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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000104_pilon:186167..188819+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13234.1.p1 ID=MSTRG.13234.1.p1|Name=MSTRG.13234.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2653bp|location=Sequence derived from alignment at sc0000104_pilon:186167..188819+ (Clytia hemisphaerica_ch_hm2_pilon)
ATTCCTTGTTCGGAAggcgttgttgttgttgttagttgttttgtgttttt
tttcgatCTTGACATGGAAAGATCAGTTCATTTAAAAGTTCATCCTTACT
TTTCTTCAATTAATGTTATAATCTACCAAACAAAAAACCCTCCTGGTGGT
ATCCTATCAATTAAAAGAGAGATTGagacagaaaatctttttaatggTGT
ACCAGCAAAAGAAATGCTGTTTTTTGGAGAAAGAGATTCGGTGACACCTT
TAAAAGATAATACAAGATTTCATAAACATGGGGAAGTCGTAATATACCTT
TGTTATGCTAAAGCATTTGAGTTGTTGAATTCTGCTAACGAGAATGTGAC
TTTGGAGAAGGAAGTTAACAATTTTggtcaatcaataatcaaagtaaaag
cttttgggACCAATcgttttgtattttacatgtctGCTGCCCAGCATCAG
GCTGATAATGTGAAAGGTAACATTGAacgtacccagctggcacacaacgt
tgttttgacgtttgtctaacgttcacaacgtccatataacgttatatgaa
cgttgaaacaacgttgtgtgccagacGGGTAAGATTGGAATCCCATCTAA
AAATCTTATCttgttttataaaagaaatgatGCTTTATCCAATGAATTCT
CAAGATATTACGGatcttataataataataataatgatagcACTGCAATA
TACGTAATGGCATATTGCGATGGAGACTCTCATTTTAATCATACATGTCA
AAAATTTGGAATTAAATACATTGGTCCACTCAAGATTCGTTCCTTAACTA
TGGAGGACACTCTAACCGATATTCCTCACATTGACTCAGTGGTAGACGTC
AAAAGATATATCCGTGAAAGACAAAATATACCGATATACAGACAAACCTT
GATGTTTCAAGGAGATTCAATCGATAATGACCTTGAACATATTTCCAGTA
TTTTCTTGAAAGTTGATTCAGAAAAAGAATTTATATTTAATTTGTTGATC
ACCAATTTAGACCAGCCTTTTGATGTCAAAATAAGATATACATATCATAT
TAATTTGTATGCACCTGTTACCATTCAAATCTCTGACACTGTTGCTATTA
TCAAACTCAAATTCCTAGAAGAACATAACCCACGACTTAGCATTAGGCCA
TTCGGTCAGAATCTAcaagaaaatatcaagaaatataAACTCGATCCTAG
ACCACTGGATTGCTACAAACTCCACCTTGGCAACGAGACATTAGAATTAG
AGAATAACAAAACTGCTCAGGATTACAATCTCGATTCTTACAGTGAACTG
GTCTTGACAAAAAGTAAATTAATAAGATTCCATTTCAAAAACAGTGAAAA
CGTTATTGAAAAATCTATATCGATTTGGCCTGGTATAACTGATGCACGTG
AAGAATATAAAAACTTCAAGACAACATTGTGAAGCTTTTGTAAGGAATAT
TCAGTCAGGAAGAAGAATATTCGAATTATACTCGAATCAAGTGAAGATGT
TATTGAAAAACCATTGGAAAGCTTTAAGCATTGGGAAGGTTATGGTTGTC
GGAGCAAAGACATTATAAACCTAACGATATTGAGGCCTAAATCGTCGTGT
GGCATTTTGTAAAAGTTGCATTTTAGGattcttgtttttgatttttttaa
actagtattaaacattgcgcgaaccacgtgtcattaaagagaacaattaa
aatcacgtgtccaaaacaaacttgtataacaattagccaatcaaaattag
ccatatttcgtttgattttttattttgacatgtgacatttgttttgatta
tgtATCCACTGcgtacagtttgtttacaaatttcacaaGTATTTTTATTT
CCCTTTAAAGCAGGTGCAGgcacaaattaaaaaaaatgatttcttttacA
GATATTGTTTTATTAatccctttttttaaagatcatCACTAGTATTCTGC
CGTAATCTTCAAACAGATCCTGATTACTCTGTGTGGCACGTATTCACATT
AAAGgccatggctccgtaagagaacTTGGTCATATAATGCGTAGAATTAG
AATTGATGATCAGTTATGGGATTAAGTCTGCtgtatttctattatttgat
gCAGCTAAACAAAAGATTGTCTTGGAACGttgcacccggggggggggggt
actagggcatgatgggttacagggatgctccgctggtcagggtacctttt
ttaacctccacgagtcccaggtagggtcgcaaaaacaccaaaatagaaaa
atcagtccctcgtagggtgcctatttttggaaaatttgggaaagaagtag
aaaatttgagaaaattttggaatttcagtcccattcagggtcactttttt
cgcaaatttcgagtcccacgtagggtccatttttcgaacctcagaggagc
acccccgtcggtcgacaagggcaGTACCCCCCGGGCGTTGCACTTATTCA
AGAATATAATCTATTGCTTCAGAATGAGAATTTTTGTACCGAGCTAATAA
CTAAACTGTCTAAAAGTCTGCCTGGACACTTCACCTTTTTAACAATCTAT
CAACATGCATTTATGCTTTATTCAAAAGCtgtacaccgttggaaagatat
ttccataGAGTTGATCTAAtagattaaaaatttttgaaaaagaaaaatga
agg Coding sequence (CDS) from alignment at sc0000104_pilon:186167..188819+ >MSTRG.13234.1.p1 ID=MSTRG.13234.1.p1|Name=MSTRG.13234.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=726bp|location=Sequence derived from alignment at sc0000104_pilon:186167..188819+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCATATTGCGATGGAGACTCTCATTTTAATCATACATGTCAAAAATT
TGGAATTAAATACATTGGTCCACTCAAGATTCGTTCCTTAACTATGGAGG
ACACTCTAACCGATATTCCTCACATTGACTCAGTGGTAGACGTCAAAAGA
TATATCCGTGAAAGACAAAATATACCGATATACAGACAAACCTTGATGTT
TCAAGGAGATTCAATCGATAATGACCTTGAACATATTTCCAGTATTTTCT
TGAAAGTTGATTCAGAAAAAGAATTTATATTTAATTTGTTGATCACCAAT
TTAGACCAGCCTTTTGATGTCAAAATAAGATATACATATCATATTAATTT
GTATGCACCTGTTACCATTCAAATCTCTGACACTGTTGCTATTATCAAAC
TCAAATTCCTAGAAGAACATAACCCACGACTTAGCATTAGGCCATTCGGT
CAGAATCTAcaagaaaatatcaagaaatataAACTCGATCCTAGACCACT
GGATTGCTACAAACTCCACCTTGGCAACGAGACATTAGAATTAGAGAATA
ACAAAACTGCTCAGGATTACAATCTCGATTCTTACAGTGAACTGGTCTTG
ACAAAAAGTAAATTAATAAGATTCCATTTCAAAAACAGTGAAAACGTTAT
TGAAAAATCTATATCGATTTGGCCTGGTATAACTGATGCACGTGAAGAAT
ATAAAAACTTCAAGACAACATTGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000104_pilon | genome | sc0000104_pilon:186167..188819 + |
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