MSTRG.14898.1.p1 (mRNA) -

Overview
NameMSTRG.14898.1.p1
Unique NameMSTRG.14898.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000127_pilon:557126..558852-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.14898.1.p1 ID=MSTRG.14898.1.p1|Name=MSTRG.14898.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1727bp|location=Sequence derived from alignment at sc0000127_pilon:557126..558852- (Clytia hemisphaerica_ch_hm2_pilon)
CATCACATTGTTTTCATCGCAGAAAAATATAACTTTCAAGATGTCATCAG
AGGAGGCAATGAACGCTGCATTAAATGCACTTGCAGATTTACAAAAAAAA
GTAAGCTCAGATATTATTTTAAGGCCCTAACCAACGACTTGCAAATTAAC
TTACGGGTTGATGCCGTAGACTTGACTTTTACAGGAACTTTAAATATCCA
AGAAAGGCACCCTAAAGAGTGGAACATACCCCCTGGCTCCAATATCTTTA
GATAATTTACTACTTCAATCCTTTATAAATTTAAGTATTTTAGACAAGGG
AACAGACACTCCAGGAACTGGGGTCTGAGTATGACGGTATAGATTTCGAT
TTTTTACAGCTTAAAAAACAGAAGTTACATCATAGGTCAGATTTTTTCCT
AAGAGAATATGAAAGTTCCATTGGTCTCTGTCTCGCTTTGACCTTTGAAG
TCTTTTGAGCAGTGATTTTTTTGGCCTTTCAATTTAACATATTATTTTCA
ACAGGAGTTACTAAGCCTGGAAAAAGCGTGCGAGGGGTTGGCCAATATTA
GAACATTATCCTACGGTGTCGAATTTTGTTTAAATGTAGTGAGATTTTGA
TTTTATTTAACTTTAGATGAACAGTCAGTCATCTCATTCAGAGAATATCT
CCAAATCTATCGAGAGTCTGCAAAAAGATTTGAAAGATTCGGAGAAGAAA
GCCAAGGGAAATGCTTACATCAACGGTGCAAACGGGGTTGTCCAAGTCGC
TCAAAGTGTTGTCAACAACTTAGACAAGTTCACCTCTGGTGATGCTTTGG
GTATAGCATCAGGCGCCCTCGCGATCATTGGAACGATTGGAGGTGTCGTT
GGTGGACCCGCTGGTCCGCTCATTGCTGGTGTGTGTTGCTTAGTTGCATC
CATTCTACCCTTATTTGGTGGCAGCAGTGGACCATCCATGGGAGAAGTCT
TGGAAAAAGTCATCAAAGAAGCATTAGCAGACTTTAAAGATGAAGAAATC
TACGGACAAGTCCTTGGATCTTTAAGGTTGATGAAACCTCAAATGGTAGA
ACTTAATGGAATCGCTGAAAAGAATGGTGGGCTTTTGAAAGAAAGTGAAA
AAAGCTTTTTGACAACATTGGATTTCTCTACGGCTGGTGTAGAGATTCTT
GGAGCATTGCAAGCACAATTGGATAGGCACAAGGATACCACTAACGAGAC
AGAGGCTACCCGGTTGGCAACCTATTGCTACTACTATTCCATGATATCAA
CCCAAAAACGATTAATCTTAACACTTCAATGTGCTCTTCTTCGCCGTAAT
GATATGGAGGCTATCTATCATGGGGTAAAAAGTTACTTGGACAACGCCTT
GCTAGAAGAAGATAAGAAAACTTTCAAGTTTTTGATAGATTTACCAAACA
ACGGAAAATGGTGGCTTTTATACCGTTATATACACAGAGTTGGAAGCACC
ACAGCGTTCTATCATCTCAAACTTTCTAAAAGTTATCGGATGTGAGATCA
AAGGGCAACTTTGTTTTCTCTATAATGAATACATGGAGCAATATATGTTT
ACACCAACAAATGGGAGCGCAGAATTTGCATGGGATAAGCTCAGACGTAA
CATCTTTACCGCACCAGAGGAGAGGTCATCCTTCAGTTGCAAGCTTTACC
GACTGATAGGACCTCGTGACAACTGTCAAATACTTTCTGTTCACTATAGT
GAGTATTTGTATGCACCTGATTACGCC

