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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000216_pilon:542057..547828- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.19203.1.p1 ID=MSTRG.19203.1.p1|Name=MSTRG.19203.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5772bp|location=Sequence derived from alignment at sc0000216_pilon:542057..547828- (Clytia hemisphaerica_ch_hm2_pilon)
TTTTCTTGTTAGAACGTTTGAACCTTTATTTCTGACCAGTTTTGTACAAT
TCATAGTGTTCGATTGAATCTCCCTTTTCTGCGTCCCTTAGTTACTCTGT
TTGGAAATCCTGGTTGATCAAGAAATCTTTCTATTTATTTTAAGGAAAGT
AAGTTCAACTGGGTCGACGTATTAGGTGGAACATAAACAAAACATCGATT
AGAAAAAAAAAACAGGAGAAGTGAAGAATTCAGCAAATTCAGCAAACCTT
CTGCAAAAAAAACTGAAAACGAAACTAAATTGTTCAAGGTTGTCTGAAGT
GATGGCCAAAAGTTCATTCGTGTGATTTTAGACCAGATTCGATTTTTGTT
ATGATACATATTTGTTGATTTCATATTTTAAGTAACCGGTTCTAATCTTC
ACAACAGTACATTTTTGTCGTCGTACAAGAAAATAATGGAAATTGTAAAT
CAGAAAAGCCTGATAATTAAATCGTTCCTAAAAGACTTTGAAAAGAAATT
CCCTAATACAAATATATTGTTAACAGCAACGTTTTCGTTCACTTGATGGA
ATATCATCAGGATGTTTCACTCGTGGATGATGAAGGTTGGAACGTTCTTC
ATTGGGTTGGTATGAATGGAACAGTTCGTCATTTGGAAAAGTTTGGTCAA
CAAACAATCGAAATGTTGATCTTCACAACAGTACATTTTTGTCGTCGTAC
AAGAAAATAATGGAAATTGTATATAAAAAAAGCCTGACAATTCATTCGTT
CCTAAAGGACTTTGGGAAGAAATTCTCTAATACAAATATATTGTTGACGG
AACAAGAAAAACGGAATGGAAAATCTCACTCTTGTGGATGTTGTCGAAAC
AATACAGAGACAGAGACAGCGACAGAGACAGTGACAGATACAGAGACAGT
GACAGAGAGATAGAGACTTTTACAGATGCAAGAGAAACATGTCAAGAACT
TCCACCGATTAAATATCTGAATACAGTACAGAAAATTGAAACAAATACAC
GTGTCAAGAAATCACGTGCCAAAAAAAAGGCAACTGAGAAAAACAAAATA
ATGAGGAAATTTAATTTGTTATTTTTGTTTTCAGCCACTTCAGCGTACTA
CTTCACATCACAGGAGCAGACTTTTATAGATGCAAGAGAAACATGTCAAG
CACTTCCACCGTTCAATGGAGTGCAATTTGATCTTGTTGTTGTTGACACT
ACGTTCAGTCGGCCAAATAAACACTAGAATGTTGCGAACAAAACTTTTGG
ACAGTACATTCTCTTTACCAAACAAATGGTCATTGAAGACAATATTTCGT
TATTGTTTATTTATTAATTTATTCATTTATTTCATTATTATTTATTTATT
TATTTATTTATTTGTTTGCGATTTTGTTGTGTTGCTCTGATGGGTATGGA
GGGGCTACCCCCGAAAGCCTTTAGCATCATAGGTTTGTAATAAGAGCAAA
TAAATATGTTTTAATGTTTCTTAGCTTTTATCTGTTTTGTGCAATGCTCT
CCTGGCAATTAATCATTATAATTGGACAAAAAAATGGACTACTAACAACA
TGGCGGGCTGCTATCCAAGATGTAGCTGAGACAACGAACTTCCAATACTG
TCAATAGAAAAGAATCACTACGGGACATAATTCAGCAAACTTTCTGCAAA
AACTGAAAAAGAAACTAAACCTTTCAAGATTGTCTGAAGTGATGGCCAAA
AGTTCTATCATGTGATTTTCATTTGTTATGATACATATTTGTTATGATAC
ATATTTGTTGATTTCATATTTTAAGTAACCGGTTCTAATCTTCACAACAG
TACATTTTTGTCGTCGTACAAGAAAATAATGGAAATTGTAAATAAAAAAA
GCCTGACAATTCATTCGTTCCTAAAAGACTTTGAAAATAAATTCCCTAAT
ACAAATATATTGTTAACGGCAACGTTTTCGTTCACTTGATGGAATATTAT
