MSTRG.15964.2.p1 (mRNA) -

Overview
NameMSTRG.15964.2.p1
Unique NameMSTRG.15964.2.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000146_pilon:481713..483395-

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.15964.2.p1 ID=MSTRG.15964.2.p1|Name=MSTRG.15964.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1683bp|location=Sequence derived from alignment at sc0000146_pilon:481713..483395- (Clytia hemisphaerica_ch_hm2_pilon)
TGAAAACCCCAAAAACTTGTACGTTACAAATGTGCAATTTCATTTTAGAT CAAGATCCAGAGCCCGACCAAGACTTTTTATCATTTCTTGTTGAAGACGA TACAATCCTGGATTTCATCAAAGGAGACGAATCCTTGAGAAGGCAATCGG AACGATTTCAAGTTTTTAACAGCCGTTCCTCGCTGATACAATTCAGAAGC TGCGCTGAAAAAGAAGCCAGCATTATTGGAATGGATGGTTTAATTCACAC GTATTCGTGTCGTCTTGTTCATAACAAATTTGTTATTCCAATTAAAAGTA ATCCAGACGACCTCGCTAGTTTGAGAGGAACAGAGAGGCTTCGATTACCG TTTTTGAGGGGATCCTATTTTGACACAGTTGAATGTTTGCTTGTGCCAGA AATATACACCTACTTTATCATGAAGAGGGAGAACCTTTCATACAGAGACG CAACCCAATATATGTATGGCAAATTTCAACCAACTGTTTTTCACATCATG CTACTTGAAAATGTACGTGTGTTTACATGTTTTTGTCTCTCTTGATTTTC ATGCACAAGTTAACTTTTTATTTTATGATATTTTCGATTGGAAAGACAAC AGCTGCTTTAATTGAGTCTTCAGGAACTGTTTTAGTAATATTCGCCATAG CATGTATTACCTTTTTGTAATTTTAGGAACAACTATATTCGACGAAGCCA TATCCAAAGGTAAATGGTACCATCACAATTCAGTGTAAGTCTTTAATCTA ATCTTCAGATTTTAGCAAAGAAAGGTAAATTTCTAAACCCTCCAAAATAC TTTATTCGCTGGCATCATTCATCAGTGTGACGAATACGAACAATATTACT TCTGCAGATCATCTCTTTCACTTTTTACGATATTTTAATCCTAATTTATT ATAAAGAATAACAAAACTAATCAAAACACAAAAATGTATCATCGAACTAT TTTCGTAGAATTTGAATAAGATTTTGAAATTTAAACAGTCTACTGTTTCT AGTTTCAGAACTATAATTTCTTTTGTCTACTGCGCATGTGCTCCACTTTT TTTGCTATATTTTGTTTCAAATCTTTTTCATTTTTAAGCTTCTGACGGAG ACCTATTCAGTCAAAATACTGACGGGATTGTTATCAAGACTGACAGTGAG ATGAACCCGATAAATTTGGTGAGTAGTTGATTTTTCAACAACTCTCAAGC TCCTGATAATATTTAAATTTTCTAACTTTCTCGTTTTATATTTCTATGAT TCTCGATGGCGATTTTACCATTGAAAGTTCATTTAATACCTAACTTTCCG GTATTATGCCCGCTGTTTACAAAGGCACGTGAATGTTATTTTTAAATACC ATTACTGCACTGTGCATACACGCTTTTTTATAAGACCTAGTACTTATTAG ACCTTTGCTTATTTTGTGTGATTTAACATACTTACTTCATTTACGTTGAC TCTTAGCCATCCGGAAATGACTGAGTTTTTTTTTGCTGACTTTCTCTTAA AAAACGGGTAGCATACTTTGAGGCATTCTATCTATTTTCAGCCAAATTTT CGTTCTTGGAAAGACTCGCTTGGGATGGTTCCAAATGTTGATTTGAGAAA ACTGTTAGCAAAGGGTGATGTAGATTATTCGAAGCTCGAACCATCAGAGA AATGTCGATCTAAATATATTTTCTACTTAGTAG

Coding sequence (CDS) from alignment at sc0000146_pilon:481713..483395-

>MSTRG.15964.2.p1 ID=MSTRG.15964.2.p1|Name=MSTRG.15964.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=996bp|location=Sequence derived from alignment at sc0000146_pilon:481713..483395- (Clytia hemisphaerica_ch_hm2_pilon)
GAACAACTATATTCGACGAAGCCATATCCAAAGGTAAAAAACCCCAAAAA
CTTGTACGTTACAAATGTGCAATTTCATTTTAGATCAAGATCCAGAGCCC
GACCAAGACTTTTTATCATTTCTTGTTGAAGACGATACAATCCTGGATTT
CATCAAAGGAGACGAATCCTTGAGAAGGCAATCGGAACGATTTCAAGTTT
TTAACAGCCGTTCCTCGCTGATACAATTCAGAAGCTGCGCTGAAAAAGAA
GCCAGCATTATTGGAATGGATGGTTTAATTCACACGTATTCGTGTCGTCT
TGTTCATAACAAATTTGTTATTCCAATTAAAAGTAATCCAGACGACCTCG
CTAGTTTGAGAGGAACAGAGAGGCTTCGATTACCGTTTTTGAGGGGATCC
TATTTTGACACAGTTGAATGTTTGCTTGTGCCAGAAATATACACCTACTT
TATCATGAAGAGGGAGAACCTTTCATACAGAGACGCAACCCAATATATGA
ACAACTATATTCGACGAAGCCATATCCAAAGGTAAAAAACCCCAAAAACT
TGTACGTTACAAATGTGCAATTTCATTTTAGATCAAGATCCAGAGCCCGA
CCAAGACTTTTTATCATTTCTTGTTGAAGACGATACAATCCTGGATTTCA
TCAAAGGAGACGAATCCTTGAGAAGGCAATCGGAACGATTTCAAGTTTTT
AACAGCCGTTCCTCGCTGATACAATTCAGAAGCTGCGCTGAAAAAGAAGC
CAGCATTATTGGAATGGATGGTTTAATTCACACGTATTCGTGTCGTCTTG
TTCATAACAAATTTGTTATTCCAATTAAAAGTAATCCAGACGACCTCGCT
AGTTTGAGAGGAACAGAGAGGCTTCGATTACCGTTTTTGAGGGGATCCTA
TTTTGACACAGTTGAATGTTTGCTTGTGCCAGAAATATACACCTACTTTA
TCATGAAGAGGGAGAACCTTTCATACAGAGACGCAACCCAATATAT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.15964MSTRG.15964Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15964.2.p1MSTRG.15964.2.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.15964.2.p1.exon4MSTRG.15964.2.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15964.2.p1.exon3MSTRG.15964.2.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15964.2.p1.exon2MSTRG.15964.2.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.15964.2.p1.exon1MSTRG.15964.2.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000146_pilongenomesc0000146_pilon:481713..483395 -