGTATTGGATAAAATACAAATTGTCTATCCAAAGACTCTGAAAGAATGT
TTATGTTTATTGAATGGACTTACGCATACACAAACAAATCATTACCAACT
AATTGTAGTGGATGACTTGGATGTATTGATTTCTACGCAAAGAGCAAATA
TGATTCAAACATGTTCTACTTTGATATCTCAAGTCATTGATATTGTTGCA
TTTTCATCTAAATTGACAGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.14618MSTRG.14618Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14618.1.p1.exon2MSTRG.14618.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14618.1.p1.exon1MSTRG.14618.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14618.1.p1MSTRG.14618.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000123_pilongenomesc0000123_pilon:252223..253854 -