CAGGATGTTTCACTCGTGGATGATGAAGGTTGGAACGTTCTTCATTGGGT
TGGTATGAATGGAACAGTTCGTCATTTGGAAAAATTTGGTCAACAAACAA
TCGAAATGTTGATCAATGGAACAGACAAATTTAAACGAACGTAAGTAAGT
ATTTTAAGTATTTAAAAAATAATGGTTACATTACGTCTTATTTACTTTAT
TATGGAAACATAATATTTTGTTCACAGCTTTTGGTGTCAATGGTGAAAAC
AACAAAAAACCTAAGTCCATGAAGGAAAACAAAGGAAGTGCCGGGTGTCC
CAGAAAAAAAGTTCCGCCCTTTGAAGTGAATTTTCTCGAGTTCTATGAAC
TTTTAAATAATGAATCTTTTTGCATTGGAAAGAGGAAGGATAAACTTAAA
TTTTGAGGGGTCATTTATTAAATTAAGTCAATTTGATCAAAAGTTATAGC
CTAAATGCTAAAACATCACTTTTCAAAAAAGTCAAAAAAAGACGAAAAAA
GAGGAGATCAAATCATCATAAAGAAAGCACTTCTGTTGCCAATTTATTTA
CGCTCAAAGTTTTTTCCATACAGTTCTTTAAGGTGTCTTTATTTTATTGT
TAATTCCTTTTCTTTTCTTTGTCTAATTTAACGAGCTCCCATGGGCATAA
TCAAGGGGCACGAGATCCAAACATTCATCAAAATCTTACCAAGAGTTTTC
AAAGCTTTTTTTGTACACATTGTTGAGAGTGAGAAGGAAAAAGCTTGTAT
CAAGTGTGTTGAGAAAAATGCCTCGCCTAACTATTCCTCAAAAAACTTGG
GTGTGTATTGAGTTTGCACGCATAAATAATGCCGCAAAAGTACTGAGACG
ATGGCCTAACCAATGGCCCAATGTTCCTCCTCCGACAAGAGAAGCCATAC
TCAAAAACTTTCGAAAATTTGGTAGAGAAGGAACTTGCCACAACCTCAAC
AAAGGTCGAAGTGGCAGAAGGCCCACTGTGATGACACAGGCGAACAAGAA
TATGGTTAGAAGATCTTTACAGCAAAATGGTCGTCGTTCATGTCGAAGGA
ACGGGGTCAACCTTACTCGATCCACTTTCAATCGAATCGTCAAGGAAATA
AAATTTCATCCTTATGTGTTGGTAAAGAAGTAAAAACTAAAAAATCAAGA
TCCAGCAAGAAGATTAACCTTTTGCAACTGGTTCAGAAATGAATAATGCA
AATTTTTTATCAAATTTGATCATTTCTGACGAGGCAACTTTCAGCATGAA
CTCTGATGTGAATACTCGTAATGTTATTTACTATTCTGAACATGGTCAAT
GGCATCCCGATGACCACTATGTGGAATTTGAGCAAGGGGCGGATCAGGTG
ATGGTTTGGATGGGCTTAACAGGAAATGGATTAGTGTTGGGTCCACATTT
TGTTCAGGGGAGGTTGGATACAAGGGAATATATGAGAATCGTGTGTTATA
ATGTCATTCAACAAGACTTTGTGAGGCTTGGGATCAATAAGGCAACGTCT
TGGTGGATTTAAGACGGAGCAACTCCCCACACAAGCAACGCTTCACTTCG
CTATCTTCGTGGTCAGTTTCCCAGAAAGGTGGTCAGCAATAGAGGAGATG
TTGAGTGGCCCCCAAGATCGCCTGATCTCACTATATGTGATTTCTTTTTA
TGGGCTTACATGAAACCGCAGATCTGGGAACAACCCCAAAATTTGCAACC
TCAGACCCTTAATCAATTGAAAGCTTCAATTAGAAATGTTGCAGCTAACC
TCGACCCTCAAATGGTTCAAAATGCTTTTGCAGGAATGATTAATCGTGTA
AATAAGTGCTTTGGAAAAAATGGAAATACATTTCCTGATGAATAAAAAAC
CTTTTGTGTCTTTGTCTTAGAATGAATTTAATCCCCTCTTTTTCGTCTTT
TTTAGACTTTTTTTGAAAAGTGATGTTTTAGCATTTAGGTCATAACTTTT
AATCAAGTTGACTTAATTTAATAAATAACCCCTCAAATTTTAAGTTTATC
CTTCCCCTTTCTAATGCAAAAAGATTCATTATCTAAAAGTTCATAGAACT
CGAGAAAATTCACTTCAAAGAGCGACTGTTGTAAGCCACTTCAGCGTATT
TCTTCACATCAGAGGAAGAGACTTTTAAAAATGCAAGAGAAACATGTCAA
GAACTTCCACCGATTAATGGAGTGCAATTTGACCTTGTTGTTGTTGACAC
CATGTTCAGTCGGCCAAATGAACACTAGAATGTTGCGAACCAAACTTTTG
GACAGTACATTCTCTTTACCAAACAAATGGTCATTGAAGACATTATTTCG
TTATTGTTTATTTATTCATTTATTTCATTATTATTCATTTATTTACTTAT
