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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000118_pilon:206381..209726+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14271.5.p1 ID=MSTRG.14271.5.p1|Name=MSTRG.14271.5.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3346bp|location=Sequence derived from alignment at sc0000118_pilon:206381..209726+ (Clytia hemisphaerica_ch_hm2_pilon)
AGGTACAATACACCTTATCAAGAaataaatgattttgaaataaacagGGA
TCAAATTGACTGTTAAAATATACCCAGAAGAGGAAAAGGACGACGTCGTT
TTTGAATTCATTATCAATTCGTCTATTCAACTTGTTCTTGAACTGTTCCg
taagtgaattttgacttcaaaagttatgaaacCCGATTTTCTGGGTCTAT
GGAAGATTGGAatactttttttgcttatagGAtttttttttACCCTTCAG
TTCCATGagctttgcactttttgaaaagattttttaaagagtCGTCTTTC
TTTAGCAATAGCCATTACAGAAGGGTTTATACCGGCTCTAAACTATCCtg
ctttcatcaaattttatgatttatgataTCGGCCGTTAACTATGGGTACC
TCAGGAAGCCGTCTAGCGTTGTTTGACAAATGAATGTAATATTGGCGGAA
ATCCCCCGCATtaatattcttttaaaatttaaggaaGAAAGGAAATATGG
AGACTTGCTGTGAATATTTTTGGAGCAGTTTATGTATAAGCTTGACTACG
CTTTATTTCCTCGTTAATTTCATTGTGGATCATTGGATTTCAACCGAAga
gaagaaaaatgttttggtgACAGGCTGTGATTctggttttggttttcaaa
cagCTTTAGAATTAAGTGAATCTAATTGTAAAGTTTTTGCTGGTTGTTTA
ACCAATGATGGTGTCAAGCAACTTGAGAGTGATTTGAGGTTTCAAGGGAT
AGCTTTTATTCTTGACGTGACCAAAGACGAGGATGTTCAAAAAGCAAAGG
AAATGATCGAACGAAATGGAGGTATATAAACttttcttaactcgaaccaT
TTTCTGTATCTTCCCGAACTATTTTTTGTTCCCAATTACACATCTTTTTA
TAAGCAGTTTTCTAAGACTAGAAGGCTCAAATTAGCCTAAGTTTTTTCAC
TACCTCATAgaataaaagctttttagatgtAAAATCATGGTAGACGATAG
gccttgacccaataagcataaatatggtataatatccgGGGTGGTGAAag
ctattttttagaaaatgagctagaatgctaagcaaccttAGCCTTGGCCC
GAAAATTAgagttgcttataagaaaattgttataaaatatccaaatttta
taaattttccaTGGTATTTATTTGCAGGATTACATGGTCTAGTAAACAAC
GCAGGCATTGCTATACCAGGATTGATCGAATGGCAATCTATCGATTTGAT
GAAGAAAACATTTGAAGTGAACTATTGGGGAACTGTTCGTGTTACCAAAG
TCATGCTACCATTATTGAAAAAGTCATGTGGTCGTATCGTCAATGTGACA
AGCATGGGAGGTACAAATTAGTTAACtttgtaaaatgaaaaatactgtAG
AtgtatccaaaaaaaatttatgtccAGTATTTCTTTAAACTTAATAAATG
TTAATATCAAATCAATCTACTCAAAATTCTCTTTCCAACGGATTATTACA
GTCATTACTTTGAGTCGTTTCTTCTCTCTTAAAAAACAATGTATATAAAT
TTTCGTATAAAGTGGaatctccctaattcgaacttctattattcgaacta
