XLOC_007131 (gene) - C. hemisphaerica

Overview
NameXLOC_007131
Unique NameXLOC_007131
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000147:414021..420776+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007131 ID=XLOC_007131|Name=XLOC_007131|organism=Clytia hemisphaerica|type=gene|length=6756bp|location=Sequence derived from alignment at sc0000147:414021..420776+ (Clytia hemisphaerica)
AAGTTAAGGCGAGAATCGCTTTTTAACGGTTGAAGGAGGACGACAACAAG AAATTTGAATGATTCTTATTTCTAGACAATAAAATAGATCAAGaggcaag aaaaaagtaaagtagCTCTTGCACTAGAGCGAAGTGTTATGTGTCGACAT GTTGGTGTGGTAACGTGTCTTTTGGTGTGTATGCTCACACGAAGTCAAGG ATGGCATTTATACGGTATGAAATTATATTTTACCTTTTAACAAGATTAAC GATGAGTATTTGTTCACACAcctttttaatctcaaagtatcctTCAAAGA AAAGTGTATTCAAGGCCTTGCTGCAGGTGTGGTTCCATAAGGTTAAACAG ACTTGGTTGTATTTTGTTCTCAATTCATTCATAGATATCCCAAGCAAATT TTATCCTATACACGGCAATCATAAAGAGTGAATTACAATTACATTCCAAT CAAAACAGCAATACTTTGTATAAGTCGTGTGGGAGCCTTTGATGCGTAGC CGTTAAAAAGATTTCCTACACATGCTAAATCTTTACAATACCTTCAAACA AAACTGTGGGTAGTTTTgaagtgacgaaaaaaaagcTTGTACATTTCTCT ATAGTCCAACGTTgtctttttacattttttatcttAGCTAAGTATAATCG AAAGTAGACgaccttttttccgatgtgttctaaGAGCctatttcagctag aaattttgatctgttctgatcagaatttcgaaaattaatcagctagaaat gggctttttccagaaatagttcGTGCCCCCATGTtaaggatatcggatat ccaagggttaacgatttttgttcaaaagtggatatctaGGGGCTTAAATA TCTATAAGGGAGCggatgtccagggggtaaagtgtcttttcaagtaaaaa atactttactaataaagtaggatatccagggggtttgatatttcgaaaaa tcaatatcctcaacagtggagGTAAAtctttttctagaaaagcccaaaaa tgatgtgttctgacgagacaggggtatactCAAGTTCATCAAACGtcttc ttgttgtctaggtaacccttgatattttcagaacacatcttacGTTGAGA AAAAATATCTTACCAGTTTATCTTGGCAAACTGTTTTCCTAGATTTcaga acacatcaaaccataaagtagtgataagtttagggagacaaatagtgcga taaaggtttcttagaaatcagaacacatcatttgtttaaaaaattgaaag gtcataacatttggtctcctagaagataagaacacgtatttcttaaaaaa atctcttcgccggctgcttctgtatAGTAGTAGAGGTAGTAGCAAAGGAT TTGAAAAAACTGTATcgtggaaaatttgaaaagttcattttaAATTCCAG GCTCGATTGATGGAATAATCGATTTTCTTTTGTAGTATAAGGGTTAAGCT AGACAAATTGTTTCTAAAGATATGCCATAAAAATAAATGTTCGAATAAAA TTAATAGTTAAAACTGGAAATTACAATTCACAGTCTAAAATTGTGTAAAC TTTCGTGACATCGGAATAATAAATTAAAGAAGTCAAAAAAGTTCTCAGAT GAATAAATCATAAAAGAGGAAAAACcttgaaatagaaaaattagtcCTAA AAAGGAACTCCCATTAGCACGTCAAGAATATCACACGTCAGAGACTTACG GAACAAGCCTAGACTTATTTTCTTGAGTTTTGTGAGATTTATTGGGAACC ATCaatgaacaaaaaagaaaatattaacgGTTGATGATAGTAGAACAATT TGATAAGAACAATATTCTCAAAATCGCTTGGAATATAAACGGTTTGAAGC TCAAAAAGAAGACAAGCCTATCCTCAACAAAATTTtactgaataaaaaaa aagagtgtattttcACTGGAATCAGCTCCATcacaaattatcaaaaagca aagttcagcaaGAAGTCGACTCTTAGTTTAttatgaatacacgttttttt ataagaacaaactacataaaaacataaggcttcgctgaaagaacatttta aggctttgtggactcaaaaacaccttatttcttaggaaaatggtcaaaaa atattcacaaaatggtcacaataagaacatgttaagaacacttttaggct