TTATTTATTTATATTTGATTTTGTTATGTTGCTCTGATGGGTATGGAGGG
GCTACCCCCGAAAGCCTTTGATATCATAGGTTTACAATAAGAGCAAATAA
ATGATTTTTAATGTTCCTTAGCTTTTATCTGTTTTGTGCAATGCTCTCCT
GGCAATTAATCATTATAATTGGACAAAAAAATGGACTACTAACAACATGG
CAAACTTCCAATACAGTCAATAGAAAAGAATCACTATGGGACATAATTCA
GCAAACTTTCTGCGAAAAACTGATAACGAAACTAAATTTTTCAAGATTGT
CTAAAGTGATGGCCAAAAGTTCTATCATGTGATTTTAGACCAGATTCGAT
TTTTGTTATGATACATATTTGTTGATTTCATATTTTAAGTAACCGGTTCT
AATCTTCACAACAGTACATTTTTGTCGTCGTACAAGAAAATAATGGAAAT
TATAAATCAGAAAAGCCTGATAATTCATTCGTTCCTAAAGGACTTTGGAA
ATAAATTCCCTAATACAAATATATTGTTAATGGCAACGTTTTCGCTCACT
TGATGGAATATCAACAGGATGTTTCACTCGTGGATGATGAAGGTTGGAAC
GTTCTTCATTAGGCTGGTATGAATGGAACAGTTCGTCATTTGGAAAAATT
TGGTCAACAAACAATCGAAATGTTGATCAATGGAACAGACAAATTTAAAC
GAACGTAAGTAAGTATTTTAAGTATCTAAAAATAATGATTACGTCTTATT
TACTTTATTATGGAAACATGATATTTTGTTCACAGCTTTTGGTGAAAACA
ACAAAAACCTAAGTCCATGAAGGAAAACAAAGGAAGTATATTCGTGGCAG
GATGGGGTGGTCAAGAGAAGAACTATCGACTGTTGTTGTTGACACTAGAG
TAAATGGACTACTAACAACATGGTGTCTTGCTATCCAAGATGTAGCTGAG
ACAACAAACTTTCAATGCAAAGAATCACTACGGGAACACTTTTACCAGGG
AAACCTTTATTAGGACATGGAAGGAAAAAAAAACTTTAAAGAGTGCAAAA
GAATATTTTTTTAAATTTTTGCCTCGTATAATTTGAAAGCTGCTTGCAAG
GAAGTCTGTTAACAGACGAAAGAGCAAACGAACATATGAACGAACCTTTC
AAGAAGCTTTTCAAAAACCAAACATCATCAACTCGTTGCGTAACGGTTGC
AGTCAAACACTTCTCAAGAGAGTCCATGAATTTTGGACGAAAAGAAATTC
AAGAAATTCAAAGAAATTTAATTTCAAAAACCAAACATCATCAACTCGTT
GCGTAACGGTTACAGTCAAACACTTCTCGTGAAAGTCCATAAATTTTGGA
TGAAAAGAAATTCACGAAATTCAAAAAAAATTTTTTCAAAAATCCAAACA
TCATCAACTCGTTGCGTAAAGGTTGCAGTCAAACACTTCTTGTGAAAGTC
AATAAATTTTGAAAGAAAAGAA Coding sequence (CDS) from alignment at sc0000216_pilon:542057..547828- >MSTRG.19203.1.p1 ID=MSTRG.19203.1.p1|Name=MSTRG.19203.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=390bp|location=Sequence derived from alignment at sc0000216_pilon:542057..547828- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGTCGAAACAATACAGAGACAGAGACAGCGACAGAGACAGTGACAG
ATACAGAGACAGTGACAGAGAGATAGAGACTTTTACAGATGCAAGAGAAA
CATGTCAAGAACTTCCACCGATTAAATATCTGAATACAGTACAGAAAATT
GAAACAAATACACGTGTCAAGAAATCACGTGCCAAAAAAAAGGCAACTGA
GAAAAACAAAATAATGAGGAAATTTAATTTGTTATTTTTGTTTTCAGCCA
CTTCAGCGTACTACTTCACATCACAGGAGCAGACTTTTATAGATGCAAGA
GAAACATGTCAAGCACTTCCACCGTTCAATGGAGTGCAATTTGATCTTGT
TGTTGTTGACACTACGTTCAGTCGGCCAAATAAACACTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000216_pilon | genome | sc0000216_pilon:542057..547828 - |
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