tTTCAGTTCTTATCAGGAAAAAACCCTCGTAAACTACTTgttataattcg
aatgtttctataattcgaaaaaattagaCTATCCCCAGCTCGACTTTGAA
TTAGCAAGAGCTAACTGTGTTTCATTAGTAATGTTTAttaaccttttttt
cttttttcaggaagattATCTGTGCCTTATGGAGCTCCCTACTTCAGTTC
AAAGTATGCAGCTGAGGCGTTTTCTGATAGCTTACGTCTCGAAGTCAAAC
CATGGGGTGTTTCCGTGCATTTAATCGAACCCACGTACTACAAAACTAAT
TTGGCTGGTACAAAAGAGCTAAAGAAAGTTTGGTTTAATATTTGGGATCA
ACTACCACAAGAAACACATGATGAATTTGGAAAAGAACCTTTCGAGaatt
gtgagtattttggtGATCAATGTCTCATCTTTCTTAACTAACACCCCTTG
TTTTTTATGCAAAGAAATTTCGAAAAGGTAAAACGGGGGTCACTTTATAT
CTTAAAATATATCGGAGCAATCCTTCGAGTGTGTGTGTTTTGGAGAGGGT
TTATGGAATTTTACAACGTACCTGCATAAATGTTGTCAATGTGGATCCTT
CTTGTATTGTTTACGGCTCAAAAATCTGGTTgggattttcaaaattataa
ttcTGGCTTTCCCACAAGGGATAACAGTTCAGTGTAGTTTACTGCAAAAG
GGATTTCTAATTTCAGGCTATTATCCTCATCGGAATGGTTATTCTGCCAG
AGAGGCTGATGAATGTTTGTCATATATTCGCCGAAtcttttttacataat
ttttacTTTAGTTGTGGATGGTGTTTTGAAAAGCATAAAATATGGCGATG
ACATATCAGAGGTTTCTGGCAAAATCAGACATGCAATGTTGGCACGTTTT
CCAAGAAGACGTTACATTGTAGGGAAAGATTCGATTGTTTTTGCCATTAT
AACGCATCTTCCGACAGTTGTTGGTGATTGGATTTTCTCGAATATGGCAC
CTTTGCTTCGACCAAAGAAAACAGTGGAGTAGTTAGATTTGTATGTATTT
GAAGAACAAGTATTACTATACAACCttggatattttttatgaaacaaaTA
TACAGGGGTGTACGCATTCTGATTTGTTCATCACAGTAGACAGCCGCTGG
TCTCCCGAGGGAAACTCAATACTAGAACCTCCGTAACTCAAACACTTTTC
GTGACTTTTCTTAgcagcttgataattttttataagaagagaATACGTTT
ATAGCCTTTTTTgcctagtctacacaatagacagcccCAGGCTTTTACGC
TCGAagcgaaggaagatatgacgtagcctacttTGCCATTTTGTAAAACT
AACTACCGTGAGCACTACAGTTGAGCTATCTCTGAAACTTAACCTGTGAC
GACGGATTGTaagaattttatcgcgcatgtctcAATCATGTAAGATTATA
CATCTTGTCACTAGGACGATTCTTTTTGCGTTTGAGtttatagaaaattt
caaatgaatCTTATGAAAATTTAGGTAATTGTATTTTATATCTCATATAT
TGATCTAGTTCTTATTATCTTGTAGTTAGTTAGATTTTAAATACTTAGct
tataatttcaataaaattattaACGTGTGTCACATTTAAAACTTCgacta
tttaaaaaatttgttttataaccATTCGATATCTACAATAGAGGACTAAT
GGCCACCATGAAATATATTCACGTTTCAAGCACCCCTTTCAGCGCG Coding sequence (CDS) from alignment at sc0000118_pilon:206381..209726+ >MSTRG.14271.5.p1 ID=MSTRG.14271.5.p1|Name=MSTRG.14271.5.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3876bp|location=Sequence derived from alignment at sc0000118_pilon:206381..209726+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGACTTGCTGTGAATATTTTTGGAGCAGTTTATGTATAAGCTTGAC
