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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000007_pilon:933283..936499- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.1498.3.p1 ID=MSTRG.1498.3.p1|Name=MSTRG.1498.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3217bp|location=Sequence derived from alignment at sc0000007_pilon:933283..936499- (Clytia hemisphaerica_ch_hm2_pilon)
ATATATCGCATATTGTTAATCAAAATAAATATTGATTTCTCGCAGTTTTC
ATGTAGCGACATGAATCAAGTGAGCGAGGGAAATGGTATAAGAGTGAAAG
CAGAGAGTAGATGTTTGGCTAAGAAGAGGTGGAGAGGTGTGCTGTTGAAG
GAAAGAAAAGTGGTCAACAACACAAATAGACGCAATGCAACAAACGCAAC
CAGGTCCGATTTATTTTATGAGATCCACGCAAGCAGAGAACACCCCTGTG
TCAATGACTCTGTAGAATTCCTCTTACGGGGAAAAATGGCTGAAATACTA
TCTCCGGCGAGAATATACCAATACATAAGTTTATTTCCAATCACCTTATG
GTATTAAGCTCCTTCATTCTATTTCTCATTGGGTCACTGAGACAGGGGTG
TCAGACATGCTTGTGCTCCGATTATCTACATTACATGTTTTTTTTATAAG
CATATCGCTTATAAGCATATGAAGGCTCAGATTTGCAGAATTCCTAAGCA
TAACATGAGCATATATGTCAGCCTAAAATATTTTTCAAGTGATCATTTTT
ATCTGTTTTTGTTTCCTTTTTATCTGGTTTGGTAGAGGTCAAGTAAAAAA
TAAGACATTCCACGGCTAGCTACATTCCACTGCTCCTAAAATCTGAACAA
ATTTTTTACAAAAATTCTGAAATTTCATTAAAAAACTTGGCTCGGGGTGA
ATCATAAGCATAATTCTTAAGCATATAATAAGCATAAACTATGCCTGGAT
GCTTAAGCATACACGAGCCTGACCAAGGGGCATACACTTGCTTATAAAAA
AAACATGTAATAAAATTGATTTGTACTTGAAAGTACTAATTTGTGATCAA
TAAAAGGGGCTCAGACCTTTGACACAAACTTCAATCACGAATAAAGCATC
TCTTAAAAATCTGATCTGCGATGATAAAACTGAATGAGATGGCTAACTTT
CATCAAATCTCTAGATACTTCTCATAATTTTACGTATAAACCAGATAGCT
CCGAATATAAAGGTCTGGGCCCTTTTGACCTACCTACCTTTATTTCTTTC
TTGTTATAAATCTTACTCTTCCCTTTTTCAGCAGCAAACGGAAATTCGAC
ACAAGTTGAAATCACACACCGGACAACCTGTCATGCTGCAAGGGTTTACT
TCAAGTTTACCAACTGTAAAGTACCCTTTGAATTTTACGCCTTACTCAGG
CATATTCTCTTGAATATCACACAGGTGATGGTTTCAGAGAAACTTCAGTC
AGATTTTAGTCAGTTTAGAAGACCAGCTTTTATCACAGACTCCAAGGTCT
GGATAATAAGCTCTTGTAAATTTATTGAAGTGAATAGATATTGTTTTTCC
AGATAAAAAGCGTTCACCCGTTGTCAAATCTACTGTCAACTGCCTTACAC
TTATTATTTTGAACGAAAATACTTAACTCATTTCCAAATAGAGATGTTGA
CTTTTTTTAATACCTTTTTTTCTGGAAAAGGAATATGTCCACCACCCATT
TATGTTGTGTTATCCGTATAATGAGTATATCATTAATCCTTTAGAAATCT
GTACAATCTATGGTCAACACCATGAGGAGATTGGCAGGCAATTTCATCCA
GTAGATAATTGCAATTATTTTTTGGGCGATTATGAAGATGCACTGAAAAA
TGAATTTCCAGTTGGGATATTTGCTGCGCAAAATGAACGGAGTGATGAAG