tgaaactcaaaaggTTCATCAAGTTcccatccgaaggcttaaaaaatttt ggatgatcttataaaaaaacgtttacgGGTGATGACACCCCTGCCTTTCT TGGAACagtatttctttgaaaaaaaaaagagaaaaaaatctttcccatAA AATAATTATCTGTTCTTCTAAAGAGAAAAGTTCccgaaaaaacaaaacaa aaaacacatgAGGTCGCTTTCGGGTCGCTTTCTTATCTTACCAAAAAATC TGACCAACACAAATGACATCTAGGAAGAAAATGAAACGaaggaaaattag tttcctTTCATCTAATTTTTCTTCGAATAGAAAATATCTACAACCATCAA GATTTctcttaaaagtttttaatttaaaaagtaTGTCCTCAAGATCTTTA TTGTGTTGAACGATGAAAAAGAATTCTTCAGgatcattttattttcactC TATAGTTTCCTGGGCGGTTAAAAACCCCCTATATGTAATCAACCCCCCCT AAAGGCCCCCATATTTATAAATTTCTCAGACCCGCCTTAATAACCGAGGT CGTGAACCCTGGAATAAAATGTTTGACTGAGAATGATACTGAACATGATA AATTCAtttggtaaaaattttgaactcccccTCTATATAACTATAGGGGT ATGGCCAAACCCCACCTAATAATTGAGACTTTTCAACCCCCCCTTACAGG GTTGTCTGAGAATTCGAACCCTCCTCCCCCATAAACAAACTATTCACTCT AAATATCAATCAGTGAATCCAAacattttaaaagcaaaaagcaTTGAAGT TCTTGAAGTTTTCCCGGGTCCTAGTTctactaaatatttttttgtagaaa CCAAAAGCCTTTGAGAAGTCCCTCAAAAATCATAACACCCTGCTATGTTT GACATACTAAAATTTTCCTCATTTTGTAGGTAATAGACAGTCAGACGAAA GGTTGAATTATCAAGACATACGAGATGAAAGGTTAAACCGACTGTACAAC GATCTGGTAGAATATAAAAAACAAAGCAATGATTACCAACAAGTCAACCA ACCAATCAACGACGAGGATATGAATAAAGCGCTGAACAAGATTCCTGAAA ATGATCAGTTATTTGAAGGGGACATGGTTATGGACAACCGTTTGAGAGAA GCTGTCTTGGGAATCTCAAAGAAATCAGTTGTCACTGGTGATGTTAAGTG GCCCAATCAAACTCTGGTTTATGAAATCGATGCTAATTTTGTAAATGGTA AGTTGACTCTTGGTTGCTACTGAACATTTTTTGGACGTCATATAGATGTA TCTTTATGTACCGGTTGACTTGATTCCTACCGTAGCATTGACCATTAAGT TCTTAGGCTAAAGTTCTTTCACTTTTAAATATACCTTGTGTTCCATTGGA TCTTATTGTATAGAATTATTGTATTTGAAGAGCAGTTTTCTATGGGACGC TCTGTAGATTCGAAACGAAATTTCTTTTTCCCGCTGGAAAGATAATCGTG AGTGGGATAATTAtcgaacaaaatatttttgagaaattcaagcAAATAAA GAAGAATGAAAGTCAAAAAAGGGTAAAAGTCTAAAAGGGTAAAACAATTC TCTTTGACTCCAAAACAAACCGTCCAATTACTTTACTTTAACTAATATAT TTTTACCGTTTAGTGCCGCTTTTGAAGGAAGGAATTCATGAATTTGAAAC AAGGACATGTATCAGGTTTAAATTGAGGACAAATGAACCAGACTATGTTT ACTATACGTCAAAAGAAAATGTGTAAGTTCAAATATTGTTGTCATGAGAG AAAAATCTTCTTGGTCATTGTTTCGAGTcagaaaattatcatttcatgTT GACTTGAATGATTTTTTGGTTTCCCTTTAGTCTATTTGAAAGATTATAGT TTTTGATATGGAAAATAACCCTTTAAAAAAGATAATATTTGGACACTATC AGTGTATGTCCAATAAGTTCGATAAGACCAAAAATTGGTCCTCAGTCacg ttttatatttttctttcagttgTTCATCAAATATAGGGAAAGTTGGTGGC AAACAAGAGATTCACATTGGTAAAGATTGTATGGTGCTGGGGACGATCAT CCACGAGACAATGCATGCCCTGGGTTTTATACATGAACATTCTAGACCTG ATCGTGATGAATACTTGAAAGTCAATTgggaaaatatcgaaaaaggtttt ttttttattaattcttGCATTCTTGAATCTCATAGATTATAGTTGAGCTT TTCACGTACAAATTGTCCCAAATAAAGCGTACGTTTTTTTGCCTNTGCTC TGTTTTGGGGTAACTTTGCTCtttttgagggtaattttgaatttctAGGG GATAAACTAATGTTTGTCTGGGGTAGACGGTTAGACCTGCtgcccgaggg gggggggtcaaaagtcactttgtccggggggtaaatcattgaaaattgtt atatcctccacccccaatatgcaatttttttctggaagagcccaattcaT CTGTCAAATTTAACACTTAAtatttcaaactcaaaaaactataCGCCATA