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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000109_pilon:1123901..1126071- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13662.1.p1 ID=MSTRG.13662.1.p1|Name=MSTRG.13662.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2171bp|location=Sequence derived from alignment at sc0000109_pilon:1123901..1126071- (Clytia hemisphaerica_ch_hm2_pilon)
AAACTGTTTTATTGCATAGCATATCTAAAAATAAATTTCGCAGAGGCGAG
ATTACCAATCGAATCTTTTTGCACTGCGAGCAACGTTTTGCACACAAGGT
CAGCATGCTTGACCATCTGTAGTCTAATGACATCATAAAACCCATCTACG
TCACTGGTTCTTATATTCTTGAGATATAATCTCCGCGCGTTATCTCATTA
ACAATTTTGGTTTTTGACAAGTAGAAAAGCCTTTCCCTCCTTGGTTTATA
ATGTTCTGTTATCAAAAAGAAAGAAAATTTTAAAAACCGCAAAAGAAACA
AAGGATAAAGTAACAATAAGATGTCTGTATAAATATGAGCTCCCAGCGAT
GAAAGCTCCAATCATTTAGTGGTCTGTTAGTTGCTTACATAAGACGCATA
CTAACATGGGGCAGATAACAGAGACAAGAATTACTCCACAGCTGACTTAT
CAAGTCCAGGCATTTTTCCGTGCAGCTCTTAACATGAATGATACTCAGAC
AGTGAGAAAATTGTTAAAACATCAAAGAGAGGCTATCGATATTGAATTAA
CCAATCAGGAAGGAGTATTACCAATCCATTTGTGTGCGATTGAAGGAAAT
AAACCAATGATATCTATTCTTCTACGCGCGGGTGCTGATATTGATGCAAT
CGATCGCCGCGGATGGACATGTTTACACGCTGCTGTTCACACAGGTAACC
TTGAACTATGTCAATATTTATTGCGTAAAGGAGCTGATCCGTTGGTTTAT
TCAACAAAACAGGAACTGCCTGTTGACTTATCTAATTATTCTGTGATTAC
CTATTTATTGGTTGAAGTTATGCAGCAGAAAGGTCAGATTGGATTAGCGC
GTTTTCATTTATCGCGAGCTGTAGCGCAACAAAAGTACGAGGTTGCACAA
CAACAACAAGAGGAGCAGAAAAATGAAGTTTTCAAGACAAATCGAAGATA
TTCTCAACCAGCAGTTTATCGACAACATACATCACAACAATCCAGTTCAA
TTTTAAAGCGACGACCGAGTCAAATATCGGAAACTGTATCGGGAAATGAT
GAAACCCGATGTTCGTGGTCGTCAACCGTTTCGGATGAATCGGAAACAGG
AAGTGTTCGATCATCAAGTTCATCATCATCAACAAGCAGTGGACTTTCTG
TTCAATTCCCAACAAATACTTTATTTCTTAACTATGTCCACGAAAATGAG
CATGAACTTCTTGATCAGTTATTGAATGAACATAAAGTTGGTATTATCAA
CAAATTAGATCGTAAAGGTCTGAGTTCTATTCATTGGGCTGCTATGCATG
GATTTGACGAATGTATCCGTGTTTTGGTGAAACATGGTGCTAACGTTGAT
ATTGAGGACCCGAATGGGTGGACCGCCCTTCACGCCGCCGTTATTACGGA
AAAAACGGAATGTGTACGTCAATTACTGAAATGTGACTCCCGCATATACG
CCGTAACCAATAGTGGTGAGACTGTTTTCGACATGACGAACAATCAAGAA
ATCAAAAGCCTATTGGAAGGGCATGTTCATTCGAACCTCAAGATGAAACT
GAAAAACAGCACGCTTTAAACTCATACTAACTTTGGTTTTTTATCATTTA
AAATTTGATATTGGTTTTCTACCATTTATAATATTTTTGTTTGTATATTC
TGTAAATATAGTAGAAGTCTTATTTTTTACTGCTTAATAATATTTTAATA