GTATGGTAATGAATTTTAATATTCTTGTGAGGAATCCACTGATACATACT
CTCGGGTACCTAATAGCCGGGGGGGTTGGAAAAAATCTCAAAACTTAATA
AGCGGGGGGGTTGGAATAAAAATGTCCTGAGTGGAAAATTTTTGAAAAGG
AGGCTAATACAGCTGAATTAGGACAAAAGAGGGAACTTTCAAGAACATTT
TCCCAAAAATTAATAAGCGGGGGGGGGTTGGAATAAGAATGTCCTGGGTG
GAAAATTTTCGAAAAATTAATTAGCGGGGGGGACGGCTATTAGGTACCCG
AGAGTACATATACTGTAAAAGAAAGATGAAATTCTGCCAAAATCCTATCT
TTTGCAACAACCTTAGTAAATTTCAATACAATCTTATAAATACCAGACTA
TTTACTATTTACTAGTCGGAGTGTTGTCTATTGTTTAGATATCAAGTTTG
TTCAAGGAATAAAGCAAAGACTGATCGCCGATTGTGACGAGATCTTTGAA
AGAGAAAATTCAACAAATTTGCAAGCACTGAGCCACGATTCAAGTAATCA
GGAACTAATTGGCTTCACTGAACTTGTAAATTCAGGCGACAAATGGTTAT
GTAGTGATCAAGAGTCTTCAACTTTTAGCTCGTCAACTTTTGAAGATATT
CTCGATGAATGCTCGGATTTGTTTTGTTACGACGTACCTGTTGTGAGACA
GACCTTCAATAGCGAACAAGAAGGTACTCCCTCTAATAATCAACCCATGG
ATCCAGACTTGAACCCAGTCATTGCATCGACCAGTACATCAATTGAAATA
CAAGATGTCAGTGGGATTTTGAATAGTATACATCCAAATCTTTTGTTTGA
CTTTGCTTCAAAATCGAACAGTGCTTCTTCTGAAGACTTTAAGTGTTCAA
AAGATGAAATGTTGAAAACTAGAGACAAAAAGATCTTTAGAAGAAAGCAG
AATAACAAAGCATCGAGGGAATCTCGACTGCGCAAAAAAGAAGAATTTCA
ACGACTTTTAGAAGAGCAACATTTGAAAGAAAAACGAAAAAAGGACTTAG
AGAATGAAGTCGCTCATCTACAAGGCGGAATCGAGGAGCTTTACGCATCG
CAAGAAAGAACTTTAGAAACTGCAATTCAGGGAAATCCAAATGTTTCTCT
ACCTTTGTTTCTTGAACAATTATTGCAACTTATTCGTCAAAGTGCCATCG
AGAAAAACTCGACGGGTGAGGTTTACTCTAAGACAATCGAGAACGTTATT
AAAATTTATCAAAGAATAATGGAAAGAAATTTTGGTAAGGAGGAAAAAGT
GATGGTTCGTGAATGGCTTCAATCTCACTTGGTCAGTACAAACAATAGTT
TTTGAAAACATAATTTTGATTTTCCGTTTAGAGAAGACAGCCAAACATTA
TTTTCATAAGATTCTTCTATGCAAAGTCATAAATCCCAAAAAACTGAATG
ATTCTTTAGAAATCTCTTGGAATTTTTTAAAGATACATATACGGGTTTTC
AAGTTTTCAATCAAAAC Coding sequence (CDS) from alignment at sc0000007_pilon:933283..936499- >MSTRG.1498.3.p1 ID=MSTRG.1498.3.p1|Name=MSTRG.1498.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2232bp|location=Sequence derived from alignment at sc0000007_pilon:933283..936499- (Clytia hemisphaerica_ch_hm2_pilon)
ATATCAAGTTTGTTCAAGGAATAAAGCAAAGACTGATCGCCGATTGTGAC
GAGATCTTTGAAAGAGAAAATTCAACAAATTTGCAAGCACTGAGCCACGA
TTCAAGTAATCAGGAACTAATTGGCTTCACTGAACTTGTAAATTCAGGCG
ACAAATGGTTATGTAGTGATCAAGAGTCTTCAACTTTTAGCTCGTCAACT
TTTGAAGATATTCTCGATGAATGCTCGGATTTGTTTTGTTACGACGTACC
TGTTGTGAGACAGACCTTCAATAGCGAACAAGAAGGTACTCCCTCTAATA