Coding sequence (CDS) from alignment at sc0000127_pilon:557126..558852-

>MSTRG.14898.1.p1 ID=MSTRG.14898.1.p1|Name=MSTRG.14898.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1878bp|location=Sequence derived from alignment at sc0000127_pilon:557126..558852- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACAGTCAGTCATCTCATTCAGAGAATATCTCCAAATCTATCGAGAG
TCTGCAAAAAGATTTGAAAGATTCGGAGAAGAAAGCCAAGGGAAATGCTT
ACATCAACGGTGCAAACGGGGTTGTCCAAGTCGCTCAAAGTGTTGTCAAC
AACTTAGACAAGTTCACCTCTGGTGATGCTTTGGGTATAGCATCAGGCGC
CCTCGCGATCATTGGAACGATTGGAGGTGTCGTTGGTGGACCCGCTGGTC
CGCTCATTGCTGGTGTGTGTTGCTTAGTTGCATCCATTCTACCCTTATTT
GGTGGCAGCAGTGGACCATCCATGGGAGAAGTCTTGGAAAAAGTCATCAA
AGAAGCATTAGCAGACTTTAAAGATGAAGAAATCTACGGACAAGTCCTTG
GATCTTTAAGGTTGATGAAACCTCAAATGGTAGAACTTAATGGAATCGCT
GAAAAGAATGGTGGGCTTTTGAAAGAAAGTGAAAAAAGCTTTTTGACAAC
ATTGGATTTCTCTACGGCTGGTGTAGAGATTCTTGGAGCATTGCAAGCAC
AATTGGATAGGCACAAGGATACCACTAACGAGACAGAGGCTACCCGGTTG
GCAACCTATTGCTACTACTATTCCATGATATCAACCCAAAAACGATTAAT
CTTAACACTTCAATGTGCTCTTCTTCGCCGTAATGATATGGAGGCTATCT
ATCATGGGGTAAAAAGTTACTTGGACAACGCCTTGCTAGAAGAAGATAAG
AAAACTTTCAAGTTTTTGATAGATTTACCAAACAACGGAAAATGGTGGCT
TTTATACCGTTATATACACAGAGTTGGAAGCACCACAGCGTTCTATCATC
TCAAACTTTCTAAAAGTTATCGGATGTGAATGTCATCAGAGGAGGCAATG
AACGCTGCATTAAATGCACTTGCAGATTTACAAAAAAAAATGAACAGTCA
GTCATCTCATTCAGAGAATATCTCCAAATCTATCGAGAGTCTGCAAAAAG
ATTTGAAAGATTCGGAGAAGAAAGCCAAGGGAAATGCTTACATCAACGGT
GCAAACGGGGTTGTCCAAGTCGCTCAAAGTGTTGTCAACAACTTAGACAA
GTTCACCTCTGGTGATGCTTTGGGTATAGCATCAGGCGCCCTCGCGATCA
TTGGAACGATTGGAGGTGTCGTTGGTGGACCCGCTGGTCCGCTCATTGCT
GGTGTGTGTTGCTTAGTTGCATCCATTCTACCCTTATTTGGTGGCAGCAG
TGGACCATCCATGGGAGAAGTCTTGGAAAAAGTCATCAAAGAAGCATTAG
CAGACTTTAAAGATGAAGAAATCTACGGACAAGTCCTTGGATCTTTAAGG
TTGATGAAACCTCAAATGGTAGAACTTAATGGAATCGCTGAAAAGAATGG
TGGGCTTTTGAAAGAAAGTGAAAAAAGCTTTTTGACAACATTGGATTTCT
CTACGGCTGGTGTAGAGATTCTTGGAGCATTGCAAGCACAATTGGATAGG
CACAAGGATACCACTAACGAGACAGAGGCTACCCGGTTGGCAACCTATTG
CTACTACTATTCCATGATATCAACCCAAAAACGATTAATCTTAACACTTC
AATGTGCTCTTCTTCGCCGTAATGATATGGAGGCTATCTATCATGGGGTA
AAAAGTTACTTGGACAACGCCTTGCTAGAAGAAGATAAGAAAACTTTCAA
GTTTTTGATAGATTTACCAAACAACGGAAAATGGTGGCTTTTATACCGTT
ATATACACAGAGTTGGAAGCACCACAGCGTTCTATCATCTCAAACTTTCT
AAAAGTTATCGGATGTGAATGTCATCAGAGGAGGCAATGAACGCTGCATT
AAATGCACTTGCAGATTTACAAAAAAAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.14898MSTRG.14898Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14898.1.p1.exon2MSTRG.14898.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14898.1.p1.exon1MSTRG.14898.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14898.1.p1MSTRG.14898.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000127_pilongenomesc0000127_pilon:557126..558852 -