ATTATTGTAACTCGAATTTGTACGAGTCTCAAGTTCATTTCGAATATAAT TGGTAAACcgtgaaaattattatttttcttttgatattgtaaGTAATTAA CGTGCAAGAGCAATTAACGCAAAGGAGGATGGGATCTCaagtgaattttc aaatttgttaGTCTTTTTGGACTCGCCGCGGTACGCTATTGAATGTCTAT TGATTGAATAAAGATTgtaatcttatttcaattattctaagCATAGTTTA AGTAatgaattttgaagattttactttgaataaaaatatgtccgtttttt ttgggacacactgtatgaTTGTATGATGGTTTTTCAAAATCgcttgaaaa tgatattttatgttATGCCCACGGGTTATCATTACATTCTGtttattcca atattttttgaattattagATGAATGGTCGAATTTCAACAAATATTCAGG ATTTGAAGTTTCAGACGAAAACGTTGGTTACAACTTTGCGGTAATTttgt tctatctattcataaaattaaaaacaatgcAATTTGAAACTCCATGTTGT TAAACGCGAATACAGCATGTGTGCATGGGCCCCCGTCAACACTTTTTTGC AGACCATAccatactttttttaaaagttactattttaagccataaaaact attattctccacAGTTAGATaacgttttaaggtgttttgagggtgtaaaa agtgaaaaactttctTCGACTACagtatttttccaaaatattgtcccccc CACTCAAAATGGCTTGCCGGGGCCCATGGTGTGTCATAATTCTGTTAGCC GCCTACAGTGTGCCCGAAAAAAATAAGGGttgtatttcaaaatcatttct tACTTATTACTTCGATATCCGATATCCGATTTTCTTTAGGCTGGAAGAAA TATATAAATACTGGATAGGCATCTTCGATTATTAAAACAGAAatattatc aatatttttattattcttGTAGAGTCTGATGCATTATCGAAACGATGCGT TTACAATGAACGGCAAAGATACTTTAATAGCCAAAGGTGACGAATCGTTA AAATTCGGTCAACGAATCAAATTCAGCGTTGGTGATGTTAGAGGAATCAA TCGATTTTACCAATGTCATGCATATCTTGACACACCAAATTATAATGGTT TGTTTAAAGATTATTCTGGCGTGAAAGACGAACAcaaggaaaaggaaaaa agattggaaaatgttttgaataaatTCAGGGACCGATTTTATGATCGGAA AATGAGACGTGGCTATTATTGATTGTTTTAATtggttatttttttatttt tttttgggaaatacAGTGCGTCCGAAAATAATTTATATTAAGTAAGTAAT ATTTATCGGACAGTTgtgagtacaatatgagaaatattttgcgAGTTCGG AGATTTTTCCGTGTAATATTTAAGGAAATATAAGGAatatccggaacgag tgaaatatttccatattgtacgagcaaatgtctgataactggtttatcgg tgacccaaaaagcgcagggcacttttgaagaaaagtgacgttagattgct gctaccactataatgcaacaacatctattcgtcaatttatattttgtaca tgtaaaatacaagatatattgtactctttttaaccaatcataTTGCAGAT actttttggatcgccgataagcTATACGCTACCTTACCAAGTCTTTAATT TGTTAAGACTTAAAATATTTGGATGGGTCACAGGCAAGTTCtttaatttg ttaaaaaataaagttaattTCCGAGTCACTCTTGatgcaaagattttcaa aacataaataaaattagTTGAATTACTTATTGAAGTACGACGATTCTCGT ATCTAATTTCAGCATGACTTTTTTCTGAACCCATAAGACGTGTggaaaat atttcagttaaattatttATATGTTGAATAAACATCAAACCGGTCAGACC ctaagattttaaattttatttgagGGCGCAAACTTCGGtgtaaaaatttt aattaatgaaAAGTTGcacatatatttttttgtaccCGTTAACTTGGTTT TTAGAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00012696TCONS_00012696Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00012696-proteinTCONS_00012696-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000147supercontigsc0000147:414021..420776 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
149.62 137.52 91.39 83.83 172.56 129.81 150.13 145.1 84.68 88.3 55.49 62.22 33.11 31.06 10.58 9.86 28.99 30.58 37.38 57.36 56.28 51.68 78.85 78.41 28.93 28.49 43.93 32.23 28.03 34.52