ATCAACCCATGGATCCAGACTTGAACCCAGTCATTGCATCGACCAGTACA
TCAATTGAAATACAAGATGTCAGTGGGATTTTGAATAGTATACATCCAAA
TCTTTTGTTTGACTTTGCTTCAAAATCGAACAGTGCTTCTTCTGAAGACT
TTAAGTGTTCAAAAGATGAAATGTTGAAAACTAGAGACAAAAAGATCTTT
AGAAGAAAGCAGAATAACAAAGCATCGAGGGAATCTCGACTGCGCAAAAA
AGAAGAATTTCAACGACTTTTAGAAGAGCAACATTTGAAAGAAAAACGAA
AAAAGGACTTAGAGAATGAAGTCGCTCATCTACAAGGCGGAATCGAGGAG
CTTTACGCATCGCAAGAAAGAACTTTAGAAACTGCAATTCAGGGAAATCC
AAATGTTTCTCTACCTTTGTTTCTTGAACAATTATTGCAACTTATTCGTC
AAAGTGCCATCGAGAAAAACTCGACGGGTGAGGTTTACTCTAAGACAATC
GAGAACGTTATTAAAATTTATCAAAGAATAATGGAAAGAAATTTTGGTAA
GGAGGAAAAAGTGATGGTTCGTGAATGGCTTCAATCTCACTTGGTCAGTA
CAAACAATAGTTTTTGAATGTTGTGTTATCCGTATAATGAGTATATCATT
AATCCTTTAGAAATCTGTACAATCTATGGTCAACACCATGAGGAGATTGG
CAGGCAATTTCATCCAGTAGATAATTGCAATTATTTTTTGGGCGATTATG
AAGATGCACTGAAAAATGAATTTCCAGTTGGGATATTTGCTGCGCAAAAT
GAACGGAGTGATGAAGATATCAAGTTTGTTCAAGGAATAAAGCAAAGACT
GATCGCCGATTGTGACGAGATCTTTGAAAGAGAAAATTCAACAAATTTGC
AAGCACTGAGCCACGATTCAAGTAATCAGGAACTAATTGGCTTCACTGAA
CTTGTAAATTCAGGCGACAAATGGTTATGTAGTGATCAAGAGTCTTCAAC
TTTTAGCTCGTCAACTTTTGAAGATATTCTCGATGAATGCTCGGATTTGT
TTTGTTACGACGTACCTGTTGTGAGACAGACCTTCAATAGCGAACAAGAA
GGTACTCCCTCTAATAATCAACCCATGGATCCAGACTTGAACCCAGTCAT
TGCATCGACCAGTACATCAATTGAAATACAAGATGTCAGTGGGATTTTGA
ATAGTATACATCCAAATCTTTTGTTTGACTTTGCTTCAAAATCGAACAGT
GCTTCTTCTGAAGACTTTAAGTGTTCAAAAGATGAAATGTTGAAAACTAG
AGACAAAAAGATCTTTAGAAGAAAGCAGAATAACAAAGCATCGAGGGAAT
CTCGACTGCGCAAAAAAGAAGAATTTCAACGACTTTTAGAAGAGCAACAT
TTGAAAGAAAAACGAAAAAAGGACTTAGAGAATGAAGTCGCTCATCTACA
AGGCGGAATCGAGGAGCTTTACGCATCGCAAGAAAGAACTTTAGAAACTG
CAATTCAGGGAAATCCAAATGTTTCTCTACCTTTGTTTCTTGAACAATTA
TTGCAACTTATTCGTCAAAGTGCCATCGAGAAAAACTCGACGGGTGAGGT
TTACTCTAAGACAATCGAGAACGTTATTAAAATTTATCAAAGAATAATGG
AAAGAAATTTTGGTAAGGAGGAAAAAGTGATGGTTCGTGAATGGCTTCAA
TCTCACTTGGTCAGTACAAACAATAGTTTTTGAATGTTGTGTTATCCGTA
TAATGAGTATATCATTAATCCTTTAGAAATCTGTACAATCTATGGTCAAC
ACCATGAGGAGATTGGCAGGCAATTTCATCCAGTAGATAATTGCAATTAT
TTTTTGGGCGATTATGAAGATGCACTGAAAAATGAATTTCCAGTTGGGAT
ATTTGCTGCGCAAAATGAACGGAGTGATGAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000007_pilon | genome | sc0000007_pilon:933283..936499 - |
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