XLOC_006420 (gene) - C. hemisphaerica

Overview
NameXLOC_006420
Unique NameXLOC_006420
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000128:312427..315831+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006420 ID=XLOC_006420|Name=XLOC_006420|organism=Clytia hemisphaerica|type=gene|length=3405bp|location=Sequence derived from alignment at sc0000128:312427..315831+ (Clytia hemisphaerica)
GTTCGGAATGTAGCCGCTGAAGCCATGATTGAGTGTTTTAAGTCGGTAAG
TTGTTATTTTTACcttgaatattatcaaaaatattgTTCCAGAAATCATT
TGCAGCATTTTGGTATCAGGCTTGTTTGCTTTCTCGAAAAAATCACGTTT
TTATAgaccaaaattttatgttttttagcTCTAGTTGTAAAGCTTTGAAA
ATTCATTTCGTCAATTTGCTTGTCTCTTATATTTTTCACTTAGGGAGTTT
TTACTACTTTTAATCATCATATTCACTCTCAATATATAACAATTTCTATC
CCTCTCTTCTCATAGGCGaggaaaaaatataacagctGGCTTGACATATG
GAACAACTTGCCAATATTCCGTAAAGAAGTCCTTATCGTACTCTCCATTG
TGATTGGTACTGTCAATTTTGGTCTTTCCATCAATGACTTTGTACAATTT
GGTGAATTACATCGACCATGTCATTCTACGTACAGTATTACCACAGAGCT
TTTGGtaagtttattttttaatcggGTGTTGTAAGACTGTAGGTTTATTA
CACGGCCTTTTGTACAAACAATAGCCGGTTAATGACTACTGAATTTAAAG
ATAATTGACTGAATGGTCAGAACGCTTTAAGGCTTCTGAGTTTACCAGGC
CAGCCTGGTGCAAATGAATGACCTTCCACTCCCAGCGGTAGATATTACTT
CAAATTCGGAATCAATTACGTGGGCTTCGCAAGTTTTGCGagattttagt
atttttatttCCGTTTTTGGAGCTTCAAATATCTGGTGCTTCGCACTTAG
ATGGATATGATAATATTCTGATTCGCAAACCTGTATGCATACACTTCCTG
TACAAGAAAACTTATTGTTAGGGGATTAGCAGTACTAAGACttagttcat
ctaatgttttcagctcacccaaatagagactaatacgcatgcgtaattta
tcgttcttttaAACAACATGCAGTTGATTTcagtgataaacaaagaggaa
tgaatctgtaggggtggtacagtcactttcggtcggggttgcagacagcg
aaatatgtcgttctttgataggGTTAGGGTCGTTCTTTTTGAcgtgcttt
ttaatagttatgtctggaaacgttagatgaacagtctcctAAAGTACTAG
TTTTGTTTGCTTTGTGTTCTCGCGTCTAACGAATTGCGTGTTTCTCTTCT
AAATCGAGTTTGCAGTTTTAGAAGTTCCCTGATAAGCATTATGGGTAGGG
TTATAACGCAATACTGGAAAATTTATCGTTTTGAAATCTGATCTAATAAA
TTTTCAAGCAAATTCTCCTTGACAGGTATAAAAATCCAACGTTAATTAGT
GATTTGAACGCTTCTTTCTATTTCTTAGGCTTCGATTACAATTGGATTTT
ATTTTGGCTTGACTGGATTCGTATATAGCTGTATTCGGCAAAGTAAATGG
AAGTTTGTCGCTATTTTTGCTATCGGTAAGTAAAATTATTTCAACTGCCT
CATTTTCCCGCTTGTTACACCTTGTAATGTTGCTCTAAAAATTTATGCGA
AAGTTTTTGAAACAGGTTACCCCAAATTAAGAGTAACTCTCAGACGGGAA
CTTTAAACACGATACGTAGCCTAGTtaccaaaacaaaatcaaaagttata
aacCGGTTAATCTGGTATTTATTCATACATTTTGTCATTTTAGCTTGGAA
TATGTTTGTGTTGATTTTCAGAACCATTTCTGAATTCGTATACGTTGAAT
TTCGACCAGATTGAGAAGGTAGgcatttttggtaaatttttgtaATGAAC
GAACAATTACCGCTCTGTAATTCAACGTTCTGCGTTCTGCCGCACGCTTA
TACGGTGCGATAATATCAGAAGtcgccgtcaacaagaaactctcataaat
gacGCTCTACGAtttgatacgctcccttatcCGATAAAAATCCAATTCCT
GCTGAAAATGGAATTAGGGAGCTTTAAGCTTTGTGGACGTCACTCCATCG
TCAAAGATTAAGCCTCGATTAAGGGACGCTTTGATCATATTTTGCCACCT
GACCAATACAAGTATTTGACAAACTGACCCGAATTTTCCCTTTAAACCTA
ATAAATAACTAGGAAAAGTGTTCtattttgcgattttttagactttttga
CTTCTTTGGCATTCTTGCAAATGTGTGCCAAGGCCATACTCTTAGGTttt
aaataaacggggggggggttcgaataaacaggggggttggaaaattttct
agattttaataaacggggggggacctaattgccgggggtggaaattgtac
ttctaaaacccaaaaataaggtaaaaataggctaaaatcaggctatctAG
AGCAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNctttgacagctgaaaatattcttag
agattaataaacgggggggtcctaataaggtccgggggggttggaaaatt
ttcgaaaaatgaacaagcgggggggccgtttatttggaacctaagagtaa
cgcTACCGGAGGACAGGGGGCTTGACCcctcactttttttaaatgggCAA
AGTCAGTCTGAAATAGCGTGATTTCAAGGCATATTGGAGGATCAAAAACC
ATGGCCCTGTGTACGAGAATATTTTGAGTGATTTgcaggtctgtaaaata
ccaactgGTGGGTGACTTAATAAATTCTACACATTTCCACACAGACCAAT
CTATAATGTTTGCGGTGAAAAACTTTATAACCGTGCTTCAATTTTTCCAT
TTCTCTAGGTTATCTCaagatttgaaacttttttgaaatggtCCGGAATT
TTATCGTTAAAATCTGTATACAGAGTTGATTCATTGGCGCTTGTAAGACC
AATTTGACGCCATGACAATATTTTGGAATCAGCCAAAGATCATCAATGCT
GCTATTGGTTACATGAAGGTGGGCTCCCTGTCACCTAAACACAATAACAG
ACAATATAAAAGCACGCCCTGGGAAGGGATGATATAGAATGACAGAAAGA
AGATCGGGATTTCGAAAGATTATTTGgtgttttgatatgtttttaaGTTA
CTGTTGTAGTGTAGTCTACTTTATGTATTCATGAATTAAAATCCGAAAAT
ACTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00011458TCONS_00011458Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00011458-proteinTCONS_00011458-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000128supercontigsc0000128:312427..315831 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.09	0	0.25	0.31	0.38	0.07	0.26	0.26	0	0	0.48	0.44	0	0.1	0	0	0	0	0	0	0	0.31	0	0	0	0.07