TACGCTTTATTTCCTCGTTAATTTCATTGTGGATCATTGGATTTCAACCG
AAgagaagaaaaatgttttggtgACAGGCTGTGATTctggttttggtttt
caaacagCTTTAGAATTAAGTGAATCTAATTGTAAAGTTTTTGCTGGTTG
TTTAACCAATGATGGTGTCAAGCAACTTGAGAGTGATTTGAGGTTTCAAG
GGATAGCTTTTATTCTTGACGTGACCAAAGACGAGGATGTTCAAAAAGCA
AAGGAAATGATCGAACGAAATGGAGGATTACATGGTCTAGTAAACAACGC
AGGCATTGCTATACCAGGATTGATCGAATGGCAATCTATCGATTTGATGA
AGAAAACATTTGAAGTGAACTATTGGGGAACTGTTCGTGTTACCAAAGTC
ATGCTACCATTATTGAAAAAGTCATGTGGTCGTATCGTCAATGTGACAAG
CATGGGAGgaagattATCTGTGCCTTATGGAGCTCCCTACTTCAGTTCAA
AGTATGCAGCTGAGGCGTTTTCTGATAGCTTACGTCTCGAAGTCAAACCA
TGGGGTGTTTCCGTGCATTTAATCGAACCCACGTACTACAAAACTAATTT
GGCTGGTACAAAAGAGCTAAAGAAAGTTTGGTTTAATATTTGGGATCAAC
TACCACAAGAAACACATGATGAATTTGGAAAAGAACCTTTCGAGaattTT
GTGGATGGTGTTTTGAAAAGCATAAAATATGGCGATGACATATCAGAGGT
TTCTGGCAAAATCAGACATGCAATGTTGGCACGTTTTCCAAGAAGACGTT
ACATTGTAGGGAAAGATTCGATTGTTTTTGCCATTATAACGCATCTTCCG
ACAGTTGTTGGTGATTGGATTTTCTCGAATATGGCACCTTTGCTTCGACC
AAAGAAAACAGTGGAGTAGATGGAGACTTGCTGTGAATATTTTTGGAGCA
GTTTATGTATAAGCTTGACTACGCTTTATTTCCTCGTTAATTTCATTGTG
GATCATTGGATTTCAACCGAAgagaagaaaaatgttttggtgACAGGCTG
TGATTctggttttggttttcaaacagCTTTAGAATTAAGTGAATCTAATT
GTAAAGTTTTTGCTGGTTGTTTAACCAATGATGGTGTCAAGCAACTTGAG
AGTGATTTGAGGTTTCAAGGGATAGCTTTTATTCTTGACGTGACCAAAGA
CGAGGATGTTCAAAAAGCAAAGGAAATGATCGAACGAAATGGAGGATTAC
ATGGTCTAGTAAACAACGCAGGCATTGCTATACCAGGATTGATCGAATGG
CAATCTATCGATTTGATGAAGAAAACATTTGAAGTGAACTATTGGGGAAC
TGTTCGTGTTACCAAAGTCATGCTACCATTATTGAAAAAGTCATGTGGTC
GTATCGTCAATGTGACAAGCATGGGAGgaagattATCTGTGCCTTATGGA
GCTCCCTACTTCAGTTCAAAGTATGCAGCTGAGGCGTTTTCTGATAGCTT
ACGTCTCGAAGTCAAACCATGGGGTGTTTCCGTGCATTTAATCGAACCCA
CGTACTACAAAACTAATTTGGCTGGTACAAAAGAGCTAAAGAAAGTTTGG
TTTAATATTTGGGATCAACTACCACAAGAAACACATGATGAATTTGGAAA
AGAACCTTTCGAGaattTTGTGGATGGTGTTTTGAAAAGCATAAAATATG
GCGATGACATATCAGAGGTTTCTGGCAAAATCAGACATGCAATGTTGGCA
CGTTTTCCAAGAAGACGTTACATTGTAGGGAAAGATTCGATTGTTTTTGC
CATTATAACGCATCTTCCGACAGTTGTTGGTGATTGGATTTTCTCGAATA
TGGCACCTTTGCTTCGACCAAAGAAAACAGTGGAGTAGATGGAGACTTGC
TGTGAATATTTTTGGAGCAGTTTATGTATAAGCTTGACTACGCTTTATTT
