MSTRG.17621.2.p1 (mRNA) -

Overview
NameMSTRG.17621.2.p1
Unique NameMSTRG.17621.2.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000179_pilon:650060..651131+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.17621.2.p1 ID=MSTRG.17621.2.p1|Name=MSTRG.17621.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1072bp|location=Sequence derived from alignment at sc0000179_pilon:650060..651131+ (Clytia hemisphaerica_ch_hm2_pilon)
GTCTTGTCAACGTTTTATTGACTCCAAAGAAGGATACGAACCAATGCGTA
AGAAACCCAGGAGGTCGGAACCTTCAGAGATGAACAACGACCCTTTATCA
CTCAAAACTATTGCTACCATGCCAACCGACGACCCTGAACAACAGCAAAC
ATGGCGGAAATGCAGTATTTGTTTAAACGAAACTTTCAATGAGGAGCTAC
GGATACACGCAACCTGTGGAGGGTTGATTTGTCAAGCGTGTCTTGTTATC
ATGACTGAATACCatgaaaaccaaaatttccaatgtCCTGTAAGCCATTT
TGTTTACGAAATTTAGAATATCCATGCCgtcttttgtttcaattttataT
CAGCGACTCAGTGAGAACCCTTTTGGCCAGTTAGGAACTTAAGAAGTTGC
GAACAAGGGGAGGGAAATCCAGTTGATTCGAGAGGTTTCCATTCCAAACT
CTATTAAGTGTCTACAACTCAAATATCAAGTATCGATTCACAAAATTTGA
TATCATGATCAGTAGGAATGAGAGCTTAgtgtaatttatgaaaacgATTT
GGTATATCTTTTCAGTGATCCCGCATTTGAATGTTCTGTGGCTTCTGCAA
AGAAATGTGTTTATTTCAGACCCTTTGAATGTTATTCTAAACaatatctt
ttattttcttAGACATGCTCAGTATTAATTAACGGTCAGGACTATACACG
AATTTCAGAGAATGAAGAAGATACGCGGCCACGTTCTAGGTGAGAATTAC
GCAAATAATTGACCAATTAACCCTAATGTTTTATATCCTGAATACTCTTA
GTTGTTATTGTAGTTGTACATTTTCTAAAACATGTTTCCCATTTTGCCAA
TAGGAAAGTGATAGTTCCCGTTTTATTTCGATACAAACAAACACTTGATG
AAAAAGCTGACAAGATTAAGGTAAACTTTTCCGTCAACAGATAAGTCCTT
TCGTTAACCCAGATGGCCTGgtcacaatatttttatagctgGTTACGATT
TCGTATTTTTCCAGCTAAACATGAAGCTGTTGTATTGGTTAGGGACGCAA
GAAACAAGTTTTCGGCCGATAG

Coding sequence (CDS) from alignment at sc0000179_pilon:650060..651131+

>MSTRG.17621.2.p1 ID=MSTRG.17621.2.p1|Name=MSTRG.17621.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=666bp|location=Sequence derived from alignment at sc0000179_pilon:650060..651131+ (Clytia hemisphaerica_ch_hm2_pilon)
TCTTGTCAACGTTTTATTGACTCCAAAGAAGGATACGAACCAATGCGTAA
GAAACCCAGGAGGTCGGAACCTTCAGAGATGAACAACGACCCTTTATCAC
TCAAAACTATTGCTACCATGCCAACCGACGACCCTGAACAACAGCAAACA
TGGCGGAAATGCAGTATTTGTTTAAACGAAACTTTCAATGAGGAGCTACG
GATACACGCAACCTGTGGAGGGTTGATTTGTCAAGCGTGTCTTGTTATCA
TGACTGAATACCatgaaaaccaaaatttccaatgtCCTGAAAGTGATAGT
TCCCGTTTTATTTCGATACAAACAAACACTTGATCTTGTCAACGTTTTAT
TGACTCCAAAGAAGGATACGAACCAATGCGTAAGAAACCCAGGAGGTCGG
AACCTTCAGAGATGAACAACGACCCTTTATCACTCAAAACTATTGCTACC
ATGCCAACCGACGACCCTGAACAACAGCAAACATGGCGGAAATGCAGTAT
TTGTTTAAACGAAACTTTCAATGAGGAGCTACGGATACACGCAACCTGTG
GAGGGTTGATTTGTCAAGCGTGTCTTGTTATCATGACTGAATACCatgaa
aaccaaaatttccaatgtCCTGAAAGTGATAGTTCCCGTTTTATTTCGAT
ACAAACAAACACTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.17621MSTRG.17621Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.17621.2.p1.exon1MSTRG.17621.2.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.17621.2.p1.exon2MSTRG.17621.2.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.17621.2.p1MSTRG.17621.2.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000179_pilongenomesc0000179_pilon:650060..651131 +