TCTATAACTGTTCTTTTTTAAGATTTCGAAACTCTTTACAAAGCAGACAG
TTATTAAAAAGATTTTTAAAATTACGTAAGATTTTGGATAAATCTCGTAA
CCTTTGAGGATTTAAAGAATTTTTGTCACTTAACTTTTTGAAATTTAGTT
CATTCTTATTATTTGCTAAATTATTGATTGAATTTACTTTATTGATTTAT
TTGTTAGGAAATTTTTTATCTAGTTATTTTATTTGCTGGTCAAATAGAAC
TAGCAAGTTAGAAAACTATCCTTGTGCTGTTTTTTTTTAAATAATTTTTT
TTTTCGTTTTACGAAAAATCAAAAATGAAACACTTTAAAAATATTGCCAT
TTCATATTAATTTCAACCTTTTACTAAAACTTCAAAGGTTTTATTTTTAT
AGAAGTGTTCCCGTTTCATATCAGACACATATTTCATATCAGGACGGTGT
TTCCCTATTGGTCAATTCAAT Coding sequence (CDS) from alignment at sc0000109_pilon:1123901..1126071- >MSTRG.13662.1.p1 ID=MSTRG.13662.1.p1|Name=MSTRG.13662.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1164bp|location=Sequence derived from alignment at sc0000109_pilon:1123901..1126071- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGGCAGATAACAGAGACAAGAATTACTCCACAGCTGACTTATCAAGT
CCAGGCATTTTTCCGTGCAGCTCTTAACATGAATGATACTCAGACAGTGA
GAAAATTGTTAAAACATCAAAGAGAGGCTATCGATATTGAATTAACCAAT
CAGGAAGGAGTATTACCAATCCATTTGTGTGCGATTGAAGGAAATAAACC
AATGATATCTATTCTTCTACGCGCGGGTGCTGATATTGATGCAATCGATC
GCCGCGGATGGACATGTTTACACGCTGCTGTTCACACAGGTAACCTTGAA
CTATGTCAATATTTATTGCGTAAAGGAGCTGATCCGTTGGTTTATTCAAC
AAAACAGGAACTGCCTGTTGACTTATCTAATTATTCTGTGATTACCTATT
TATTGGTTGAAGTTATGCAGCAGAAAGGTCAGATTGGATTAGCGCGTTTT
CATTTATCGCGAGCTGTAGCGCAACAAAAGTACGAGGTTGCACAACAACA
ACAAGAGGAGCAGAAAAATGAAGTTTTCAAGACAAATCGAAGATATTCTC
AACCAGCAGTTTATCGACAACATACATCACAACAATCCAGTTCAATTTTA
AAGCGACGACCGAGTCAAATATCGGAAACTGTATCGGGAAATGATGAAAC
CCGATGTTCGTGGTCGTCAACCGTTTCGGATGAATCGGAAACAGGAAGTG
TTCGATCATCAAGTTCATCATCATCAACAAGCAGTGGACTTTCTGTTCAA
TTCCCAACAAATACTTTATTTCTTAACTATGTCCACGAAAATGAGCATGA
ACTTCTTGATCAGTTATTGAATGAACATAAAGTTGGTATTATCAACAAAT
TAGATCGTAAAGGTCTGAGTTCTATTCATTGGGCTGCTATGCATGGATTT
GACGAATGTATCCGTGTTTTGGTGAAACATGGTGCTAACGTTGATATTGA
GGACCCGAATGGGTGGACCGCCCTTCACGCCGCCGTTATTACGGAAAAAA
CGGAATGTGTACGTCAATTACTGAAATGTGACTCCCGCATATACGCCGTA
ACCAATAGTGGTGAGACTGTTTTCGACATGACGAACAATCAAGAAATCAA
AAGCCTATTGGAAGGGCATGTTCATTCGAACCTCAAGATGAAACTGAAAA
ACAGCACGCTTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000109_pilon | genome | sc0000109_pilon:1123901..1126071 - |
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