CCTCGTTAATTTCATTGTGGATCATTGGATTTCAACCGAAgagaagaaaa
atgttttggtgACAGGCTGTGATTctggttttggttttcaaacagCTTTA
GAATTAAGTGAATCTAATTGTAAAGTTTTTGCTGGTTGTTTAACCAATGA
TGGTGTCAAGCAACTTGAGAGTGATTTGAGGTTTCAAGGGATAGCTTTTA
TTCTTGACGTGACCAAAGACGAGGATGTTCAAAAAGCAAAGGAAATGATC
GAACGAAATGGAGGATTACATGGTCTAGTAAACAACGCAGGCATTGCTAT
ACCAGGATTGATCGAATGGCAATCTATCGATTTGATGAAGAAAACATTTG
AAGTGAACTATTGGGGAACTGTTCGTGTTACCAAAGTCATGCTACCATTA
TTGAAAAAGTCATGTGGTCGTATCGTCAATGTGACAAGCATGGGAGgaag
attATCTGTGCCTTATGGAGCTCCCTACTTCAGTTCAAAGTATGCAGCTG
AGGCGTTTTCTGATAGCTTACGTCTCGAAGTCAAACCATGGGGTGTTTCC
GTGCATTTAATCGAACCCACGTACTACAAAACTAATTTGGCTGGTACAAA
AGAGCTAAAGAAAGTTTGGTTTAATATTTGGGATCAACTACCACAAGAAA
CACATGATGAATTTGGAAAAGAACCTTTCGAGaattTTGTGGATGGTGTT
TTGAAAAGCATAAAATATGGCGATGACATATCAGAGGTTTCTGGCAAAAT
CAGACATGCAATGTTGGCACGTTTTCCAAGAAGACGTTACATTGTAGGGA
AAGATTCGATTGTTTTTGCCATTATAACGCATCTTCCGACAGTTGTTGGT
GATTGGATTTTCTCGAATATGGCACCTTTGCTTCGACCAAAGAAAACAGT
GGAGTAGATGGAGACTTGCTGTGAATATTTTTGGAGCAGTTTATGTATAA
GCTTGACTACGCTTTATTTCCTCGTTAATTTCATTGTGGATCATTGGATT
TCAACCGAAgagaagaaaaatgttttggtgACAGGCTGTGATTctggttt
tggttttcaaacagCTTTAGAATTAAGTGAATCTAATTGTAAAGTTTTTG
CTGGTTGTTTAACCAATGATGGTGTCAAGCAACTTGAGAGTGATTTGAGG
TTTCAAGGGATAGCTTTTATTCTTGACGTGACCAAAGACGAGGATGTTCA
AAAAGCAAAGGAAATGATCGAACGAAATGGAGGATTACATGGTCTAGTAA
ACAACGCAGGCATTGCTATACCAGGATTGATCGAATGGCAATCTATCGAT
TTGATGAAGAAAACATTTGAAGTGAACTATTGGGGAACTGTTCGTGTTAC
CAAAGTCATGCTACCATTATTGAAAAAGTCATGTGGTCGTATCGTCAATG
TGACAAGCATGGGAGgaagattATCTGTGCCTTATGGAGCTCCCTACTTC
AGTTCAAAGTATGCAGCTGAGGCGTTTTCTGATAGCTTACGTCTCGAAGT
CAAACCATGGGGTGTTTCCGTGCATTTAATCGAACCCACGTACTACAAAA
CTAATTTGGCTGGTACAAAAGAGCTAAAGAAAGTTTGGTTTAATATTTGG
GATCAACTACCACAAGAAACACATGATGAATTTGGAAAAGAACCTTTCGA
GaattTTGTGGATGGTGTTTTGAAAAGCATAAAATATGGCGATGACATAT
CAGAGGTTTCTGGCAAAATCAGACATGCAATGTTGGCACGTTTTCCAAGA
AGACGTTACATTGTAGGGAAAGATTCGATTGTTTTTGCCATTATAACGCA
TCTTCCGACAGTTGTTGGTGATTGGATTTTCTCGAATATGGCACCTTTGC
TTCGACCAAAGAAAACAGTGGAGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000118_pilon | genome | sc0000118_pilon:206381..209726 + |
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