MSTRG.1355.1.p1 (mRNA) -

Overview
NameMSTRG.1355.1.p1
Unique NameMSTRG.1355.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000006_pilon:2382752..2384613+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.1355.1.p1 ID=MSTRG.1355.1.p1|Name=MSTRG.1355.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1862bp|location=Sequence derived from alignment at sc0000006_pilon:2382752..2384613+ (Clytia hemisphaerica_ch_hm2_pilon)
CAGAGAAATCAATCCCTGAAGTGCAGAGTTTCCACATCACCATTCGACGA TGTTTGGCGAATCACAATTTCCCTCAATTATGTACAGATGCAAAGTCTGA ACGAGTTGGACTTCTCAACATTCTCAAGAAGAGCTGTAAGGTGCTCAATG GTAAGTAAAACGGTGTAATCGTTTAAGCTCGTGTGGtgtataaagaactt tttataaaGTCAGAAATCGATTCATGTTCAAGTCACGGACACGAGTCTTC GTTAATCAGGTTATGCTGTGTTTTCTTCACTAAAAAAGTAAGATTAACCC ATCAGAGCCATAGGGTTTACCAATACatctcattttttcaaaaacaatta ttttattGGCTTAGTGATTTAGTGTTGCCTACACCCCCGCCTACACCTAG GCtgtacaaaactttttggaaggTTTGCCACACCAGTGCTCCAAATTGCC TGAAGCAGCTTGAAGAACAGTTTTAAATAATATCTATAACATGGTAAGGA GTGGTCATCGTTCTTGACTTCCGTGctggaggtcagggttcgattcccac tcggtgctgcaattcacttggcaagtgaatgtaccttggcccgtgtcaac ccataccatgtgaggggaatagggtaccatcactctgataccagtatggg gagatatgctggacattgaatgtggtgtggtgatggtactcatatgttca gtacctgaaagaacgcaaggttctcccgtactgttcgagtatcatcatcg atacagcacgattctgatgtgtcgcgagcacagagtacaatgtctggtaa gcgctgtgatttccctatctaggggtaggaaactatcccgggatagggcc cggtccgatgatatcggagggttAGATTCTCTCTTCTCTCTATAACAtgg taaaattaatttttgttttgcgGAACTTCAGATCGTTTCAAGGGACAATC TTCCCCGTTGACGTTCCACGATGAGCATCTTGCAGACTTGTTGAGGAAAG GCGTCATCAAACCTGAAGAGCAGAGTGAAGAAACAGCTTACTCAACAACT TATAAAGGACAGGGCGGTCGCGTTCTTGTGTTGTTGAATTATATCGAACA TTATCGCGTCATTGTGTCTACAAGAAAAGGCGATCTGAAGGTAAGTATTA TTTATGATTGttgtgtacatgttttttttataaacaagtgtatgcccctt ggtcaggctcgtgtatgcttaagttatcaaagcatccaggcatagcttat gcttattatatgcttatgaatcatacttataattcaccccgagccaagtt ttagcaagattttaaaaaatctttaaaaatttgctcagatttgggagcag tggtagccgtggaatgtcttttatttacttgacctctaccaaaccttttt aaactgataaaaaatgacacctattcatatgcttataagcgttatgctta tgaaaaaacatgtattacaCAAAATATAGAGTGCTAGACTCTTTACCTAG TCCAAGCAAGGGTTTCAAAAAGTAGAAGTAGCAGAAATATTGTccgataa aatatttttaaaaaagacaCCATTTCCCGAGTTTGAGATTTGTTCTGTAG GCTATGTTAACGAATACTACCTACTCCTCTAACCATTACAAGAAATATGA ATAGAGCAAATGCAGCCAGTTATTTTCCAAAgaattcaaatatttctatC ATTTCCAATTCTTAGTGATCATTTTCAGAAGCACAAAGCATTGTGTGTAG CATTGAGCAAGTGTTGACTCCCAAAAACCTTTCATACGCTTTACACAAAA AGCTAGGCTACGTCAACCCTACGTCTATTGGACATGCTTTCGATTGCCAC GTGGAAGTCACC

Coding sequence (CDS) from alignment at sc0000006_pilon:2382752..2384613+

>MSTRG.1355.1.p1 ID=MSTRG.1355.1.p1|Name=MSTRG.1355.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1080bp|location=Sequence derived from alignment at sc0000006_pilon:2382752..2384613+ (Clytia hemisphaerica_ch_hm2_pilon)
GAGAAATCAATCCCTGAAGTGCAGAGTTTCCACATCACCATTCGACGATG
TTTGGCGAATCACAATTTCCCTCAATTATGTACAGATGCAAAGTCTGAAC
GAGTTGGACTTCTCAACATTCTCAAGAAGAGCTGTAAGGTGCTCAATGAT
CGTTTCAAGGGACAATCTTCCCCGTTGACGTTCCACGATGAGCATCTTGC
AGACTTGTTGAGGAAAGGCGTCATCAAACCTGAAGAGCAGAGTGAAGAAA
CAGCTTACTCAACAACTTATAAAGGACAGGGCGGTCGCGTTCTTGTGTTG
TTGAATTATATCGAACATTATCGCGTCATTGTGTCTACAAGAAAAGGCGA
TCTGAAGTGAGAGAAATCAATCCCTGAAGTGCAGAGTTTCCACATCACCA
TTCGACGATGTTTGGCGAATCACAATTTCCCTCAATTATGTACAGATGCA
AAGTCTGAACGAGTTGGACTTCTCAACATTCTCAAGAAGAGCTGTAAGGT
GCTCAATGATCGTTTCAAGGGACAATCTTCCCCGTTGACGTTCCACGATG
AGCATCTTGCAGACTTGTTGAGGAAAGGCGTCATCAAACCTGAAGAGCAG
AGTGAAGAAACAGCTTACTCAACAACTTATAAAGGACAGGGCGGTCGCGT
TCTTGTGTTGTTGAATTATATCGAACATTATCGCGTCATTGTGTCTACAA
GAAAAGGCGATCTGAAGTGAGAGAAATCAATCCCTGAAGTGCAGAGTTTC
CACATCACCATTCGACGATGTTTGGCGAATCACAATTTCCCTCAATTATG
TACAGATGCAAAGTCTGAACGAGTTGGACTTCTCAACATTCTCAAGAAGA
GCTGTAAGGTGCTCAATGATCGTTTCAAGGGACAATCTTCCCCGTTGACG
TTCCACGATGAGCATCTTGCAGACTTGTTGAGGAAAGGCGTCATCAAACC
TGAAGAGCAGAGTGAAGAAACAGCTTACTCAACAACTTATAAAGGACAGG
GCGGTCGCGTTCTTGTGTTGTTGAATTATATCGAACATTATCGCGTCATT
GTGTCTACAAGAAAAGGCGATCTGAAGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.1355MSTRG.1355Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.1355.1.p1.exon1MSTRG.1355.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.1355.1.p1.exon2MSTRG.1355.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.1355.1.p1.exon3MSTRG.1355.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.1355.1.p1MSTRG.1355.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000006_pilongenomesc0000006_pilon:2382752..2384613 +